Wall clock time and date at job start Tue Mar 31 2020 11:03:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42908 * 114.00129 * 2 1 4 4 C 1.52992 * 109.47200 * 180.02562 * 3 2 1 5 5 N 1.46505 * 109.47216 * 64.99955 * 4 3 2 6 6 C 1.37092 * 120.00188 * 269.99747 * 5 4 3 7 7 H 1.08006 * 120.00090 * 138.65339 * 6 5 4 8 8 C 1.38948 * 120.00440 * 318.66022 * 6 5 4 9 9 N 1.31405 * 120.00602 * 160.62674 * 8 6 5 10 10 Si 1.86804 * 119.99572 * 340.62709 * 8 6 5 11 11 H 1.48494 * 109.47286 * 95.50528 * 10 8 6 12 12 H 1.48501 * 109.46737 * 215.50502 * 10 8 6 13 13 H 1.48501 * 109.47119 * 335.50021 * 10 8 6 14 14 C 1.34778 * 119.99913 * 90.00278 * 5 4 3 15 15 O 1.21299 * 119.99655 * 5.18042 * 14 5 4 16 16 C 1.50698 * 120.00085 * 185.18838 * 14 5 4 17 17 C 1.50701 * 109.47117 * 185.40528 * 16 14 5 18 18 C 1.38245 * 119.98139 * 265.68519 * 17 16 14 19 19 C 1.38179 * 120.04008 * 179.97438 * 18 17 16 20 20 C 1.38493 * 119.99975 * 0.02562 * 19 18 17 21 21 F 1.35104 * 120.01971 * 179.97438 * 20 19 18 22 22 C 1.38417 * 119.95986 * 359.70203 * 20 19 18 23 23 C 1.38331 * 119.95908 * 0.55556 * 22 20 19 24 24 Cl 1.73606 * 119.99741 * 179.74023 * 23 22 20 25 25 H 1.08999 * 109.47066 * 59.99753 * 1 2 3 26 26 H 1.08996 * 109.47113 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46698 * 299.99886 * 1 2 3 28 28 H 1.08996 * 109.46857 * 60.00311 * 3 2 1 29 29 H 1.08999 * 109.46869 * 300.00787 * 3 2 1 30 30 H 1.09006 * 109.47637 * 305.00413 * 4 3 2 31 31 H 1.09004 * 109.47142 * 184.99844 * 4 3 2 32 32 H 0.96994 * 120.00754 * 180.02562 * 9 8 6 33 33 H 1.09001 * 109.46838 * 65.40588 * 16 14 5 34 34 H 1.08994 * 109.46989 * 305.40474 * 16 14 5 35 35 H 1.08001 * 119.98445 * 359.97438 * 18 17 16 36 36 H 1.08005 * 120.00152 * 180.02562 * 19 18 17 37 37 H 1.08003 * 120.01720 * 180.31802 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 7 3.9757 0.5644 -1.2528 6 6 4.0970 -0.7985 -1.3370 7 1 3.7648 -1.3164 -2.2247 8 6 4.6470 -1.5138 -0.2804 9 7 4.4281 -2.8053 -0.1766 10 14 5.6979 -0.6393 0.9926 11 1 4.8568 -0.2695 2.1592 12 1 6.7908 -1.5415 1.4364 13 1 6.2815 0.5881 0.3941 14 6 4.2616 1.3338 -2.3218 15 8 4.2455 2.5425 -2.2208 16 6 4.6010 0.6924 -3.6426 17 6 5.0061 1.7574 -4.6288 18 6 4.0676 2.2942 -5.4903 19 6 4.4376 3.2712 -6.3948 20 6 5.7495 3.7128 -6.4389 21 9 6.1119 4.6676 -7.3234 22 6 6.6880 3.1794 -5.5725 23 6 6.3169 2.1976 -4.6714 24 17 7.4946 1.5231 -3.5889 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.6887 1.8464 0.8900 29 1 1.6886 1.8464 -0.8899 30 1 3.8515 0.5682 0.8409 31 1 3.9785 2.1766 0.0889 32 1 4.8118 -3.3046 0.5612 33 1 3.7295 0.1586 -4.0218 34 1 5.4247 -0.0080 -3.5053 35 1 3.0445 1.9498 -5.4565 36 1 3.7038 3.6904 -7.0672 37 1 7.7102 3.5267 -5.6026 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457205958.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:39 Heat of formation + Delta-G solvation = -93.766325 kcal Electronic energy + Delta-G solvation = -24318.352760 eV Core-core repulsion = 20422.952257 eV Total energy + Delta-G solvation = -3895.400504 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.89569 -39.59782 -38.49308 -37.03065 -36.20991 -34.80423 -32.35256 -31.92575 -30.85942 -29.58633 -26.92618 -25.77966 -24.59578 -23.04491 -22.69002 -21.41198 -19.01190 -17.77803 -17.06778 -16.62873 -16.45272 -15.82837 -15.63706 -15.52265 -15.25873 -14.68984 -14.54275 -14.32604 -14.01512 -13.78935 -13.63402 -13.37739 -12.97725 -12.55333 -12.44044 -11.91941 -11.80565 -11.58423 -11.47458 -11.30679 -11.16080 -10.93912 -10.90339 -10.77089 -10.55999 -10.11235 -9.92628 -9.20372 -9.09273 -8.89975 -8.69210 -8.31295 -7.74902 -6.39247 -4.01626 1.11411 1.18514 2.27833 3.08672 3.24398 3.32715 3.51244 3.68012 4.17968 4.27775 4.34064 4.46283 4.75696 4.91271 4.98666 5.07147 5.28344 5.56433 5.57902 5.64644 5.77011 5.82175 5.86191 5.91975 5.96241 5.98928 6.03347 6.08535 6.18131 6.28151 6.38176 6.46242 6.58690 6.82095 7.39298 7.78827 8.12811 8.27321 8.99971 9.36482 9.67810 10.71639 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.015996 B = 0.004826 C = 0.004091 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1749.973206 B = 5800.221013 C = 6842.842267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.356 6.356 3 C 0.056 3.944 4 C 0.101 3.899 5 N -0.455 5.455 6 C -0.331 4.331 7 H 0.102 0.898 8 C 0.077 3.923 9 N -0.858 5.858 10 Si 0.867 3.133 11 H -0.275 1.275 12 H -0.288 1.288 13 H -0.260 1.260 14 C 0.489 3.511 15 O -0.595 6.595 16 C -0.092 4.092 17 C -0.045 4.045 18 C -0.069 4.069 19 C -0.149 4.149 20 C 0.096 3.904 21 F -0.140 7.140 22 C -0.148 4.148 23 C 0.002 3.998 24 Cl -0.050 7.050 25 H 0.032 0.968 26 H 0.081 0.919 27 H 0.029 0.971 28 H 0.042 0.958 29 H 0.046 0.954 30 H 0.074 0.926 31 H 0.084 0.916 32 H 0.273 0.727 33 H 0.098 0.902 34 H 0.111 0.889 35 H 0.140 0.860 36 H 0.137 0.863 37 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.140 7.563 -7.309 10.579 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.273 6.273 3 C -0.022 4.022 4 C -0.022 4.022 5 N -0.176 5.176 6 C -0.458 4.458 7 H 0.119 0.881 8 C -0.130 4.130 9 N -0.493 5.493 10 Si 0.694 3.306 11 H -0.202 1.202 12 H -0.215 1.215 13 H -0.184 1.184 14 C 0.279 3.721 15 O -0.480 6.480 16 C -0.131 4.131 17 C -0.046 4.046 18 C -0.088 4.088 19 C -0.168 4.168 20 C 0.077 3.923 21 F -0.119 7.119 22 C -0.167 4.167 23 C -0.025 4.025 24 Cl -0.020 7.020 25 H 0.050 0.950 26 H 0.099 0.901 27 H 0.048 0.952 28 H 0.060 0.940 29 H 0.065 0.935 30 H 0.092 0.908 31 H 0.103 0.897 32 H 0.083 0.917 33 H 0.117 0.883 34 H 0.129 0.871 35 H 0.157 0.843 36 H 0.155 0.845 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.883 7.753 -7.066 10.527 hybrid contribution 0.402 0.540 0.837 1.074 sum -0.481 8.294 -6.230 10.384 Atomic orbital electron populations 1.22658 0.83106 1.02096 0.98672 1.88241 1.17588 1.26519 1.94985 1.22867 0.95003 0.85223 0.99116 1.21703 0.92061 0.99048 0.89376 1.43574 1.57853 1.07085 1.09040 1.18888 1.41632 0.78955 1.06366 0.88099 1.25221 0.95707 0.95001 0.97084 1.69733 1.40787 1.07599 1.31174 0.87077 0.80911 0.80610 0.81988 1.20180 1.21510 1.18429 1.20067 0.79467 0.86477 0.86126 1.90564 1.57442 1.14421 1.85609 1.20532 1.04527 0.96137 0.91923 1.19607 0.91164 0.97573 0.96305 1.20836 0.99422 0.94959 0.93548 1.21127 0.94604 0.99523 1.01523 1.17373 0.93475 0.90379 0.91079 1.91487 1.92415 1.61552 1.66422 1.20850 1.00569 0.98453 0.96837 1.20484 0.90844 0.97027 0.94098 1.98396 1.56883 1.83810 1.62951 0.94964 0.90066 0.95244 0.93981 0.93549 0.90847 0.89739 0.91711 0.88339 0.87102 0.84259 0.84479 0.84089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 11.01 101.05 1.11 1.61 16 2 O -0.36 -7.41 10.18 -35.23 -0.36 -7.77 16 3 C 0.06 1.08 6.28 37.15 0.23 1.31 16 4 C 0.10 2.21 4.66 -4.04 -0.02 2.19 16 5 N -0.46 -10.60 2.09 -114.81 -0.24 -10.84 16 6 C -0.33 -8.35 8.39 -14.94 -0.13 -8.48 16 7 H 0.10 2.65 7.52 -52.48 -0.39 2.25 16 8 C 0.08 2.02 5.33 -17.47 -0.09 1.93 16 9 N -0.86 -23.52 13.96 55.50 0.77 -22.75 16 10 Si 0.87 20.51 25.01 -169.99 -4.25 16.26 16 11 H -0.27 -6.33 6.73 56.52 0.38 -5.94 16 12 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 13 H -0.26 -6.23 7.11 56.52 0.40 -5.83 16 14 C 0.49 10.76 7.61 -10.99 -0.08 10.68 16 15 O -0.60 -14.03 15.60 5.54 0.09 -13.95 16 16 C -0.09 -1.70 4.03 -29.04 -0.12 -1.82 16 17 C -0.05 -0.75 4.38 -104.58 -0.46 -1.21 16 18 C -0.07 -0.98 9.68 -39.60 -0.38 -1.36 16 19 C -0.15 -1.90 10.03 -39.51 -0.40 -2.30 16 20 C 0.10 1.32 7.30 -39.42 -0.29 1.04 16 21 F -0.14 -1.87 17.27 2.25 0.04 -1.83 16 22 C -0.15 -2.11 9.81 -39.48 -0.39 -2.50 16 23 C 0.00 0.04 6.31 -39.51 -0.25 -0.21 16 24 Cl -0.05 -0.84 27.38 -51.86 -1.42 -2.26 16 25 H 0.03 0.46 8.14 -51.93 -0.42 0.03 16 26 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 27 H 0.03 0.39 8.14 -51.93 -0.42 -0.03 16 28 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.05 0.89 8.14 -51.93 -0.42 0.46 16 30 H 0.07 1.68 3.56 -51.93 -0.18 1.50 16 31 H 0.08 1.78 7.36 -51.93 -0.38 1.40 16 32 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 33 H 0.10 1.66 7.97 -51.93 -0.41 1.25 16 34 H 0.11 2.12 6.81 -51.93 -0.35 1.77 16 35 H 0.14 1.68 8.06 -52.49 -0.42 1.26 16 36 H 0.14 1.37 8.06 -52.48 -0.42 0.95 16 37 H 0.14 1.75 8.06 -52.48 -0.42 1.32 16 LS Contribution 333.65 15.07 5.03 5.03 Total: -1.00 -29.63 333.65 -5.86 -35.50 By element: Atomic # 1 Polarization: 6.00 SS G_CDS: -4.27 Total: 1.73 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -1.25 Total: 0.89 kcal Atomic # 7 Polarization: -34.12 SS G_CDS: 0.53 Total: -33.59 kcal Atomic # 8 Polarization: -21.45 SS G_CDS: -0.27 Total: -21.72 kcal Atomic # 9 Polarization: -1.87 SS G_CDS: 0.04 Total: -1.83 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -4.25 Total: 16.26 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.42 Total: -2.26 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -29.63 -5.86 -35.50 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457205958.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.271 kcal (2) G-P(sol) polarization free energy of solvation -29.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.864 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds