Wall clock time and date at job start Tue Mar 31 2020 10:57:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 N 1.40072 * 126.13720 * 2 1 4 4 C 1.30894 * 108.51280 * 179.97438 * 3 2 1 5 5 C 1.50697 * 125.70573 * 179.97438 * 4 3 2 6 6 F 1.39908 * 109.47095 * 270.02197 * 5 4 3 7 7 F 1.39897 * 109.47055 * 30.02213 * 5 4 3 8 8 F 1.39906 * 109.47240 * 150.02623 * 5 4 3 9 9 C 1.39503 * 108.59400 * 359.97438 * 4 3 2 10 10 C 1.36291 * 126.13852 * 180.28113 * 2 1 3 11 11 C 1.47963 * 126.34044 * 0.02562 * 10 2 1 12 12 C 1.39173 * 120.43719 * 47.28025 * 11 10 2 13 13 C 1.40916 * 118.11504 * 180.02562 * 12 11 10 14 14 C 1.41384 * 120.56840 * 180.02562 * 13 12 11 15 15 H 1.07994 * 120.00377 * 204.49148 * 14 13 12 16 16 C 1.39891 * 119.99718 * 24.48588 * 14 13 12 17 17 N 1.30871 * 119.99710 * 17.35725 * 16 14 13 18 18 Si 1.86794 * 120.00183 * 197.35753 * 16 14 13 19 19 H 1.48499 * 109.47022 * 59.99842 * 18 16 14 20 20 H 1.48497 * 109.47267 * 180.02562 * 18 16 14 21 21 H 1.48502 * 109.47110 * 300.00289 * 18 16 14 22 22 C 1.40825 * 118.87005 * 0.02562 * 13 12 11 23 23 N 1.31510 * 120.73585 * 0.02562 * 22 13 12 24 24 C 1.32143 * 122.09522 * 359.69933 * 23 22 13 25 25 F 1.35092 * 119.47257 * 180.31604 * 24 23 22 26 26 H 1.09000 * 109.46375 * 93.22353 * 1 2 3 27 27 H 1.08997 * 109.46844 * 213.22623 * 1 2 3 28 28 H 1.08993 * 109.46914 * 333.22835 * 1 2 3 29 29 H 1.08001 * 126.07880 * 179.97438 * 9 4 3 30 30 H 1.08000 * 120.94409 * 0.03237 * 12 11 10 31 31 H 0.97006 * 119.99604 * 179.97438 * 17 16 14 32 32 H 1.07997 * 119.63335 * 179.97438 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2911 1.1312 0.0000 4 6 3.5386 0.7349 0.0006 5 6 4.7473 1.6349 0.0002 6 9 5.1214 1.9129 -1.3190 7 9 4.4392 2.8298 0.6592 8 9 5.8036 0.9974 0.6599 9 6 3.5622 -0.6599 0.0015 10 6 2.2688 -1.1007 -0.0054 11 6 1.8234 -2.5116 -0.0129 12 6 0.8351 -2.9343 -0.8970 13 6 0.4478 -4.2887 -0.8618 14 6 -0.5507 -4.7740 -1.7372 15 1 -1.1207 -5.6523 -1.4725 16 6 -0.8005 -4.1163 -2.9464 17 7 0.0828 -3.2816 -3.4318 18 14 -2.3948 -4.4296 -3.8680 19 1 -3.5456 -4.0510 -3.0093 20 1 -2.4158 -3.6175 -5.1111 21 1 -2.4902 -5.8700 -4.2167 22 6 1.0722 -5.1508 0.0602 23 7 2.0010 -4.7030 0.8765 24 6 2.3937 -3.4412 0.8687 25 9 3.3570 -3.0396 1.7263 26 1 -0.3632 -0.0578 -1.0261 27 1 -0.3633 -0.8596 0.5631 28 1 -0.3633 0.9175 0.4629 29 1 4.4457 -1.2811 0.0018 30 1 0.3782 -2.2439 -1.5904 31 1 -0.0903 -2.8258 -4.2705 32 1 0.7845 -6.1910 0.0981 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001240290685.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:57:35 Heat of formation + Delta-G solvation = -94.042209 kcal Electronic energy + Delta-G solvation = -25832.780097 eV Core-core repulsion = 21294.403396 eV Total energy + Delta-G solvation = -4538.376701 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.069 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -50.03611 -47.76028 -47.55902 -47.53747 -41.10269 -38.46766 -34.42319 -33.71957 -32.14614 -30.62698 -28.73167 -28.13452 -25.76174 -24.97051 -23.00904 -22.11969 -20.77770 -20.15304 -18.42132 -18.19120 -17.95937 -17.07673 -16.80273 -16.16583 -16.11074 -15.36146 -15.15971 -14.79042 -14.40425 -14.40196 -14.07399 -13.96605 -13.73400 -13.68829 -13.64559 -13.39176 -12.75504 -12.57408 -12.49981 -12.43507 -12.26382 -11.98570 -11.95441 -11.54444 -11.42665 -10.91692 -10.87422 -10.43070 -9.71976 -9.63470 -8.90854 -8.69861 -8.28750 -7.80242 -7.24084 -4.85410 1.43788 1.98859 2.20293 2.36948 2.77342 2.82741 2.84020 2.88877 2.95668 3.58221 3.77949 4.07787 4.16442 4.50235 4.78744 4.83646 4.98320 5.09800 5.31921 5.54129 5.63505 5.67853 5.80793 5.92689 6.22654 6.46525 6.48061 6.61952 6.70162 6.99187 7.11151 7.31565 7.48716 7.54605 7.95382 8.20072 8.25447 8.96156 9.67953 Molecular weight = 315.07amu Principal moments of inertia in cm(-1) A = 0.016722 B = 0.004317 C = 0.003763 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1673.991572 B = 6485.017727 C = 7438.930873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.098 3.902 2 N -0.346 5.346 3 N -0.249 5.249 4 C -0.024 4.024 5 C 0.559 3.441 6 F -0.171 7.171 7 F -0.172 7.172 8 F -0.166 7.166 9 C -0.219 4.219 10 C 0.171 3.829 11 C -0.096 4.096 12 C -0.093 4.093 13 C 0.054 3.946 14 C -0.435 4.435 15 H 0.092 0.908 16 C 0.072 3.928 17 N -0.781 5.781 18 Si 0.917 3.083 19 H -0.260 1.260 20 H -0.275 1.275 21 H -0.260 1.260 22 C 0.023 3.977 23 N -0.484 5.484 24 C 0.180 3.820 25 F -0.138 7.138 26 H 0.083 0.917 27 H 0.096 0.904 28 H 0.091 0.909 29 H 0.159 0.841 30 H 0.139 0.861 31 H 0.290 0.710 32 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.027 6.199 1.443 6.365 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 N -0.129 5.129 3 N -0.074 5.074 4 C -0.188 4.188 5 C 0.503 3.497 6 F -0.152 7.152 7 F -0.153 7.153 8 F -0.147 7.147 9 C -0.248 4.248 10 C 0.044 3.956 11 C -0.102 4.102 12 C -0.119 4.119 13 C 0.049 3.951 14 C -0.464 4.464 15 H 0.110 0.890 16 C -0.148 4.148 17 N -0.405 5.405 18 Si 0.740 3.260 19 H -0.184 1.184 20 H -0.200 1.200 21 H -0.185 1.185 22 C -0.139 4.139 23 N -0.195 5.195 24 C 0.026 3.974 25 F -0.118 7.118 26 H 0.101 0.899 27 H 0.114 0.886 28 H 0.110 0.890 29 H 0.177 0.823 30 H 0.157 0.843 31 H 0.102 0.898 32 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -0.441 6.885 1.851 7.143 hybrid contribution -0.156 -0.023 -1.059 1.070 sum -0.597 6.861 0.792 6.933 Atomic orbital electron populations 1.22055 0.73114 1.04795 1.04263 1.48835 1.06753 1.02362 1.54957 1.77158 0.99700 1.08262 1.22315 1.21689 0.92747 0.94388 1.10022 1.16876 0.81339 0.77594 0.73923 1.93231 1.92185 1.93895 1.35915 1.93207 1.93008 1.48004 1.81069 1.93220 1.58635 1.81866 1.80988 1.21046 0.97360 0.91774 1.14587 1.19616 0.89535 0.87945 0.98547 1.18391 1.02462 0.88136 1.01165 1.21732 0.96355 0.96644 0.97122 1.18446 0.92541 0.91187 0.92926 1.19580 1.15045 1.11134 1.00658 0.89037 1.26060 0.97894 0.93323 0.97555 1.69761 1.32271 1.20269 1.18159 0.86185 0.81086 0.80045 0.78659 1.18386 1.19999 1.18450 1.22438 0.95483 0.98851 0.97138 1.66376 1.14732 1.14065 1.24359 1.17376 0.95206 0.89601 0.95248 1.91445 1.61312 1.89917 1.69117 0.89883 0.88583 0.89044 0.82316 0.84316 0.89841 0.83908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.37 10.34 59.85 0.62 1.99 16 2 N -0.35 -6.20 4.05 -64.16 -0.26 -6.46 16 3 N -0.25 -4.56 12.49 33.61 0.42 -4.14 16 4 C -0.02 -0.43 6.54 -82.52 -0.54 -0.97 16 5 C 0.56 8.68 3.54 36.00 0.13 8.80 16 6 F -0.17 -2.61 17.30 2.25 0.04 -2.57 16 7 F -0.17 -2.61 17.25 2.25 0.04 -2.57 16 8 F -0.17 -2.46 17.03 2.25 0.04 -2.43 16 9 C -0.22 -4.13 9.61 -39.69 -0.38 -4.51 16 10 C 0.17 3.38 6.27 -82.48 -0.52 2.86 16 11 C -0.10 -2.05 5.45 -104.82 -0.57 -2.62 16 12 C -0.09 -2.02 7.62 -38.22 -0.29 -2.31 16 13 C 0.05 1.21 5.58 -106.71 -0.60 0.61 16 14 C -0.44 -9.44 9.07 -37.77 -0.34 -9.79 16 15 H 0.09 1.85 7.90 -52.49 -0.41 1.43 16 16 C 0.07 1.50 5.17 -17.34 -0.09 1.42 16 17 N -0.78 -17.11 10.97 55.54 0.61 -16.50 16 18 Si 0.92 15.58 29.59 -169.99 -5.03 10.55 16 19 H -0.26 -4.35 7.11 56.52 0.40 -3.95 16 20 H -0.28 -4.66 7.11 56.52 0.40 -4.26 16 21 H -0.26 -4.42 7.11 56.52 0.40 -4.02 16 22 C 0.02 0.50 10.96 -16.71 -0.18 0.32 16 23 N -0.48 -11.09 10.33 -12.54 -0.13 -11.22 16 24 C 0.18 4.07 8.38 -16.67 -0.14 3.93 16 25 F -0.14 -3.04 16.27 2.25 0.04 -3.00 16 26 H 0.08 1.10 8.07 -51.93 -0.42 0.68 16 27 H 0.10 1.31 7.68 -51.93 -0.40 0.91 16 28 H 0.09 1.03 8.14 -51.93 -0.42 0.61 16 29 H 0.16 2.84 8.06 -52.49 -0.42 2.42 16 30 H 0.14 3.03 5.81 -52.49 -0.31 2.73 16 31 H 0.29 5.84 8.30 -40.82 -0.34 5.50 16 32 H 0.14 2.77 8.06 -52.49 -0.42 2.35 16 LS Contribution 307.16 15.07 4.63 4.63 Total: -1.00 -25.14 307.16 -4.46 -29.59 By element: Atomic # 1 Polarization: 6.33 SS G_CDS: -1.94 Total: 4.39 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -2.91 Total: -0.27 kcal Atomic # 7 Polarization: -38.96 SS G_CDS: 0.64 Total: -38.32 kcal Atomic # 9 Polarization: -10.72 SS G_CDS: 0.15 Total: -10.57 kcal Atomic # 14 Polarization: 15.58 SS G_CDS: -5.03 Total: 10.55 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -25.14 -4.46 -29.59 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001240290685.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.452 kcal (2) G-P(sol) polarization free energy of solvation -25.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds