Wall clock time and date at job start Tue Mar 31 2020 11:17:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.40051 * 120.13463 * 327.36557 * 3 2 1 5 5 F 1.35100 * 120.06749 * 359.97438 * 4 3 2 6 6 C 1.37982 * 119.85997 * 180.02562 * 4 3 2 7 7 C 1.38916 * 120.13941 * 359.97438 * 6 4 3 8 8 O 1.35749 * 119.86558 * 179.97438 * 7 6 4 9 9 C 1.42899 * 117.00169 * 1.08778 * 8 7 6 10 10 H 1.08998 * 109.47354 * 323.32305 * 9 8 7 11 11 C 1.50701 * 109.46737 * 83.32118 * 9 8 7 12 12 H 1.08003 * 120.00381 * 54.58648 * 11 9 8 13 13 C 1.37880 * 120.00185 * 234.58414 * 11 9 8 14 14 N 1.31510 * 120.00093 * 168.06584 * 13 11 9 15 15 Si 1.86803 * 119.99721 * 348.06423 * 13 11 9 16 16 H 1.48501 * 109.46868 * 93.15453 * 15 13 11 17 17 H 1.48498 * 109.47242 * 213.15136 * 15 13 11 18 18 H 1.48496 * 109.47347 * 333.15528 * 15 13 11 19 19 C 1.50703 * 109.47232 * 203.32034 * 9 8 7 20 20 C 1.38235 * 120.00008 * 321.99817 * 19 9 8 21 21 C 1.38234 * 119.99729 * 180.02562 * 20 19 9 22 22 C 1.38231 * 120.00108 * 0.07245 * 21 20 19 23 23 C 1.38237 * 120.00229 * 359.97438 * 22 21 20 24 24 C 1.38231 * 119.99504 * 142.13397 * 19 9 8 25 25 C 1.38917 * 120.26856 * 0.27776 * 7 6 4 26 26 C 1.37983 * 120.13408 * 359.44323 * 25 7 6 27 27 F 1.35100 * 120.07062 * 180.25747 * 26 25 7 28 28 H 1.08005 * 119.92784 * 179.97438 * 6 4 3 29 29 H 0.97006 * 119.99917 * 179.97438 * 14 13 11 30 30 H 1.08003 * 119.99995 * 0.10536 * 20 19 9 31 31 H 1.07995 * 119.99887 * 180.34375 * 21 20 19 32 32 H 1.07998 * 119.99976 * 179.97438 * 22 21 20 33 33 H 1.07998 * 120.00327 * 179.97438 * 23 22 21 34 34 H 1.07999 * 120.00645 * 359.97193 * 24 19 9 35 35 H 1.08001 * 119.93162 * 179.70799 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2716 -1.0191 0.6532 5 9 2.6006 -2.0064 1.2859 6 6 4.6514 -1.0126 0.6501 7 6 5.3427 0.0022 0.0004 8 8 6.7001 0.0034 0.0013 9 6 7.3494 -1.0808 0.6683 10 1 6.7798 -1.3545 1.5563 11 6 7.4319 -2.2647 -0.2604 12 1 7.8852 -2.1564 -1.2346 13 6 6.9286 -3.4864 0.1337 14 7 6.7842 -4.4530 -0.7463 15 14 6.4519 -3.7686 1.9177 16 1 5.0082 -3.4706 2.0973 17 1 6.7141 -5.1841 2.2822 18 1 7.2541 -2.8756 2.7917 19 6 8.7394 -0.6617 1.0726 20 6 9.4905 0.1411 0.2346 21 6 10.7657 0.5250 0.6053 22 6 11.2903 0.1049 1.8132 23 6 10.5396 -0.6987 2.6508 24 6 9.2643 -1.0825 2.2802 25 6 4.6504 1.0193 -0.6448 26 6 3.2706 1.0207 -0.6536 27 9 2.5987 2.0076 -1.2859 28 1 5.1950 -1.7982 1.1538 29 1 6.4305 -5.3126 -0.4690 30 1 9.0806 0.4694 -0.7091 31 1 11.3504 1.1567 -0.0468 32 1 12.2867 0.4045 2.1026 33 1 10.9496 -1.0272 3.5944 34 1 8.6781 -1.7111 2.9342 35 1 5.1934 1.8081 -1.1442 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001228224653.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:17:28 Heat of formation + Delta-G solvation = -39.110346 kcal Electronic energy + Delta-G solvation = -25129.990294 eV Core-core repulsion = 21115.932396 eV Total energy + Delta-G solvation = -4014.057898 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.081 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -49.12560 -49.00863 -40.01004 -38.65224 -37.27083 -35.97730 -33.40988 -31.72437 -30.50333 -30.43833 -30.12311 -27.64378 -24.19656 -23.15476 -22.79522 -22.10598 -20.54078 -19.29658 -18.22749 -17.76238 -17.50123 -16.50985 -16.29421 -16.15576 -15.65375 -15.33387 -15.11687 -14.79767 -14.58134 -14.26024 -14.04029 -13.59874 -13.48444 -13.43625 -13.13850 -13.10858 -12.95247 -12.75308 -12.31504 -12.04642 -12.01130 -11.65362 -11.29717 -11.14344 -10.86527 -10.69357 -10.20868 -10.08395 -9.71995 -9.08343 -8.80978 -8.47082 -8.28857 -8.01400 -6.63069 -4.67487 0.72831 1.03668 1.81771 1.86603 2.66512 2.85927 2.91654 2.95014 3.02756 3.31447 3.67657 3.85162 3.85656 3.88063 4.29050 4.42360 4.72295 4.90724 5.03261 5.18271 5.32093 5.33966 5.50104 5.64847 5.70250 5.73179 5.81042 5.97995 6.05378 6.08898 6.27703 6.43128 6.49160 6.61271 6.89913 6.92182 6.94341 7.13650 7.45733 7.51276 7.67712 7.95852 8.52256 8.94326 10.47440 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.014285 B = 0.004984 C = 0.004109 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1959.572156 B = 5616.655399 C = 6812.075311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.419 5.419 2 C 0.268 3.732 3 C -0.165 4.165 4 C 0.218 3.782 5 F -0.120 7.120 6 C -0.255 4.255 7 C 0.263 3.737 8 O -0.298 6.298 9 C 0.202 3.798 10 H 0.051 0.949 11 C -0.538 4.538 12 H 0.092 0.908 13 C 0.092 3.908 14 N -0.853 5.853 15 Si 0.836 3.164 16 H -0.258 1.258 17 H -0.272 1.272 18 H -0.249 1.249 19 C -0.038 4.038 20 C -0.101 4.101 21 C -0.124 4.124 22 C -0.140 4.140 23 C -0.121 4.121 24 C -0.126 4.126 25 C -0.215 4.215 26 C 0.213 3.787 27 F -0.120 7.120 28 H 0.158 0.842 29 H 0.275 0.725 30 H 0.124 0.876 31 H 0.115 0.885 32 H 0.113 0.887 33 H 0.115 0.885 34 H 0.120 0.880 35 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.664 8.635 4.444 10.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.095 5.095 2 C -0.047 4.047 3 C -0.171 4.171 4 C 0.196 3.804 5 F -0.098 7.098 6 C -0.274 4.274 7 C 0.211 3.789 8 O -0.208 6.208 9 C 0.150 3.850 10 H 0.069 0.931 11 C -0.574 4.574 12 H 0.110 0.890 13 C -0.117 4.117 14 N -0.487 5.487 15 Si 0.661 3.339 16 H -0.184 1.184 17 H -0.197 1.197 18 H -0.173 1.173 19 C -0.039 4.039 20 C -0.120 4.120 21 C -0.142 4.142 22 C -0.158 4.158 23 C -0.139 4.139 24 C -0.144 4.144 25 C -0.235 4.235 26 C 0.191 3.809 27 F -0.099 7.099 28 H 0.175 0.825 29 H 0.086 0.914 30 H 0.142 0.858 31 H 0.133 0.867 32 H 0.131 0.869 33 H 0.133 0.867 34 H 0.138 0.862 35 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.976 8.544 4.316 9.622 hybrid contribution 0.026 -0.853 0.906 1.245 sum 1.001 7.692 5.223 9.351 Atomic orbital electron populations 1.81171 1.11584 1.07591 1.09159 1.24968 0.91915 0.94069 0.93701 1.15565 0.85353 1.01612 1.14558 1.16881 0.89013 0.83835 0.90701 1.91557 1.80372 1.59004 1.78866 1.21516 0.92269 1.04096 1.09524 1.18395 0.84688 0.89272 0.86512 1.86174 1.13436 1.49915 1.71301 1.19634 0.87197 0.84968 0.93248 0.93135 1.21121 1.41269 0.91769 1.03239 0.89001 1.25040 0.93533 0.96082 0.97049 1.69863 1.40529 1.04547 1.33742 0.87639 0.80258 0.79911 0.86072 1.18351 1.19717 1.17344 1.19839 0.96292 0.94718 0.93002 1.20959 0.93796 0.97582 0.99621 1.21072 0.95791 1.00610 0.96700 1.20966 0.99526 1.00040 0.95307 1.20963 0.94532 0.98915 0.99529 1.21051 0.96293 1.00752 0.96354 1.20183 0.90877 1.03326 1.09107 1.16644 0.88797 0.84177 0.91294 1.91550 1.80329 1.58918 1.79054 0.82525 0.91425 0.85794 0.86703 0.86930 0.86710 0.86202 0.82417 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -7.41 18.54 41.84 0.78 -6.63 16 2 C 0.27 4.43 14.62 -22.47 -0.33 4.10 16 3 C -0.16 -2.58 5.76 -106.61 -0.61 -3.19 16 4 C 0.22 3.70 7.27 -39.00 -0.28 3.42 16 5 F -0.12 -2.13 16.81 2.25 0.04 -2.09 16 6 C -0.25 -4.60 8.73 -39.42 -0.34 -4.95 16 7 C 0.26 4.49 6.57 -39.08 -0.26 4.23 16 8 O -0.30 -5.54 9.04 -18.95 -0.17 -5.71 16 9 C 0.20 4.09 1.84 -29.03 -0.05 4.03 16 10 H 0.05 1.01 3.49 -51.93 -0.18 0.82 16 11 C -0.54 -12.88 8.67 -34.44 -0.30 -13.18 16 12 H 0.09 2.46 8.06 -52.48 -0.42 2.04 16 13 C 0.09 2.25 5.28 -17.82 -0.09 2.16 16 14 N -0.85 -22.69 13.96 55.43 0.77 -21.91 16 15 Si 0.84 17.55 24.83 -169.99 -4.22 13.33 16 16 H -0.26 -5.25 6.57 56.52 0.37 -4.88 16 17 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 18 H -0.25 -4.73 4.68 56.52 0.26 -4.47 16 19 C -0.04 -0.71 4.97 -104.62 -0.52 -1.23 16 20 C -0.10 -1.73 9.36 -39.58 -0.37 -2.10 16 21 C -0.12 -1.81 10.05 -39.59 -0.40 -2.21 16 22 C -0.14 -1.95 10.05 -39.58 -0.40 -2.35 16 23 C -0.12 -1.80 10.05 -39.58 -0.40 -2.20 16 24 C -0.13 -2.20 9.67 -39.58 -0.38 -2.58 16 25 C -0.22 -3.04 9.94 -39.42 -0.39 -3.43 16 26 C 0.21 3.03 7.27 -39.00 -0.28 2.75 16 27 F -0.12 -1.65 16.81 2.25 0.04 -1.61 16 28 H 0.16 3.10 1.94 -52.48 -0.10 3.00 16 29 H 0.28 6.86 8.31 -40.82 -0.34 6.52 16 30 H 0.12 2.06 7.72 -52.48 -0.41 1.65 16 31 H 0.11 1.37 8.06 -52.49 -0.42 0.94 16 32 H 0.11 1.24 8.06 -52.49 -0.42 0.82 16 33 H 0.11 1.39 8.06 -52.49 -0.42 0.97 16 34 H 0.12 2.04 5.96 -52.49 -0.31 1.73 16 35 H 0.16 1.84 8.06 -52.49 -0.42 1.42 16 LS Contribution 316.14 15.07 4.76 4.76 Total: -1.00 -25.59 316.14 -5.83 -31.42 By element: Atomic # 1 Polarization: 7.58 SS G_CDS: -2.42 Total: 5.17 kcal Atomic # 6 Polarization: -11.31 SS G_CDS: -5.41 Total: -16.73 kcal Atomic # 7 Polarization: -30.09 SS G_CDS: 1.55 Total: -28.54 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -0.17 Total: -5.71 kcal Atomic # 9 Polarization: -3.77 SS G_CDS: 0.08 Total: -3.70 kcal Atomic # 14 Polarization: 17.55 SS G_CDS: -4.22 Total: 13.33 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -25.59 -5.83 -31.42 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001228224653.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.689 kcal (2) G-P(sol) polarization free energy of solvation -25.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.835 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds