Wall clock time and date at job start Tue Mar 31 2020 11:00:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35966 * 116.99932 * 2 1 4 4 C 1.38708 * 120.01336 * 359.97438 * 3 2 1 5 5 C 1.38217 * 120.07541 * 180.02562 * 4 3 2 6 6 C 1.38337 * 120.10187 * 0.02562 * 5 4 3 7 7 F 1.35104 * 119.99339 * 180.02562 * 6 5 4 8 8 C 1.38889 * 120.02454 * 0.03954 * 6 5 4 9 9 O 1.35980 * 120.04205 * 179.97438 * 8 6 5 10 10 C 1.42893 * 117.00240 * 89.99733 * 9 8 6 11 11 H 1.09003 * 110.88253 * 32.42997 * 10 9 8 12 12 C 1.55157 * 111.00503 * 156.35110 * 10 9 8 13 13 C 1.54332 * 103.02249 * 153.38399 * 12 10 9 14 14 N 1.47026 * 107.26211 * 338.13959 * 13 12 10 15 15 C 1.36936 * 125.64605 * 178.85096 * 14 13 12 16 16 H 1.08000 * 120.00166 * 174.40973 * 15 14 13 17 17 C 1.38820 * 119.99958 * 354.13039 * 15 14 13 18 18 N 1.31619 * 119.99959 * 7.05077 * 17 15 14 19 19 Si 1.86800 * 119.99940 * 187.04361 * 17 15 14 20 20 H 1.48496 * 109.47026 * 94.98992 * 19 17 15 21 21 H 1.48495 * 109.46947 * 214.98885 * 19 17 15 22 22 H 1.48503 * 109.47295 * 334.99239 * 19 17 15 23 23 C 1.47421 * 108.70366 * 358.58629 * 14 13 12 24 24 C 1.38681 * 119.92154 * 0.25549 * 8 6 5 25 25 Cl 1.73601 * 120.05211 * 179.70206 * 24 8 6 26 26 H 1.08996 * 109.46813 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47433 * 300.00703 * 1 2 3 28 28 H 1.08995 * 109.46656 * 60.00815 * 1 2 3 29 29 H 1.08001 * 119.96103 * 0.03359 * 4 3 2 30 30 H 1.08005 * 119.94797 * 180.02562 * 5 4 3 31 31 H 1.08998 * 110.72047 * 271.94059 * 12 10 9 32 32 H 1.09001 * 110.72051 * 35.03680 * 12 10 9 33 33 H 1.08999 * 109.99368 * 218.66880 * 13 12 10 34 34 H 1.08999 * 109.78130 * 97.49414 * 13 12 10 35 35 H 0.96994 * 119.99988 * 179.97438 * 18 17 15 36 36 H 1.09008 * 110.36516 * 143.19385 * 23 14 13 37 37 H 1.08998 * 110.36626 * 265.40279 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 1.2911 2.3749 -0.0005 5 6 1.9172 3.6072 -0.0011 6 6 3.2985 3.6835 -0.0016 7 9 3.9082 4.8891 -0.0016 8 6 4.0587 2.5212 -0.0024 9 8 5.4165 2.5959 -0.0035 10 6 6.0653 2.6313 1.2692 11 1 5.5072 2.0535 2.0060 12 6 7.5296 2.1299 1.1610 13 6 8.2309 2.8494 2.3325 14 7 7.4180 4.0269 2.6708 15 6 7.6857 4.9200 3.6737 16 1 7.0764 5.8046 3.7858 17 6 8.7366 4.6854 4.5499 18 7 9.5604 3.6815 4.3356 19 14 8.9816 5.7946 6.0328 20 1 8.3241 5.1885 7.2183 21 1 10.4341 5.9518 6.2987 22 1 8.3813 7.1253 5.7602 23 6 6.2707 4.0903 1.7473 24 6 3.4315 1.2843 -0.0081 25 17 4.3785 -0.1706 -0.0170 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3632 0.5137 -0.8900 29 1 0.2125 2.3179 -0.0004 30 1 1.3271 4.5118 -0.0011 31 1 7.5771 1.0481 1.2860 32 1 7.9695 2.4264 0.2088 33 1 9.2307 3.1630 2.0323 34 1 8.2920 2.1818 3.1920 35 1 10.2949 3.5178 4.9476 36 1 5.3827 4.4469 2.2695 37 1 6.4993 4.7397 0.9023 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001227357061.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:00:37 Heat of formation + Delta-G solvation = -62.275736 kcal Electronic energy + Delta-G solvation = -24256.903413 eV Core-core repulsion = 20362.868444 eV Total energy + Delta-G solvation = -3894.034969 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.78818 -40.53696 -39.07849 -37.27984 -36.40999 -35.87689 -32.30394 -30.78470 -29.74595 -28.98783 -27.58183 -27.13656 -24.52843 -23.23705 -22.43375 -20.46439 -20.10212 -18.85215 -17.61455 -17.50536 -17.01627 -16.71076 -16.23491 -15.56153 -15.06274 -14.87254 -14.65485 -14.45606 -14.35906 -13.98458 -13.35888 -13.17820 -12.92376 -12.74237 -12.34102 -12.24303 -11.87908 -11.70174 -11.55710 -11.31391 -11.05876 -10.94735 -10.88599 -10.75563 -10.30404 -10.09612 -9.88491 -9.74716 -9.45777 -8.90390 -8.57281 -8.32147 -6.84066 -5.72255 -3.05110 0.63897 0.84190 2.01490 2.73225 3.02607 3.41448 3.46504 3.48738 3.74057 4.12645 4.40730 4.50395 4.53598 4.78138 4.79341 4.95001 5.00345 5.13908 5.31780 5.40718 5.51989 5.61826 5.66708 5.69774 5.73966 5.78344 6.08496 6.30166 6.46112 6.51234 6.63087 6.75303 6.87899 7.54128 7.58529 7.61269 7.82214 8.24692 9.21100 9.81041 10.46731 11.39933 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.019897 B = 0.003731 C = 0.003478 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1406.916792 B = 7502.599191 C = 8048.183925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.137 3.863 4 C -0.183 4.183 5 C -0.099 4.099 6 C 0.061 3.939 7 F -0.119 7.119 8 C 0.123 3.877 9 O -0.310 6.310 10 C 0.077 3.923 11 H 0.073 0.927 12 C -0.133 4.133 13 C 0.178 3.822 14 N -0.603 5.603 15 C -0.229 4.229 16 H 0.079 0.921 17 C -0.006 4.006 18 N -0.920 5.920 19 Si 0.912 3.088 20 H -0.289 1.289 21 H -0.291 1.291 22 H -0.280 1.280 23 C 0.121 3.879 24 C -0.070 4.070 25 Cl -0.030 7.030 26 H 0.103 0.897 27 H 0.059 0.941 28 H 0.058 0.942 29 H 0.147 0.853 30 H 0.148 0.852 31 H 0.067 0.933 32 H 0.070 0.930 33 H 0.047 0.953 34 H 0.053 0.947 35 H 0.253 0.747 36 H 0.039 0.961 37 H 0.032 0.968 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.555 -6.967 -10.615 23.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.090 3.910 4 C -0.202 4.202 5 C -0.118 4.118 6 C 0.040 3.960 7 F -0.098 7.098 8 C 0.076 3.924 9 O -0.226 6.226 10 C 0.022 3.978 11 H 0.091 0.909 12 C -0.172 4.172 13 C 0.053 3.947 14 N -0.330 5.330 15 C -0.357 4.357 16 H 0.097 0.903 17 C -0.203 4.203 18 N -0.567 5.567 19 Si 0.742 3.258 20 H -0.216 1.216 21 H -0.217 1.217 22 H -0.206 1.206 23 C -0.005 4.005 24 C -0.098 4.098 25 Cl -0.001 7.001 26 H 0.122 0.878 27 H 0.077 0.923 28 H 0.077 0.923 29 H 0.165 0.835 30 H 0.166 0.834 31 H 0.086 0.914 32 H 0.089 0.911 33 H 0.065 0.935 34 H 0.071 0.929 35 H 0.063 0.937 36 H 0.057 0.943 37 H 0.050 0.950 Dipole moment (debyes) X Y Z Total from point charges -19.059 -7.221 -10.592 22.969 hybrid contribution -0.012 0.782 0.936 1.220 sum -19.072 -6.439 -9.656 22.325 Atomic orbital electron populations 1.23152 0.77828 1.04444 1.01585 1.86185 1.21654 1.25364 1.88234 1.18451 0.89897 0.85455 0.97195 1.20990 1.00525 0.90579 1.08059 1.20941 0.92126 0.99104 0.99615 1.17782 0.90566 0.80664 1.06963 1.91568 1.83311 1.41066 1.93826 1.18144 0.85547 0.89123 0.99580 1.86125 1.12242 1.93188 1.31048 1.23919 0.93705 0.98802 0.81380 0.90897 1.23014 0.92371 1.00177 1.01608 1.21221 0.93317 0.87867 0.92264 1.44351 1.24156 1.28793 1.35746 1.19071 1.12307 1.00783 1.03558 0.90319 1.24836 0.97797 0.98489 0.99139 1.69960 1.17567 1.31398 1.37775 0.86098 0.77056 0.79670 0.82976 1.21593 1.21708 1.20575 1.21939 0.91777 0.93105 0.93723 1.20317 0.89240 0.88878 1.11396 1.98384 1.71487 1.33430 1.96750 0.87826 0.92263 0.92330 0.83526 0.83406 0.91389 0.91107 0.93517 0.92873 0.93669 0.94271 0.95010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.14 9.81 101.05 0.99 1.13 16 2 O -0.30 -3.14 9.95 -19.63 -0.20 -3.34 16 3 C 0.14 1.60 6.68 -39.23 -0.26 1.34 16 4 C -0.18 -1.70 9.03 -39.42 -0.36 -2.05 16 5 C -0.10 -1.04 10.01 -39.55 -0.40 -1.44 16 6 C 0.06 0.87 7.31 -39.30 -0.29 0.58 16 7 F -0.12 -1.93 16.49 2.25 0.04 -1.89 16 8 C 0.12 1.94 5.63 -39.18 -0.22 1.72 16 9 O -0.31 -5.62 9.19 -19.68 -0.18 -5.80 16 10 C 0.08 1.52 3.56 -24.58 -0.09 1.43 16 11 H 0.07 1.43 7.99 -51.93 -0.41 1.01 16 12 C -0.13 -2.68 6.68 -24.89 -0.17 -2.84 16 13 C 0.18 4.44 5.39 -3.06 -0.02 4.43 16 14 N -0.60 -16.03 3.39 -170.07 -0.58 -16.60 16 15 C -0.23 -6.55 10.26 -15.06 -0.15 -6.71 16 16 H 0.08 2.18 7.84 -52.49 -0.41 1.77 16 17 C -0.01 -0.18 5.48 -17.43 -0.10 -0.27 16 18 N -0.92 -27.25 10.36 55.49 0.58 -26.67 16 19 Si 0.91 22.33 29.56 -169.99 -5.02 17.30 16 20 H -0.29 -7.05 7.11 56.52 0.40 -6.64 16 21 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 22 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 23 C 0.12 2.73 6.35 -2.53 -0.02 2.71 16 24 C -0.07 -1.00 6.34 -39.24 -0.25 -1.25 16 25 Cl -0.03 -0.43 28.04 -51.86 -1.45 -1.88 16 26 H 0.10 0.40 8.14 -51.93 -0.42 -0.02 16 27 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 28 H 0.06 0.24 7.66 -51.93 -0.40 -0.15 16 29 H 0.15 0.84 6.29 -52.49 -0.33 0.51 16 30 H 0.15 1.14 8.06 -52.48 -0.42 0.71 16 31 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 32 H 0.07 1.37 8.14 -51.93 -0.42 0.95 16 33 H 0.05 1.27 7.64 -51.93 -0.40 0.87 16 34 H 0.05 1.44 7.26 -51.93 -0.38 1.06 16 35 H 0.25 7.25 8.31 -40.82 -0.34 6.91 16 36 H 0.04 0.87 8.14 -51.92 -0.42 0.45 16 37 H 0.03 0.74 8.14 -51.93 -0.42 0.32 16 LS Contribution 330.28 15.07 4.98 4.98 Total: -1.00 -32.20 330.28 -7.56 -39.76 By element: Atomic # 1 Polarization: -0.22 SS G_CDS: -4.40 Total: -4.62 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -1.32 Total: -1.23 kcal Atomic # 7 Polarization: -43.27 SS G_CDS: 0.00 Total: -43.27 kcal Atomic # 8 Polarization: -8.76 SS G_CDS: -0.38 Total: -9.14 kcal Atomic # 9 Polarization: -1.93 SS G_CDS: 0.04 Total: -1.89 kcal Atomic # 14 Polarization: 22.33 SS G_CDS: -5.02 Total: 17.30 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.45 Total: -1.88 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -32.20 -7.56 -39.76 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001227357061.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.516 kcal (2) G-P(sol) polarization free energy of solvation -32.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.760 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds