Wall clock time and date at job start Tue Mar 31 2020 11:11:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39596 * 120.45301 * 206.26742 * 3 2 1 5 5 C 1.37698 * 120.19054 * 180.02562 * 4 3 2 6 6 C 1.39836 * 121.16839 * 359.97028 * 5 4 3 7 7 C 1.48262 * 119.54272 * 179.97438 * 6 5 4 8 8 C 1.39437 * 120.06562 * 0.02562 * 7 6 5 9 9 C 1.37878 * 119.93238 * 180.02562 * 8 7 6 10 10 C 1.38864 * 120.06554 * 359.97438 * 9 8 7 11 11 O 1.35846 * 119.92657 * 180.02562 * 10 9 8 12 12 C 1.42907 * 116.99986 * 179.97438 * 11 10 9 13 13 F 1.39898 * 109.46900 * 299.99867 * 12 11 10 14 14 F 1.39904 * 109.46870 * 59.99712 * 12 11 10 15 15 C 1.38856 * 120.13986 * 0.26971 * 10 9 8 16 16 C 1.37878 * 120.06489 * 359.45899 * 15 10 9 17 17 C 1.38641 * 120.92236 * 0.26209 * 6 5 4 18 18 C 1.40588 * 119.73047 * 359.51277 * 17 6 5 19 19 C 1.40846 * 120.55192 * 180.22201 * 18 17 6 20 20 H 1.07996 * 120.00070 * 204.64440 * 19 18 17 21 21 C 1.40230 * 119.99766 * 24.65005 * 19 18 17 22 22 N 1.30660 * 120.00279 * 17.29401 * 21 19 18 23 23 Si 1.86806 * 119.99741 * 197.28907 * 21 19 18 24 24 H 1.48506 * 109.46737 * 90.00249 * 23 21 19 25 25 H 1.48499 * 109.47169 * 209.99812 * 23 21 19 26 26 H 1.48493 * 109.47177 * 330.00454 * 23 21 19 27 27 H 1.08008 * 119.90784 * 0.02562 * 4 3 2 28 28 H 1.08002 * 119.41469 * 179.97438 * 5 4 3 29 29 H 1.08001 * 120.03588 * 359.97438 * 8 7 6 30 30 H 1.07998 * 119.96679 * 179.97438 * 9 8 7 31 31 H 1.09003 * 109.47297 * 179.97438 * 12 11 10 32 32 H 1.07993 * 119.96563 * 179.72332 * 15 10 9 33 33 H 1.08004 * 120.03366 * 180.29110 * 16 15 10 34 34 H 1.08000 * 120.13472 * 179.71986 * 17 6 5 35 35 H 0.97000 * 120.00062 * 184.65389 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2750 1.0801 0.5326 5 6 4.6520 1.0753 0.5293 6 6 5.3707 -0.0004 -0.0016 7 6 6.8529 0.0324 0.0129 8 6 7.5221 1.1298 0.5537 9 6 8.9005 1.1576 0.5653 10 6 9.6223 0.0941 0.0397 11 8 10.9804 0.1243 0.0532 12 6 11.6599 -1.0031 -0.5032 13 9 11.3026 -2.1574 0.2017 14 9 11.3003 -1.1475 -1.8475 15 6 8.9589 -0.9978 -0.5040 16 6 7.5806 -1.0340 -0.5135 17 6 4.7167 -1.0945 -0.5468 18 6 3.3113 -1.1318 -0.5590 19 6 2.6292 -2.2368 -1.1043 20 1 1.6224 -2.1196 -1.4770 21 6 3.2573 -3.4892 -1.1632 22 7 4.3121 -3.7262 -0.4293 23 14 2.5860 -4.8187 -2.2907 24 1 3.2314 -4.7094 -3.6237 25 1 2.8753 -6.1539 -1.7087 26 1 1.1179 -4.6495 -2.4362 27 1 2.7405 1.9215 0.9484 28 1 5.1864 1.9171 0.9442 29 1 6.9613 1.9574 0.9622 30 1 9.4194 2.0074 0.9836 31 1 12.7368 -0.8508 -0.4299 32 1 9.5230 -1.8213 -0.9160 33 1 7.0651 -1.8857 -0.9323 34 1 5.2845 -1.9163 -0.9575 35 1 4.7865 -4.5675 -0.5194 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001242441250.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:11:11 Heat of formation + Delta-G solvation = -80.874005 kcal Electronic energy + Delta-G solvation = -24424.434611 eV Core-core repulsion = 20408.565705 eV Total energy + Delta-G solvation = -4015.868906 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.081 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -49.45829 -47.45144 -39.86759 -38.23162 -36.88297 -35.09176 -34.14328 -31.57337 -30.99335 -29.89053 -28.30315 -26.07148 -25.85070 -23.21893 -22.74233 -20.84320 -20.77731 -19.03122 -18.23847 -18.01610 -17.75450 -17.09998 -16.08639 -15.92857 -15.10224 -14.73407 -14.64376 -14.11775 -14.02124 -13.79478 -13.76564 -13.63320 -13.34601 -12.98913 -12.77734 -12.72307 -12.62743 -12.38664 -12.10273 -11.78081 -11.63635 -11.38085 -11.31595 -11.17885 -10.87763 -10.78380 -10.52368 -10.04263 -9.70378 -9.53012 -8.79214 -8.60949 -7.81736 -7.27321 -7.01177 -4.75921 1.18992 1.60398 2.33016 2.51260 2.62175 2.91256 2.95682 3.04003 3.35214 3.68130 3.81498 3.90235 4.15020 4.37060 4.42798 4.52459 4.97958 5.03926 5.27810 5.39391 5.41080 5.45850 5.62457 5.78635 5.95775 6.18246 6.28804 6.37275 6.53443 6.64099 6.70099 6.74126 6.89486 6.96422 7.15977 7.27384 7.45336 7.62304 7.72825 7.83845 8.16306 8.39054 8.49340 8.80612 9.71938 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.013919 B = 0.003903 C = 0.003132 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2011.228137 B = 7172.579677 C = 8938.640911 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.510 5.510 2 C 0.300 3.700 3 C -0.186 4.186 4 C -0.028 4.028 5 C -0.237 4.237 6 C -0.019 4.019 7 C -0.039 4.039 8 C -0.086 4.086 9 C -0.135 4.135 10 C 0.082 3.918 11 O -0.324 6.324 12 C 0.411 3.589 13 F -0.199 7.199 14 F -0.200 7.200 15 C -0.187 4.187 16 C -0.074 4.074 17 C -0.143 4.143 18 C 0.149 3.851 19 C -0.428 4.428 20 H 0.086 0.914 21 C 0.077 3.923 22 N -0.765 5.765 23 Si 0.913 3.087 24 H -0.261 1.261 25 H -0.273 1.273 26 H -0.257 1.257 27 H 0.100 0.900 28 H 0.101 0.899 29 H 0.136 0.864 30 H 0.129 0.871 31 H 0.177 0.823 32 H 0.128 0.872 33 H 0.137 0.863 34 H 0.132 0.868 35 H 0.291 0.709 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 17.002 2.776 -0.460 17.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.189 5.189 2 C -0.010 4.010 3 C -0.192 4.192 4 C -0.049 4.049 5 C -0.256 4.256 6 C -0.020 4.020 7 C -0.039 4.039 8 C -0.104 4.104 9 C -0.153 4.153 10 C 0.039 3.961 11 O -0.243 6.243 12 C 0.321 3.679 13 F -0.181 7.181 14 F -0.182 7.182 15 C -0.205 4.205 16 C -0.092 4.092 17 C -0.162 4.162 18 C 0.144 3.856 19 C -0.456 4.456 20 H 0.104 0.896 21 C -0.146 4.146 22 N -0.387 5.387 23 Si 0.736 3.264 24 H -0.186 1.186 25 H -0.197 1.197 26 H -0.181 1.181 27 H 0.119 0.881 28 H 0.119 0.881 29 H 0.154 0.846 30 H 0.147 0.853 31 H 0.193 0.807 32 H 0.146 0.854 33 H 0.155 0.845 34 H 0.149 0.851 35 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 15.473 2.665 -0.283 15.704 hybrid contribution 0.243 -1.027 -0.545 1.188 sum 15.717 1.638 -0.828 15.823 Atomic orbital electron populations 1.81023 1.12756 1.11170 1.13966 1.25805 0.92744 0.91157 0.91284 1.16985 0.83240 1.01609 1.17332 1.20378 0.93597 0.95182 0.95695 1.20132 0.93033 0.99746 1.12702 1.18460 0.89478 0.95144 0.98927 1.19134 0.93636 0.93638 0.97513 1.21142 0.92516 0.98321 0.98380 1.20269 0.93481 0.97669 1.03887 1.18867 0.80173 0.96472 1.00540 1.86541 1.18942 1.41346 1.77424 1.23273 0.97036 0.74971 0.72632 1.93105 1.93859 1.52317 1.78828 1.93100 1.93814 1.95323 1.35947 1.21402 0.96170 0.98252 1.04699 1.21247 0.92389 0.98494 0.97096 1.21437 0.93791 0.97356 1.03576 1.18347 0.91194 0.89589 0.86470 1.19796 1.01613 0.92307 1.31870 0.89572 1.26079 0.94429 1.00029 0.94033 1.69713 1.15180 1.25448 1.28375 0.86185 0.81037 0.78794 0.80405 1.18609 1.19735 1.18084 0.88144 0.88071 0.84625 0.85340 0.80667 0.85382 0.84497 0.85074 0.89762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -12.30 18.54 41.84 0.78 -11.52 16 2 C 0.30 7.02 14.28 -22.47 -0.32 6.70 16 3 C -0.19 -4.22 5.95 -104.12 -0.62 -4.84 16 4 C -0.03 -0.56 9.74 -39.27 -0.38 -0.94 16 5 C -0.24 -4.51 9.37 -39.18 -0.37 -4.88 16 6 C -0.02 -0.38 5.86 -105.03 -0.62 -1.00 16 7 C -0.04 -0.70 5.88 -104.88 -0.62 -1.31 16 8 C -0.09 -1.30 9.41 -39.27 -0.37 -1.67 16 9 C -0.13 -1.87 9.97 -39.48 -0.39 -2.26 16 10 C 0.08 1.19 6.49 -39.12 -0.25 0.93 16 11 O -0.32 -3.91 10.43 -19.26 -0.20 -4.11 16 12 C 0.41 3.79 5.98 101.05 0.60 4.39 16 13 F -0.20 -2.25 15.59 2.25 0.04 -2.22 16 14 F -0.20 -2.22 15.56 2.25 0.04 -2.19 16 15 C -0.19 -2.90 8.24 -39.48 -0.33 -3.23 16 16 C -0.07 -1.28 9.40 -39.27 -0.37 -1.65 16 17 C -0.14 -3.19 8.06 -38.55 -0.31 -3.50 16 18 C 0.15 3.57 5.73 -104.68 -0.60 2.97 16 19 C -0.43 -10.36 8.58 -37.85 -0.32 -10.69 16 20 H 0.09 2.12 7.37 -52.49 -0.39 1.74 16 21 C 0.08 1.72 5.16 -17.30 -0.09 1.63 16 22 N -0.76 -17.20 10.95 55.56 0.61 -16.59 16 23 Si 0.91 17.10 29.60 -169.99 -5.03 12.07 16 24 H -0.26 -4.78 7.11 56.52 0.40 -4.38 16 25 H -0.27 -4.98 7.11 56.52 0.40 -4.58 16 26 H -0.26 -4.97 7.11 56.52 0.40 -4.56 16 27 H 0.10 1.76 8.06 -52.48 -0.42 1.33 16 28 H 0.10 1.63 6.09 -52.49 -0.32 1.31 16 29 H 0.14 1.80 6.13 -52.49 -0.32 1.48 16 30 H 0.13 1.45 8.06 -52.49 -0.42 1.03 16 31 H 0.18 0.65 8.14 -51.93 -0.42 0.23 16 32 H 0.13 1.86 5.08 -52.49 -0.27 1.60 16 33 H 0.14 2.42 6.14 -52.48 -0.32 2.10 16 34 H 0.13 2.93 4.24 -52.49 -0.22 2.71 16 35 H 0.29 5.88 8.30 -40.82 -0.34 5.54 16 LS Contribution 317.66 15.07 4.79 4.79 Total: -1.00 -26.99 317.66 -6.59 -33.58 By element: Atomic # 1 Polarization: 7.78 SS G_CDS: -2.24 Total: 5.54 kcal Atomic # 6 Polarization: -13.98 SS G_CDS: -5.35 Total: -19.34 kcal Atomic # 7 Polarization: -29.50 SS G_CDS: 1.38 Total: -28.11 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.20 Total: -4.11 kcal Atomic # 9 Polarization: -4.48 SS G_CDS: 0.07 Total: -4.41 kcal Atomic # 14 Polarization: 17.10 SS G_CDS: -5.03 Total: 12.07 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -26.99 -6.59 -33.58 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001242441250.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.294 kcal (2) G-P(sol) polarization free energy of solvation -26.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.580 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds