Wall clock time and date at job start Tue Mar 31 2020 11:03:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09004 * 109.46801 * 299.72165 * 5 3 2 7 7 N 1.46896 * 109.47652 * 179.72202 * 5 3 2 8 8 C 1.46900 * 111.00154 * 84.99800 * 7 5 3 9 9 C 1.52998 * 109.47075 * 180.02562 * 8 7 5 10 10 C 1.50698 * 109.47031 * 179.97438 * 9 8 7 11 11 H 1.07999 * 120.00199 * 359.97438 * 10 9 8 12 12 C 1.37875 * 120.00051 * 179.97438 * 10 9 8 13 13 N 1.31517 * 120.00190 * 359.97438 * 12 10 9 14 14 Si 1.86797 * 120.00095 * 179.97438 * 12 10 9 15 15 H 1.48501 * 109.47116 * 60.00178 * 14 12 10 16 16 H 1.48503 * 109.47080 * 179.97438 * 14 12 10 17 17 H 1.48499 * 109.47429 * 299.99877 * 14 12 10 18 18 C 1.50700 * 109.47039 * 59.71909 * 5 3 2 19 19 C 1.38259 * 119.97687 * 79.72776 * 18 5 3 20 20 C 1.38223 * 120.06297 * 179.76509 * 19 18 5 21 21 C 1.38315 * 120.00920 * 0.50929 * 20 19 18 22 22 Cl 1.73599 * 120.02270 * 179.76622 * 21 20 19 23 23 C 1.38550 * 119.95306 * 359.74926 * 21 20 19 24 24 F 1.35097 * 120.02981 * 180.02562 * 23 21 20 25 25 C 1.38202 * 119.97505 * 260.00072 * 18 5 3 26 26 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 27 27 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 28 28 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 29 29 H 1.00906 * 110.99879 * 321.04661 * 7 5 3 30 30 H 1.09002 * 109.46733 * 299.99955 * 8 7 5 31 31 H 1.08990 * 109.47030 * 60.00186 * 8 7 5 32 32 H 1.09002 * 109.47335 * 300.00061 * 9 8 7 33 33 H 1.09004 * 109.47526 * 59.99771 * 9 8 7 34 34 H 0.97000 * 120.00460 * 179.97438 * 13 12 10 35 35 H 1.08004 * 119.97018 * 0.02562 * 19 18 5 36 36 H 1.07992 * 119.99331 * 180.23153 * 20 19 18 37 37 H 1.07997 * 120.00723 * 0.02562 * 25 18 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 3.9595 0.7833 0.8836 7 7 3.9828 2.6837 -0.0117 8 6 4.0228 3.2261 1.3529 9 6 4.4591 4.6918 1.3065 10 6 4.4996 5.2484 2.7063 11 1 4.2397 4.6198 3.5452 12 6 4.8684 6.5603 2.9162 13 7 5.1854 7.3257 1.8948 14 14 4.9179 7.2504 4.6512 15 1 5.8842 6.4714 5.4665 16 1 5.3427 8.6727 4.6063 17 1 3.5669 7.1559 5.2604 18 6 4.1002 0.5885 -1.2370 19 6 4.0897 1.2451 -2.4536 20 6 4.5834 0.6190 -3.5827 21 6 5.0791 -0.6695 -3.4982 22 17 5.6937 -1.4585 -4.9172 23 6 5.0850 -1.3300 -2.2803 24 9 5.5692 -2.5884 -2.1960 25 6 4.5949 -0.6990 -1.1497 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3633 -1.0277 0.0005 29 1 3.3804 3.2366 -0.6030 30 1 3.0315 3.1565 1.8008 31 1 4.7325 2.6542 1.9505 32 1 5.4503 4.7619 0.8584 33 1 3.7491 5.2636 0.7089 34 1 5.4445 8.2487 2.0423 35 1 3.6991 2.2498 -2.5212 36 1 4.5781 1.1343 -4.5317 37 1 4.5984 -1.2130 -0.1999 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459621071.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:48 Heat of formation + Delta-G solvation = -114.036085 kcal Electronic energy + Delta-G solvation = -23418.366887 eV Core-core repulsion = 19522.087420 eV Total energy + Delta-G solvation = -3896.279466 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.13607 -40.89437 -39.33030 -37.18294 -36.72282 -35.58778 -33.31369 -31.82010 -30.90467 -29.16280 -28.21410 -26.07371 -23.91148 -23.20648 -22.61500 -20.74421 -20.61457 -18.19062 -17.58285 -17.08548 -16.89232 -16.62588 -16.36018 -16.19473 -15.92318 -15.07460 -14.45104 -14.35909 -14.13391 -13.96546 -13.56493 -13.47095 -13.16246 -12.96934 -12.52215 -12.44539 -12.25234 -11.98851 -11.76187 -11.54313 -11.20583 -11.14877 -10.97219 -10.91435 -10.74805 -10.60346 -10.14789 -9.52029 -9.24974 -9.19672 -8.81946 -8.43030 -8.27536 -6.02346 -4.05268 0.65605 0.86980 1.75900 2.06242 2.57822 3.20032 3.32291 3.36781 3.38887 3.78756 4.17859 4.39483 4.44513 4.52572 4.76501 4.84017 4.96526 4.98057 5.01633 5.07217 5.30178 5.33924 5.37030 5.56824 5.71309 5.80895 6.10188 6.13802 6.20494 6.27608 6.43066 6.83542 7.07127 7.47318 7.62239 7.67741 7.80805 7.99982 8.37275 9.00817 9.58533 11.09023 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.015166 B = 0.003109 C = 0.002783 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1845.844276 B = 9004.106897 C =10058.581122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.435 3.565 4 O -0.493 6.493 5 C 0.134 3.866 6 H 0.128 0.872 7 N -0.653 5.653 8 C 0.059 3.941 9 C 0.028 3.972 10 C -0.523 4.523 11 H 0.054 0.946 12 C 0.059 3.941 13 N -0.892 5.892 14 Si 0.894 3.106 15 H -0.276 1.276 16 H -0.287 1.287 17 H -0.277 1.277 18 C -0.032 4.032 19 C -0.089 4.089 20 C -0.082 4.082 21 C -0.073 4.073 22 Cl -0.055 7.055 23 C 0.108 3.892 24 F -0.128 7.128 25 C -0.122 4.122 26 H 0.063 0.937 27 H 0.062 0.938 28 H 0.099 0.901 29 H 0.352 0.648 30 H 0.027 0.973 31 H 0.064 0.936 32 H 0.027 0.973 33 H 0.017 0.983 34 H 0.262 0.738 35 H 0.143 0.857 36 H 0.145 0.855 37 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.639 -19.173 -10.798 22.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.273 6.273 3 C 0.274 3.726 4 O -0.379 6.379 5 C 0.021 3.979 6 H 0.145 0.855 7 N -0.285 5.285 8 C -0.068 4.068 9 C -0.009 4.009 10 C -0.562 4.562 11 H 0.072 0.928 12 C -0.142 4.142 13 N -0.531 5.531 14 Si 0.721 3.279 15 H -0.202 1.202 16 H -0.212 1.212 17 H -0.203 1.203 18 C -0.034 4.034 19 C -0.108 4.108 20 C -0.101 4.101 21 C -0.100 4.100 22 Cl -0.026 7.026 23 C 0.088 3.912 24 F -0.106 7.106 25 C -0.141 4.141 26 H 0.082 0.918 27 H 0.080 0.920 28 H 0.118 0.882 29 H 0.174 0.826 30 H 0.045 0.955 31 H 0.083 0.917 32 H 0.046 0.954 33 H 0.035 0.965 34 H 0.071 0.929 35 H 0.160 0.840 36 H 0.163 0.837 37 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.074 -18.930 -10.974 22.257 hybrid contribution -0.987 0.352 1.057 1.488 sum -5.062 -18.578 -9.918 21.659 Atomic orbital electron populations 1.23267 0.76706 1.03514 1.02611 1.86553 1.23244 1.33630 1.83887 1.25191 0.93225 0.81743 0.72419 1.90728 1.66483 1.36239 1.44420 1.20414 0.84821 0.94627 0.98087 0.85473 1.61121 1.53792 0.98526 1.15035 1.22377 0.99081 0.99931 0.85419 1.19039 0.97344 0.87344 0.97223 1.21083 1.46159 0.96346 0.92627 0.92772 1.24985 0.95255 0.97066 0.96941 1.69954 1.45772 1.07336 1.30044 0.86637 0.78443 0.77989 0.84797 1.20188 1.21243 1.20290 1.19298 0.97279 0.92692 0.94088 1.21075 0.98392 1.00452 0.90836 1.20959 0.97105 0.91878 1.00133 1.21017 1.05754 0.95538 0.87714 1.98383 1.86014 1.80135 1.38089 1.17236 1.00229 0.80836 0.92939 1.91537 1.85505 1.36741 1.96830 1.20934 1.00126 0.95033 0.98036 0.91844 0.91956 0.88233 0.82648 0.95490 0.91719 0.95446 0.96491 0.92870 0.83958 0.83711 0.83384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 10.56 101.05 1.07 1.38 16 2 O -0.36 -4.29 10.48 -39.26 -0.41 -4.70 16 3 C 0.43 6.08 7.07 36.00 0.25 6.33 16 4 O -0.49 -8.38 15.06 -18.76 -0.28 -8.67 16 5 C 0.13 1.76 2.70 -70.02 -0.19 1.57 16 6 H 0.13 1.50 7.66 -51.93 -0.40 1.10 16 7 N -0.65 -10.67 5.56 -109.19 -0.61 -11.28 16 8 C 0.06 1.18 5.32 -3.83 -0.02 1.16 16 9 C 0.03 0.71 5.23 -27.89 -0.15 0.56 16 10 C -0.52 -14.63 9.11 -34.44 -0.31 -14.94 16 11 H 0.05 1.46 7.74 -52.49 -0.41 1.05 16 12 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 13 N -0.89 -26.60 13.29 55.43 0.74 -25.86 16 14 Si 0.89 21.51 29.54 -169.99 -5.02 16.49 16 15 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 16 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 17 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 18 C -0.03 -0.38 4.87 -104.63 -0.51 -0.89 16 19 C -0.09 -0.98 9.31 -39.58 -0.37 -1.35 16 20 C -0.08 -0.82 9.83 -39.56 -0.39 -1.21 16 21 C -0.07 -0.79 6.33 -39.44 -0.25 -1.04 16 22 Cl -0.06 -0.56 28.62 -51.86 -1.48 -2.05 16 23 C 0.11 1.21 7.28 -39.39 -0.29 0.92 16 24 F -0.13 -1.49 16.84 2.25 0.04 -1.45 16 25 C -0.12 -1.29 9.65 -39.52 -0.38 -1.68 16 26 H 0.06 0.61 8.13 -51.93 -0.42 0.19 16 27 H 0.06 0.58 8.13 -51.93 -0.42 0.15 16 28 H 0.10 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.35 5.88 7.10 -39.29 -0.28 5.61 16 30 H 0.03 0.56 7.62 -51.93 -0.40 0.16 16 31 H 0.06 1.24 8.05 -51.93 -0.42 0.82 16 32 H 0.03 0.74 8.14 -51.93 -0.42 0.32 16 33 H 0.02 0.46 8.14 -51.93 -0.42 0.03 16 34 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 35 H 0.14 1.53 7.25 -52.48 -0.38 1.15 16 36 H 0.15 1.14 8.06 -52.49 -0.42 0.72 16 37 H 0.15 1.28 8.04 -52.49 -0.42 0.86 16 LS Contribution 343.93 15.07 5.18 5.18 Total: -1.00 -31.38 343.93 -7.85 -39.23 By element: Atomic # 1 Polarization: 5.07 SS G_CDS: -4.37 Total: 0.70 kcal Atomic # 6 Polarization: -5.96 SS G_CDS: -1.63 Total: -7.59 kcal Atomic # 7 Polarization: -37.27 SS G_CDS: 0.13 Total: -37.14 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -0.69 Total: -13.37 kcal Atomic # 9 Polarization: -1.49 SS G_CDS: 0.04 Total: -1.45 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.48 Total: -2.05 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -31.38 -7.85 -39.23 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459621071.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.811 kcal (2) G-P(sol) polarization free energy of solvation -31.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.849 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds