Wall clock time and date at job start Tue Mar 31 2020 11:07:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.39064 * 120.32107 * 238.01228 * 3 2 1 5 5 Cl 1.73601 * 120.97166 * 0.25356 * 4 3 2 6 6 C 1.40798 * 118.06408 * 180.28162 * 4 3 2 7 7 C 1.40457 * 121.09407 * 179.97438 * 6 4 3 8 8 C 1.36189 * 119.65233 * 180.02562 * 7 6 4 9 9 C 1.39287 * 120.81593 * 0.02562 * 8 7 6 10 10 C 1.36166 * 121.06173 * 359.92783 * 9 8 7 11 11 C 1.40516 * 119.82807 * 0.09727 * 10 9 8 12 12 N 1.33864 * 120.70521 * 179.90019 * 11 10 9 13 13 C 1.31556 * 121.69816 * 180.02562 * 12 11 10 14 14 N 1.38300 * 119.33849 * 180.02562 * 13 12 11 15 15 C 1.46502 * 119.99507 * 359.97438 * 14 13 12 16 16 C 1.52997 * 109.46681 * 180.02562 * 15 14 13 17 17 C 1.53002 * 109.47182 * 180.02562 * 16 15 14 18 18 C 1.50695 * 109.47260 * 180.02562 * 17 16 15 19 19 H 1.08002 * 120.00342 * 359.97438 * 18 17 16 20 20 C 1.37874 * 120.00282 * 179.97438 * 18 17 16 21 21 N 1.31519 * 119.99710 * 0.02562 * 20 18 17 22 22 Si 1.86797 * 120.00497 * 179.97438 * 20 18 17 23 23 H 1.48500 * 109.46773 * 0.02562 * 22 20 18 24 24 H 1.48508 * 109.47134 * 120.00024 * 22 20 18 25 25 H 1.48501 * 109.47337 * 240.00008 * 22 20 18 26 26 H 1.08007 * 120.17289 * 0.04766 * 7 6 4 27 27 H 1.08001 * 119.59500 * 179.97438 * 8 7 6 28 28 H 1.07999 * 119.47128 * 179.97438 * 9 8 7 29 29 H 1.07996 * 120.08937 * 180.02562 * 10 9 8 30 30 H 0.96995 * 119.99839 * 179.97438 * 14 13 12 31 31 H 1.08996 * 109.46815 * 299.99734 * 15 14 13 32 32 H 1.08999 * 109.46966 * 60.00345 * 15 14 13 33 33 H 1.09004 * 109.47424 * 300.00043 * 16 15 14 34 34 H 1.08999 * 109.47525 * 59.99528 * 16 15 14 35 35 H 1.09000 * 109.46901 * 299.99734 * 17 16 15 36 36 H 1.08991 * 109.47029 * 59.99755 * 17 16 15 37 37 H 0.96998 * 120.00251 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 0.6369 1.0181 5 17 2.4356 1.4375 2.3131 6 6 4.6767 0.6133 0.9679 7 6 5.4486 1.2359 1.9625 8 6 6.8076 1.1955 1.8846 9 6 7.4428 0.5444 0.8297 10 6 6.7251 -0.0702 -0.1507 11 6 5.3208 -0.0501 -0.1061 12 7 4.5979 -0.6469 -1.0617 13 6 3.2826 -0.6397 -1.0395 14 7 2.5843 -1.2722 -2.0519 15 6 3.3097 -1.9409 -3.1350 16 6 2.3089 -2.5548 -4.1160 17 6 3.0664 -3.2538 -5.2468 18 6 2.0806 -3.8579 -6.2133 19 1 1.0199 -3.7542 -6.0384 20 6 2.5328 -4.5431 -7.3210 21 7 3.8245 -4.6699 -7.5338 22 14 1.3110 -5.2927 -8.5188 23 1 -0.0718 -5.0116 -8.0560 24 1 1.5116 -4.7006 -9.8659 25 1 1.5219 -6.7610 -8.5871 26 1 4.9668 1.7438 2.7851 27 1 7.4002 1.6749 2.6497 28 1 8.5218 0.5261 0.7892 29 1 7.2338 -0.5708 -0.9612 30 1 1.6144 -1.2731 -2.0449 31 1 3.9318 -1.2147 -3.6580 32 1 3.9400 -2.7268 -2.7190 33 1 1.6863 -3.2809 -3.5931 34 1 1.6787 -1.7687 -4.5318 35 1 3.6892 -2.5280 -5.7697 36 1 3.6961 -4.0399 -4.8305 37 1 4.1426 -5.1516 -8.3132 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001157642199.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:07:43 Heat of formation + Delta-G solvation = 67.917447 kcal Electronic energy + Delta-G solvation = -21861.314580 eV Core-core repulsion = 18435.987186 eV Total energy + Delta-G solvation = -3425.327393 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.083 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.20153 -38.43460 -37.50696 -36.61163 -35.71364 -33.59082 -33.40561 -31.70998 -30.67988 -29.47911 -26.71519 -25.13127 -23.75219 -22.75285 -22.10231 -20.55946 -20.02857 -18.50875 -17.77886 -16.49265 -16.18494 -15.84593 -15.60988 -14.94209 -14.71268 -14.60691 -14.47666 -14.28191 -13.97413 -13.67054 -13.44712 -13.03119 -12.96868 -12.52898 -12.34454 -12.09125 -11.89404 -11.79311 -11.62448 -11.51019 -10.94772 -10.79101 -10.57499 -10.39988 -10.06426 -9.84183 -9.69138 -9.50690 -9.14813 -8.74552 -8.39929 -7.81167 -6.04697 -4.07481 -0.28020 0.55461 1.26306 1.46116 2.31135 2.40479 2.98411 3.04907 3.28661 3.36443 3.40335 3.42599 3.82453 4.07002 4.37859 4.43427 4.44417 4.57981 4.75089 4.90732 5.02196 5.23294 5.31513 5.39110 5.59153 5.70485 5.71242 5.95103 6.00280 6.10061 6.18234 6.42953 6.53408 6.58711 6.87685 7.00979 7.12227 7.17695 7.60021 7.71729 7.93596 7.94587 8.35239 8.99132 9.57047 11.06564 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.017986 B = 0.002762 C = 0.002400 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1556.359575 B =10133.827576 C =11664.435161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.251 3.749 3 C -0.123 4.123 4 C 0.108 3.892 5 Cl -0.027 7.027 6 C -0.158 4.158 7 C -0.068 4.068 8 C -0.141 4.141 9 C -0.070 4.070 10 C -0.116 4.116 11 C 0.224 3.776 12 N -0.533 5.533 13 C 0.473 3.527 14 N -0.697 5.697 15 C 0.124 3.876 16 C -0.125 4.125 17 C 0.026 3.974 18 C -0.522 4.522 19 H 0.055 0.945 20 C 0.057 3.943 21 N -0.893 5.893 22 Si 0.892 3.108 23 H -0.273 1.273 24 H -0.284 1.284 25 H -0.283 1.283 26 H 0.132 0.868 27 H 0.129 0.871 28 H 0.132 0.868 29 H 0.143 0.857 30 H 0.408 0.592 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.054 0.946 34 H 0.054 0.946 35 H 0.020 0.980 36 H 0.020 0.980 37 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.453 13.690 22.009 26.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.068 5.068 2 C -0.064 4.064 3 C -0.134 4.134 4 C 0.070 3.930 5 Cl 0.003 6.997 6 C -0.163 4.163 7 C -0.087 4.087 8 C -0.160 4.160 9 C -0.091 4.091 10 C -0.135 4.135 11 C 0.098 3.902 12 N -0.254 5.254 13 C 0.220 3.780 14 N -0.325 5.325 15 C 0.002 3.998 16 C -0.163 4.163 17 C -0.011 4.011 18 C -0.561 4.561 19 H 0.074 0.926 20 C -0.144 4.144 21 N -0.532 5.532 22 Si 0.720 3.280 23 H -0.198 1.198 24 H -0.210 1.210 25 H -0.210 1.210 26 H 0.150 0.850 27 H 0.147 0.853 28 H 0.150 0.850 29 H 0.161 0.839 30 H 0.245 0.755 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.073 0.927 34 H 0.073 0.927 35 H 0.038 0.962 36 H 0.038 0.962 37 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 5.282 13.154 21.141 25.453 hybrid contribution -1.113 0.021 0.046 1.115 sum 4.169 13.175 21.186 25.295 Atomic orbital electron populations 1.81278 1.11222 1.07816 1.06513 1.25040 0.91957 0.94553 0.94887 1.16230 0.85709 1.11433 0.99990 1.21280 0.91693 0.91582 0.88408 1.98419 1.77249 1.77075 1.47005 1.18305 0.90327 1.07322 1.00364 1.20960 0.94184 0.96771 0.96767 1.20821 0.94325 1.01465 0.99380 1.21022 1.00567 0.94524 0.92942 1.20791 0.90659 1.01555 1.00530 1.18613 0.94092 0.90056 0.87455 1.67712 1.03811 1.25897 1.27973 1.18114 0.87949 0.86641 0.85316 1.45115 1.08833 1.55175 1.23418 1.21785 0.95440 0.96354 0.86207 1.21948 0.97895 0.99452 0.97043 1.19007 0.95478 0.95284 0.91343 1.21237 0.93047 1.34202 1.07593 0.92639 1.25014 0.95152 0.96278 0.97949 1.69968 1.12690 1.42192 1.28392 0.86538 0.81473 0.78965 0.81041 1.19770 1.20966 1.20961 0.85043 0.85339 0.84993 0.83938 0.75496 0.91055 0.91047 0.92710 0.92705 0.96159 0.96155 0.92967 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -5.60 18.54 41.83 0.78 -4.83 16 2 C 0.25 3.24 13.17 -22.47 -0.30 2.94 16 3 C -0.12 -1.49 5.77 -106.43 -0.61 -2.10 16 4 C 0.11 1.16 6.42 -38.31 -0.25 0.91 16 5 Cl -0.03 -0.25 26.76 -51.86 -1.39 -1.64 16 6 C -0.16 -1.64 5.74 -106.76 -0.61 -2.25 16 7 C -0.07 -0.54 9.46 -39.48 -0.37 -0.91 16 8 C -0.14 -0.94 9.96 -39.93 -0.40 -1.33 16 9 C -0.07 -0.49 9.94 -39.94 -0.40 -0.89 16 10 C -0.12 -1.10 9.97 -39.47 -0.39 -1.49 16 11 C 0.22 2.63 6.61 -84.79 -0.56 2.07 16 12 N -0.53 -7.35 9.45 -9.99 -0.09 -7.45 16 13 C 0.47 6.40 7.49 -155.52 -1.16 5.24 16 14 N -0.70 -9.86 5.61 -60.16 -0.34 -10.20 16 15 C 0.12 2.02 5.65 -4.04 -0.02 2.00 16 16 C -0.13 -2.40 5.27 -26.73 -0.14 -2.55 16 17 C 0.03 0.66 4.97 -27.88 -0.14 0.52 16 18 C -0.52 -14.48 9.11 -34.44 -0.31 -14.79 16 19 H 0.06 1.50 7.74 -52.49 -0.41 1.10 16 20 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 21 N -0.89 -26.41 13.29 55.43 0.74 -25.67 16 22 Si 0.89 21.45 29.54 -169.99 -5.02 16.43 16 23 H -0.27 -6.45 7.11 56.52 0.40 -6.04 16 24 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 25 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 26 H 0.13 0.82 7.03 -52.48 -0.37 0.45 16 27 H 0.13 0.52 8.06 -52.49 -0.42 0.10 16 28 H 0.13 0.58 8.06 -52.49 -0.42 0.16 16 29 H 0.14 1.27 8.06 -52.49 -0.42 0.85 16 30 H 0.41 5.46 7.26 -40.82 -0.30 5.16 16 31 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 32 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 33 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 34 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 35 H 0.02 0.53 8.14 -51.93 -0.42 0.10 16 36 H 0.02 0.53 8.14 -51.93 -0.42 0.10 16 37 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 342.85 15.07 5.17 5.17 Total: -1.00 -30.41 342.85 -9.94 -40.35 By element: Atomic # 1 Polarization: 2.97 SS G_CDS: -4.01 Total: -1.04 kcal Atomic # 6 Polarization: -5.36 SS G_CDS: -5.77 Total: -11.13 kcal Atomic # 7 Polarization: -49.22 SS G_CDS: 1.08 Total: -48.14 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.43 kcal Atomic # 17 Polarization: -0.25 SS G_CDS: -1.39 Total: -1.64 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -30.41 -9.94 -40.35 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001157642199.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.269 kcal (2) G-P(sol) polarization free energy of solvation -30.409 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.352 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds