Wall clock time and date at job start Tue Mar 31 2020 10:49:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45190 * 1 3 3 C 1.34228 * 117.00154 * 2 1 4 4 O 1.20832 * 119.99860 * 0.02562 * 3 2 1 5 5 C 1.50704 * 120.00329 * 180.02562 * 3 2 1 6 6 H 1.09000 * 109.47077 * 60.00052 * 5 3 2 7 7 N 1.46898 * 109.47279 * 180.02562 * 5 3 2 8 8 C 1.46893 * 111.00088 * 274.99814 * 7 5 3 9 9 H 1.09001 * 109.46941 * 324.99872 * 8 7 5 10 10 C 1.52997 * 109.47301 * 84.99976 * 8 7 5 11 11 C 1.50697 * 109.47491 * 205.00074 * 8 7 5 12 12 H 1.08004 * 119.99608 * 0.02562 * 11 8 7 13 13 C 1.37874 * 120.00332 * 179.97438 * 11 8 7 14 14 N 1.31515 * 119.99908 * 0.02562 * 13 11 8 15 15 Si 1.86802 * 119.99944 * 179.97438 * 13 11 8 16 16 H 1.48503 * 109.47164 * 60.00490 * 15 13 11 17 17 H 1.48503 * 109.47038 * 180.02562 * 15 13 11 18 18 H 1.48498 * 109.47254 * 300.00464 * 15 13 11 19 19 C 1.50710 * 109.46693 * 300.00379 * 5 3 2 20 20 C 1.38457 * 120.01787 * 285.23394 * 19 5 3 21 21 F 1.35108 * 120.02111 * 0.02562 * 20 19 5 22 22 C 1.38444 * 119.96240 * 180.27954 * 20 19 5 23 23 C 1.38234 * 119.99700 * 359.48325 * 22 20 19 24 24 C 1.38203 * 120.03957 * 0.25962 * 23 22 20 25 25 C 1.38288 * 120.01908 * 104.99772 * 19 5 3 26 26 Cl 1.73605 * 120.00205 * 359.95941 * 25 19 5 27 27 H 1.08999 * 109.47657 * 179.97438 * 1 2 3 28 28 H 1.09006 * 109.47226 * 299.99447 * 1 2 3 29 29 H 1.09001 * 109.47648 * 59.99763 * 1 2 3 30 30 H 1.00906 * 111.00058 * 151.04208 * 7 5 3 31 31 H 1.09004 * 109.47364 * 180.02562 * 10 8 7 32 32 H 1.09004 * 109.46953 * 299.99977 * 10 8 7 33 33 H 1.09001 * 109.47208 * 60.00059 * 10 8 7 34 34 H 0.97002 * 119.99909 * 179.97438 * 14 13 11 35 35 H 1.08002 * 120.00493 * 179.77011 * 22 20 19 36 36 H 1.08001 * 119.97638 * 180.23555 * 23 22 20 37 37 H 1.07997 * 119.97991 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9557 0.7810 -0.8908 7 7 3.9828 2.6836 0.0002 8 6 4.0169 3.2232 -1.3657 9 1 4.3403 2.4442 -2.0561 10 6 2.6190 3.7049 -1.7588 11 6 4.9818 4.3792 -1.4252 12 1 5.5165 4.6825 -0.5372 13 6 5.1826 5.0491 -2.6134 14 7 4.5318 4.6795 -3.6948 15 14 6.3781 6.4826 -2.6869 16 1 7.7350 6.0157 -2.3045 17 1 6.4127 7.0280 -4.0677 18 1 5.9368 7.5440 -1.7468 19 6 4.1056 0.5914 1.2296 20 6 4.0074 1.2094 2.4646 21 9 3.4276 2.4254 2.5678 22 6 4.5083 0.5831 3.5931 23 6 5.0966 -0.6635 3.4879 24 6 5.1898 -1.2827 2.2559 25 6 4.6943 -0.6556 1.1262 26 17 4.8115 -1.4347 -0.4208 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 4.8759 2.7964 0.4560 31 1 2.6442 4.1049 -2.7725 32 1 1.9211 2.8687 -1.7158 33 1 2.2956 4.4839 -1.0684 34 1 4.6729 5.1510 -4.5307 35 1 4.4354 1.0662 4.5563 36 1 5.4838 -1.1535 4.3690 37 1 5.6492 -2.2568 2.1749 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000602868872.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:49:45 Heat of formation + Delta-G solvation = -90.696390 kcal Electronic energy + Delta-G solvation = -25018.187507 eV Core-core repulsion = 21122.920126 eV Total energy + Delta-G solvation = -3895.267381 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -48.65236 -40.26127 -39.12114 -36.60194 -36.50804 -35.31168 -33.28153 -31.25285 -30.50191 -28.56018 -27.65228 -25.57841 -24.79941 -22.94976 -22.48102 -20.60593 -19.56191 -17.95475 -17.28245 -16.92618 -16.34198 -16.31450 -15.99725 -15.46714 -15.26903 -14.76617 -14.69857 -14.07383 -13.67789 -13.63149 -13.30241 -13.12072 -12.82768 -12.64070 -12.28090 -12.13332 -11.76660 -11.47465 -11.40696 -11.26277 -10.93360 -10.85295 -10.77720 -10.44205 -10.35744 -10.06116 -10.00966 -9.56085 -8.92229 -8.76503 -8.72317 -8.42190 -7.47526 -5.99795 -4.06857 0.84377 0.94651 1.97802 2.73194 3.00744 3.32753 3.33535 3.37525 3.40808 4.22023 4.40241 4.47569 4.65344 4.69356 5.03358 5.24378 5.26025 5.29431 5.32590 5.35479 5.38029 5.64352 5.70582 5.78154 5.88302 5.98570 6.02945 6.60955 6.73840 6.91119 7.29317 7.33491 7.50932 7.78858 7.91321 8.23945 8.29164 8.41475 8.56165 8.99782 9.58156 11.06122 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.013347 B = 0.005169 C = 0.004745 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2097.282357 B = 5415.248357 C = 5899.883390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.365 6.365 3 C 0.455 3.545 4 O -0.453 6.453 5 C 0.139 3.861 6 H 0.094 0.906 7 N -0.656 5.656 8 C 0.213 3.787 9 H 0.003 0.997 10 C -0.122 4.122 11 C -0.518 4.518 12 H 0.060 0.940 13 C 0.064 3.936 14 N -0.888 5.888 15 Si 0.898 3.102 16 H -0.278 1.278 17 H -0.287 1.287 18 H -0.276 1.276 19 C -0.119 4.119 20 C 0.141 3.859 21 F -0.106 7.106 22 C -0.159 4.159 23 C -0.076 4.076 24 C -0.128 4.128 25 C 0.009 3.991 26 Cl -0.047 7.047 27 H 0.095 0.905 28 H 0.058 0.942 29 H 0.060 0.940 30 H 0.344 0.656 31 H 0.073 0.927 32 H 0.017 0.983 33 H 0.034 0.966 34 H 0.262 0.738 35 H 0.142 0.858 36 H 0.141 0.859 37 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.163 -15.211 12.362 19.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.283 6.283 3 C 0.294 3.706 4 O -0.336 6.336 5 C 0.028 3.972 6 H 0.111 0.889 7 N -0.291 5.291 8 C 0.107 3.893 9 H 0.020 0.980 10 C -0.180 4.180 11 C -0.557 4.557 12 H 0.078 0.922 13 C -0.138 4.138 14 N -0.526 5.526 15 Si 0.726 3.274 16 H -0.203 1.203 17 H -0.213 1.213 18 H -0.202 1.202 19 C -0.122 4.122 20 C 0.121 3.879 21 F -0.084 7.084 22 C -0.178 4.178 23 C -0.095 4.095 24 C -0.147 4.147 25 C -0.018 4.018 26 Cl -0.018 7.018 27 H 0.113 0.887 28 H 0.076 0.924 29 H 0.079 0.921 30 H 0.165 0.835 31 H 0.092 0.908 32 H 0.035 0.965 33 H 0.053 0.947 34 H 0.071 0.929 35 H 0.160 0.840 36 H 0.159 0.841 37 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -2.074 -14.594 12.128 19.089 hybrid contribution 1.066 0.610 -0.623 1.377 sum -1.009 -13.983 11.505 18.136 Atomic orbital electron populations 1.23142 0.77341 1.02896 1.02311 1.86505 1.22563 1.34137 1.85055 1.23582 0.91619 0.81258 0.74100 1.90669 1.66096 1.35720 1.41101 1.19948 0.88268 0.93637 0.95395 0.88876 1.60485 1.35189 1.09357 1.24046 1.19304 0.94904 0.93976 0.81126 0.97986 1.21838 0.95375 0.98863 1.01918 1.21134 1.23529 1.15480 0.95560 0.92164 1.24890 0.96100 0.97313 0.95527 1.69904 1.41478 1.41040 1.00207 0.86561 0.81239 0.82592 0.76998 1.20319 1.21301 1.20166 1.19636 1.03046 0.94881 0.94615 1.17382 0.95560 0.82290 0.92712 1.91673 1.80826 1.39409 1.96481 1.21276 1.01520 0.96777 0.98200 1.20942 0.97243 0.93921 0.97357 1.21034 1.01689 1.01136 0.90840 1.20565 1.00253 0.92866 0.88128 1.98395 1.96570 1.79471 1.27355 0.88691 0.92366 0.92095 0.83513 0.90843 0.96453 0.94710 0.92857 0.84024 0.84119 0.84191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.49 10.55 101.05 1.07 1.55 16 2 O -0.37 -6.13 10.48 -39.25 -0.41 -6.54 16 3 C 0.46 9.04 6.49 36.01 0.23 9.28 16 4 O -0.45 -10.28 12.77 -18.75 -0.24 -10.52 16 5 C 0.14 2.70 2.40 -70.01 -0.17 2.53 16 6 H 0.09 1.84 5.66 -51.93 -0.29 1.55 16 7 N -0.66 -14.71 4.55 -103.40 -0.47 -15.18 16 8 C 0.21 5.60 2.60 -68.87 -0.18 5.42 16 9 H 0.00 0.07 7.43 -51.93 -0.39 -0.31 16 10 C -0.12 -3.29 8.01 37.16 0.30 -2.99 16 11 C -0.52 -14.49 8.59 -34.44 -0.30 -14.79 16 12 H 0.06 1.65 7.62 -52.48 -0.40 1.25 16 13 C 0.06 1.79 5.30 -17.82 -0.09 1.70 16 14 N -0.89 -25.83 11.32 55.43 0.63 -25.20 16 15 Si 0.90 21.61 29.54 -169.99 -5.02 16.59 16 16 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 17 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 18 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 19 C -0.12 -1.90 4.60 -104.52 -0.48 -2.38 16 20 C 0.14 2.12 6.81 -39.42 -0.27 1.85 16 21 F -0.11 -1.90 15.72 2.25 0.04 -1.86 16 22 C -0.16 -1.76 10.03 -39.51 -0.40 -2.15 16 23 C -0.08 -0.69 10.04 -39.60 -0.40 -1.08 16 24 C -0.13 -1.31 9.83 -39.54 -0.39 -1.69 16 25 C 0.01 0.13 6.31 -39.51 -0.25 -0.12 16 26 Cl -0.05 -0.64 27.08 -51.86 -1.40 -2.04 16 27 H 0.09 0.90 8.14 -51.93 -0.42 0.47 16 28 H 0.06 0.74 8.13 -51.93 -0.42 0.32 16 29 H 0.06 0.82 8.13 -51.93 -0.42 0.39 16 30 H 0.34 7.43 7.57 -39.29 -0.30 7.14 16 31 H 0.07 2.12 6.07 -51.93 -0.32 1.80 16 32 H 0.02 0.44 5.07 -51.93 -0.26 0.17 16 33 H 0.03 0.96 8.14 -51.93 -0.42 0.54 16 34 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 35 H 0.14 1.24 8.06 -52.49 -0.42 0.81 16 36 H 0.14 0.77 8.06 -52.49 -0.42 0.35 16 37 H 0.14 1.07 8.06 -52.49 -0.42 0.64 16 LS Contribution 328.79 15.07 4.95 4.95 Total: -1.00 -32.17 328.79 -7.30 -39.46 By element: Atomic # 1 Polarization: 7.27 SS G_CDS: -4.05 Total: 3.23 kcal Atomic # 6 Polarization: -1.56 SS G_CDS: -1.32 Total: -2.88 kcal Atomic # 7 Polarization: -40.54 SS G_CDS: 0.16 Total: -40.39 kcal Atomic # 8 Polarization: -16.41 SS G_CDS: -0.65 Total: -17.06 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.04 Total: -1.86 kcal Atomic # 14 Polarization: 21.61 SS G_CDS: -5.02 Total: 16.59 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.40 Total: -2.04 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -32.17 -7.30 -39.46 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000602868872.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.232 kcal (2) G-P(sol) polarization free energy of solvation -32.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.399 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds