Wall clock time and date at job start Tue Mar 31 2020 10:54:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 N 1.46496 * 109.47307 * 2 1 4 4 C 1.37100 * 120.00029 * 263.55514 * 3 2 1 5 5 H 1.08001 * 119.99604 * 188.38779 * 4 3 2 6 6 C 1.38947 * 120.00167 * 8.39423 * 4 3 2 7 7 N 1.31413 * 120.00095 * 25.15793 * 6 4 3 8 8 Si 1.86805 * 120.00072 * 205.16409 * 6 4 3 9 9 H 1.48501 * 109.47257 * 84.98323 * 8 6 4 10 10 H 1.48499 * 109.46919 * 204.98723 * 8 6 4 11 11 H 1.48500 * 109.46867 * 324.98492 * 8 6 4 12 12 C 1.34774 * 120.00135 * 83.55913 * 3 2 1 13 13 O 1.21295 * 120.00625 * 180.02562 * 12 3 2 14 14 C 1.50704 * 119.99681 * 359.97438 * 12 3 2 15 15 C 1.53008 * 109.47099 * 180.02562 * 14 12 3 16 16 O 1.42901 * 109.47101 * 179.97438 * 15 14 12 17 17 C 1.35917 * 116.99923 * 179.97438 * 16 15 14 18 18 C 1.38759 * 120.02925 * 0.28313 * 17 16 15 19 19 C 1.38147 * 120.00096 * 180.24547 * 18 17 16 20 20 C 1.38334 * 120.06674 * 359.45096 * 19 18 17 21 21 Cl 1.73597 * 119.96952 * 180.27319 * 20 19 18 22 22 C 1.38573 * 120.06302 * 0.29369 * 20 19 18 23 23 F 1.35102 * 120.00313 * 179.97438 * 22 20 19 24 24 C 1.38366 * 119.99150 * 359.97438 * 22 20 19 25 25 H 1.08997 * 109.47587 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47354 * 300.00225 * 1 2 3 27 27 H 1.09005 * 109.46793 * 59.99705 * 1 2 3 28 28 H 1.09004 * 109.47047 * 240.00018 * 2 1 3 29 29 H 1.09001 * 109.47083 * 119.99901 * 2 1 3 30 30 H 0.96995 * 119.99801 * 179.97438 * 7 6 4 31 31 H 1.08999 * 109.47027 * 60.00288 * 14 12 3 32 32 H 1.08999 * 109.47166 * 300.00042 * 14 12 3 33 33 H 1.09001 * 109.46621 * 60.00016 * 15 14 12 34 34 H 1.08999 * 109.46980 * 299.99953 * 15 14 12 35 35 H 1.07997 * 119.99802 * 359.97313 * 18 17 16 36 36 H 1.07997 * 119.96286 * 179.72469 * 19 18 17 37 37 H 1.08007 * 120.03148 * 179.97438 * 24 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.3725 1.9830 -1.1798 5 1 2.8580 2.9477 -1.1694 6 6 2.1067 1.3520 -2.3889 7 7 1.1282 0.4788 -2.4732 8 14 3.1404 1.7447 -3.8945 9 1 4.3646 0.9041 -3.8874 10 1 2.3537 1.4633 -5.1221 11 1 3.5246 3.1789 -3.8707 12 6 2.1195 2.0602 1.1598 13 8 2.5234 3.2039 1.1598 14 6 1.7297 1.3987 2.4566 15 6 1.9377 2.3798 3.6122 16 8 1.5675 1.7527 4.8418 17 6 1.6937 2.4933 5.9745 18 6 2.1586 3.7987 5.9025 19 6 2.2915 4.5491 7.0548 20 6 1.9506 4.0044 8.2798 21 17 2.1118 4.9522 9.7253 22 6 1.4809 2.7029 8.3543 23 9 1.1488 2.1719 9.5514 24 6 1.3522 1.9471 7.2024 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 0.9425 0.0386 -3.3173 31 1 2.3482 0.5150 2.6140 32 1 0.6808 1.1053 2.4139 33 1 1.3189 3.2632 3.4545 34 1 2.9865 2.6736 3.6551 35 1 2.4209 4.2265 4.9462 36 1 2.6576 5.5636 6.9985 37 1 0.9866 0.9324 7.2598 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596918539.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:57 Heat of formation + Delta-G solvation = -90.086765 kcal Electronic energy + Delta-G solvation = -23127.192874 eV Core-core repulsion = 19231.951928 eV Total energy + Delta-G solvation = -3895.240946 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -49.22390 -40.34239 -38.77188 -37.71528 -36.45761 -35.23428 -32.27477 -31.61112 -30.81407 -29.61443 -29.36924 -25.64372 -23.99756 -23.26061 -22.33310 -21.79490 -19.04664 -18.65063 -17.09686 -16.96797 -16.81503 -16.38359 -16.31893 -15.86931 -15.80275 -14.65518 -14.43799 -14.25989 -14.21346 -14.05121 -13.26378 -13.18224 -12.85057 -12.72328 -12.55417 -12.44514 -12.07467 -11.84945 -11.50745 -11.30370 -11.24915 -11.09941 -10.93926 -10.81229 -10.53416 -10.39288 -10.19666 -9.90548 -9.25818 -8.99432 -8.54050 -8.41952 -7.87194 -6.45759 -3.87536 0.74125 0.83669 1.81437 2.85264 3.09476 3.17877 3.21172 3.25527 3.74351 3.89110 4.07272 4.38867 4.64023 4.77077 4.92558 4.95968 4.97507 5.20467 5.24297 5.39197 5.53439 5.59281 5.71744 5.80237 5.92544 5.98550 6.05746 6.19749 6.29014 6.50251 6.54691 6.69662 7.16880 7.18589 7.38753 7.65259 7.97990 8.39490 9.06915 9.33219 9.85976 10.54696 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.034082 B = 0.002356 C = 0.002229 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 821.344396 B =11879.955363 C =12560.320692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.117 3.883 3 N -0.434 5.434 4 C -0.310 4.310 5 H 0.106 0.894 6 C 0.032 3.968 7 N -0.863 5.863 8 Si 0.920 3.080 9 H -0.277 1.277 10 H -0.285 1.285 11 H -0.270 1.270 12 C 0.441 3.559 13 O -0.599 6.599 14 C -0.129 4.129 15 C 0.076 3.924 16 O -0.309 6.309 17 C 0.178 3.822 18 C -0.206 4.206 19 C -0.039 4.039 20 C -0.119 4.119 21 Cl -0.058 7.058 22 C 0.148 3.852 23 F -0.124 7.124 24 C -0.185 4.185 25 H 0.039 0.961 26 H 0.025 0.975 27 H 0.092 0.908 28 H 0.103 0.897 29 H 0.034 0.966 30 H 0.268 0.732 31 H 0.087 0.913 32 H 0.091 0.909 33 H 0.074 0.926 34 H 0.074 0.926 35 H 0.151 0.849 36 H 0.146 0.854 37 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.174 1.105 16.708 16.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.007 4.007 3 N -0.151 5.151 4 C -0.438 4.438 5 H 0.123 0.877 6 C -0.172 4.172 7 N -0.502 5.502 8 Si 0.747 3.253 9 H -0.203 1.203 10 H -0.211 1.211 11 H -0.194 1.194 12 C 0.230 3.770 13 O -0.486 6.486 14 C -0.169 4.169 15 C 0.002 3.998 16 O -0.222 6.222 17 C 0.130 3.870 18 C -0.225 4.225 19 C -0.058 4.058 20 C -0.147 4.147 21 Cl -0.029 7.029 22 C 0.128 3.872 23 F -0.102 7.102 24 C -0.204 4.204 25 H 0.058 0.942 26 H 0.044 0.956 27 H 0.110 0.890 28 H 0.121 0.879 29 H 0.053 0.947 30 H 0.079 0.921 31 H 0.105 0.895 32 H 0.110 0.890 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.168 0.832 36 H 0.164 0.836 37 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.136 1.378 16.649 16.707 hybrid contribution 0.319 0.077 -0.533 0.626 sum 0.182 1.456 16.116 16.183 Atomic orbital electron populations 1.22119 0.96522 1.00025 1.02074 1.21505 0.94648 0.83530 1.00977 1.43795 1.54604 1.11278 1.05433 1.19736 1.36329 1.05679 0.82009 0.87671 1.25217 0.95882 0.97043 0.99028 1.70109 1.24701 1.28523 1.26853 0.86035 0.79916 0.79256 0.80101 1.20295 1.21070 1.19437 1.19485 0.86068 0.86820 0.84660 1.90518 1.52772 1.18377 1.86922 1.21448 1.04019 0.99030 0.92426 1.22677 1.01222 0.96326 0.79591 1.86043 1.80853 1.41368 1.13903 1.18693 0.91967 0.89666 0.86653 1.21497 1.06598 0.94148 1.00304 1.20756 0.95603 1.00299 0.89114 1.20783 1.11660 0.92425 0.89837 1.98369 1.96687 1.71506 1.36362 1.16913 0.98903 0.90303 0.81064 1.91546 1.89780 1.86171 1.42719 1.20206 1.09175 1.02418 0.88632 0.94185 0.95638 0.88957 0.87925 0.94742 0.92123 0.89481 0.89028 0.90729 0.90762 0.83151 0.83623 0.82971 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.94 9.64 37.15 0.36 -2.58 16 2 C 0.12 2.45 5.07 -4.05 -0.02 2.43 16 3 N -0.43 -10.43 2.64 -114.81 -0.30 -10.73 16 4 C -0.31 -8.19 9.43 -14.93 -0.14 -8.33 16 5 H 0.11 2.95 7.31 -52.49 -0.38 2.57 16 6 C 0.03 0.79 4.90 -17.47 -0.09 0.70 16 7 N -0.86 -21.10 8.65 55.50 0.48 -20.62 16 8 Si 0.92 19.66 29.62 -169.99 -5.04 14.63 16 9 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 10 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 11 H -0.27 -5.85 7.11 56.52 0.40 -5.45 16 12 C 0.44 10.01 7.58 -10.98 -0.08 9.92 16 13 O -0.60 -15.38 15.58 5.54 0.09 -15.30 16 14 C -0.13 -2.20 4.68 -27.88 -0.13 -2.34 16 15 C 0.08 1.16 4.03 37.16 0.15 1.31 16 16 O -0.31 -4.29 10.14 -19.48 -0.20 -4.48 16 17 C 0.18 2.20 6.68 -39.23 -0.26 1.94 16 18 C -0.21 -2.33 9.04 -39.42 -0.36 -2.68 16 19 C -0.04 -0.39 9.82 -39.58 -0.39 -0.78 16 20 C -0.12 -1.31 6.33 -39.42 -0.25 -1.56 16 21 Cl -0.06 -0.60 28.61 -51.86 -1.48 -2.08 16 22 C 0.15 1.70 7.27 -39.41 -0.29 1.41 16 23 F -0.12 -1.45 16.83 2.25 0.04 -1.41 16 24 C -0.18 -2.10 9.96 -39.38 -0.39 -2.49 16 25 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 26 H 0.02 0.46 6.45 -51.93 -0.34 0.13 16 27 H 0.09 2.11 6.38 -51.93 -0.33 1.78 16 28 H 0.10 2.34 5.83 -51.93 -0.30 2.04 16 29 H 0.03 0.62 6.71 -51.93 -0.35 0.27 16 30 H 0.27 6.24 8.31 -40.82 -0.34 5.91 16 31 H 0.09 1.36 7.42 -51.93 -0.39 0.97 16 32 H 0.09 1.49 6.41 -51.93 -0.33 1.16 16 33 H 0.07 1.14 7.61 -51.93 -0.40 0.75 16 34 H 0.07 1.12 7.63 -51.93 -0.40 0.72 16 35 H 0.15 1.64 6.30 -52.49 -0.33 1.31 16 36 H 0.15 1.15 8.06 -52.49 -0.42 0.73 16 37 H 0.15 1.51 8.06 -52.48 -0.42 1.09 16 LS Contribution 328.41 15.07 4.95 4.95 Total: -1.00 -27.64 328.41 -7.30 -34.94 By element: Atomic # 1 Polarization: 7.10 SS G_CDS: -3.94 Total: 3.16 kcal Atomic # 6 Polarization: -1.16 SS G_CDS: -1.89 Total: -3.05 kcal Atomic # 7 Polarization: -31.53 SS G_CDS: 0.18 Total: -31.36 kcal Atomic # 8 Polarization: -19.67 SS G_CDS: -0.11 Total: -19.78 kcal Atomic # 9 Polarization: -1.45 SS G_CDS: 0.04 Total: -1.41 kcal Atomic # 14 Polarization: 19.66 SS G_CDS: -5.04 Total: 14.63 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.48 Total: -2.08 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -27.64 -7.30 -34.94 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596918539.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.145 kcal (2) G-P(sol) polarization free energy of solvation -27.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds