Wall clock time and date at job start Tue Mar 31 2020 11:11:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39062 * 120.56800 * 72.59507 * 3 2 1 5 5 C 1.39429 * 119.80432 * 179.97438 * 4 3 2 6 6 C 1.47919 * 119.50106 * 179.97438 * 5 4 3 7 7 C 1.39823 * 120.17622 * 294.72570 * 6 5 4 8 8 F 1.35095 * 120.08901 * 359.97438 * 7 6 5 9 9 C 1.38186 * 119.81862 * 179.72599 * 7 6 5 10 10 C 1.38350 * 120.17756 * 0.54385 * 9 7 6 11 11 C 1.50702 * 119.82547 * 179.70055 * 10 9 7 12 12 O 1.42904 * 109.47061 * 270.03151 * 11 10 9 13 13 C 1.38355 * 120.35327 * 359.73373 * 10 9 7 14 14 C 1.38185 * 120.17291 * 359.97438 * 13 10 9 15 15 F 1.35108 * 120.08661 * 179.97438 * 14 13 10 16 16 C 1.40027 * 120.99217 * 0.02562 * 5 4 3 17 17 C 1.35970 * 121.18796 * 359.66716 * 16 5 4 18 18 C 1.41067 * 120.11303 * 0.61537 * 17 16 5 19 19 C 1.40421 * 120.48306 * 179.68583 * 18 17 16 20 20 H 1.07999 * 119.99661 * 154.42165 * 19 18 17 21 21 C 1.40282 * 120.00027 * 334.42940 * 19 18 17 22 22 N 1.30641 * 120.00266 * 334.67481 * 21 19 18 23 23 Si 1.86808 * 120.00013 * 154.68048 * 21 19 18 24 24 H 1.48494 * 109.47171 * 179.97438 * 23 21 19 25 25 H 1.48501 * 109.46965 * 299.99621 * 23 21 19 26 26 H 1.48506 * 109.46750 * 59.99345 * 23 21 19 27 27 H 1.08004 * 120.09485 * 359.94559 * 4 3 2 28 28 H 1.08001 * 119.90832 * 180.25186 * 9 7 6 29 29 H 1.09001 * 109.47115 * 30.02333 * 11 10 9 30 30 H 1.08995 * 109.47086 * 150.02947 * 11 10 9 31 31 H 0.96695 * 113.99557 * 180.02562 * 12 11 10 32 32 H 1.08004 * 119.91438 * 180.02562 * 13 10 9 33 33 H 1.07998 * 119.40014 * 179.97438 * 16 5 4 34 34 H 1.08004 * 119.94400 * 180.30283 * 17 16 5 35 35 H 0.96999 * 120.00139 * 354.20308 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2754 -0.3572 -1.1425 5 6 4.6695 -0.3505 -1.1250 6 6 5.4152 -0.7329 -2.3439 7 6 5.3337 -2.0387 -2.8370 8 9 4.5735 -2.9567 -2.2010 9 6 6.0289 -2.3864 -3.9795 10 6 6.8129 -1.4495 -4.6288 11 6 7.5730 -1.8391 -5.8703 12 8 8.8680 -2.3203 -5.5047 13 6 6.9033 -0.1568 -4.1439 14 6 6.2095 0.2083 -3.0060 15 9 6.2995 1.4709 -2.5337 16 6 5.3743 0.0117 0.0295 17 6 4.7236 0.3745 1.1669 18 6 3.3135 0.3790 1.2049 19 6 2.6336 0.7460 2.3774 20 1 1.6319 1.1455 2.3182 21 6 3.2555 0.5939 3.6256 22 7 4.1980 -0.2972 3.7816 23 14 2.7358 1.6654 5.0649 24 1 3.5392 1.3100 6.2621 25 1 2.9589 3.0936 4.7246 26 1 1.2956 1.4441 5.3520 27 1 2.7463 -0.6399 -2.0407 28 1 5.9638 -3.3936 -4.3639 29 1 7.0298 -2.6231 -6.3979 30 1 7.6784 -0.9699 -6.5196 31 1 9.4141 -2.5894 -6.2559 32 1 7.5171 0.5691 -4.6566 33 1 6.4542 0.0075 0.0146 34 1 5.2874 0.6549 2.0445 35 1 4.4101 -0.9102 3.0604 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001244361450.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:11:34 Heat of formation + Delta-G solvation = -83.272035 kcal Electronic energy + Delta-G solvation = -24549.680240 eV Core-core repulsion = 20533.707347 eV Total energy + Delta-G solvation = -4015.972893 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.081 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.63043 -48.61170 -39.18409 -38.00515 -36.66567 -35.26730 -34.59526 -32.04171 -30.30106 -30.12418 -29.41417 -26.83780 -24.76809 -22.89167 -22.30317 -21.97255 -20.71643 -18.50327 -17.76991 -17.70539 -17.19502 -17.08149 -15.71325 -15.55058 -15.47477 -15.08580 -14.89568 -14.65394 -14.38985 -14.35018 -14.15057 -13.82783 -12.95224 -12.93402 -12.56525 -12.52779 -12.37331 -12.01696 -11.98978 -11.88150 -11.57593 -11.51418 -11.35155 -10.91681 -10.81024 -10.58245 -10.38884 -10.12467 -9.92177 -9.40857 -8.72793 -8.63194 -8.05550 -7.85215 -7.58172 -4.92638 0.96933 1.12077 2.05781 2.41917 2.98200 3.04392 3.19022 3.35433 3.71881 3.78949 3.93873 3.96324 4.31346 4.31917 4.42366 4.69517 4.91888 4.98773 5.05480 5.07897 5.17038 5.23233 5.34759 5.71144 5.77404 5.95029 6.10637 6.13698 6.16366 6.28241 6.56319 6.59928 6.88434 6.93661 7.18252 7.29951 7.30818 7.36622 7.48387 7.65702 7.79789 8.21981 8.32885 8.69625 9.53977 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.020205 B = 0.003515 C = 0.003312 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1385.495352 B = 7963.721952 C = 8452.524681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.504 5.504 2 C 0.299 3.701 3 C -0.189 4.189 4 C 0.021 3.979 5 C -0.229 4.229 6 C -0.051 4.051 7 C 0.122 3.878 8 F -0.124 7.124 9 C -0.146 4.146 10 C -0.061 4.061 11 C 0.122 3.878 12 O -0.566 6.566 13 C -0.146 4.146 14 C 0.123 3.877 15 F -0.124 7.124 16 C -0.025 4.025 17 C -0.216 4.216 18 C 0.133 3.867 19 C -0.463 4.463 20 H 0.088 0.912 21 C 0.036 3.964 22 N -0.753 5.753 23 Si 1.067 2.933 24 H -0.268 1.268 25 H -0.268 1.268 26 H -0.270 1.270 27 H 0.100 0.900 28 H 0.137 0.863 29 H 0.059 0.941 30 H 0.059 0.941 31 H 0.380 0.620 32 H 0.137 0.863 33 H 0.096 0.904 34 H 0.116 0.884 35 H 0.308 0.692 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.649 -1.932 -13.219 16.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.182 5.182 2 C -0.011 4.011 3 C -0.195 4.195 4 C 0.000 4.000 5 C -0.231 4.231 6 C -0.053 4.053 7 C 0.103 3.897 8 F -0.102 7.102 9 C -0.165 4.165 10 C -0.061 4.061 11 C 0.045 3.955 12 O -0.372 6.372 13 C -0.165 4.165 14 C 0.104 3.896 15 F -0.103 7.103 16 C -0.044 4.044 17 C -0.235 4.235 18 C 0.127 3.873 19 C -0.488 4.488 20 H 0.106 0.894 21 C -0.191 4.191 22 N -0.373 5.373 23 Si 0.888 3.112 24 H -0.192 1.192 25 H -0.193 1.193 26 H -0.195 1.195 27 H 0.118 0.882 28 H 0.155 0.845 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.227 0.773 32 H 0.155 0.845 33 H 0.114 0.886 34 H 0.134 0.866 35 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 8.021 -1.504 -10.981 13.681 hybrid contribution 0.245 -0.479 -2.073 2.142 sum 8.265 -1.983 -13.053 15.577 Atomic orbital electron populations 1.81030 1.12578 1.14410 1.10227 1.25674 0.92602 0.91340 0.91462 1.16606 0.83326 1.21940 0.97624 1.20472 0.92205 0.92479 0.94865 1.17288 0.91753 1.21383 0.92649 1.18973 0.98373 0.91096 0.96879 1.17534 0.93730 0.86004 0.92447 1.91533 1.73157 1.64476 1.81081 1.20905 0.99404 1.00677 0.95476 1.19048 0.97435 0.92479 0.97158 1.20908 0.83656 0.98175 0.92790 1.86599 1.26798 1.86363 1.37398 1.20899 1.01640 0.97348 0.96592 1.17508 0.98723 0.79782 0.93624 1.91530 1.94569 1.36279 1.87880 1.20278 0.97614 0.94539 0.91948 1.20728 0.93581 1.10624 0.98558 1.18485 0.91371 0.86815 0.90658 1.20912 1.03264 1.32412 0.92216 0.89444 1.27431 0.92245 0.97088 1.02371 1.70400 1.20050 1.09232 1.37665 0.83589 0.77491 0.75988 0.74108 1.19180 1.19251 1.19535 0.88176 0.84526 0.92328 0.92321 0.77271 0.84521 0.88592 0.86604 0.87750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -12.25 18.54 41.84 0.78 -11.48 16 2 C 0.30 7.12 14.30 -22.47 -0.32 6.80 16 3 C -0.19 -4.40 5.93 -104.27 -0.62 -5.01 16 4 C 0.02 0.44 9.24 -38.83 -0.36 0.08 16 5 C -0.23 -4.66 4.73 -104.82 -0.50 -5.15 16 6 C -0.05 -0.90 5.28 -104.75 -0.55 -1.46 16 7 C 0.12 1.98 7.24 -39.01 -0.28 1.69 16 8 F -0.12 -2.19 16.67 2.25 0.04 -2.15 16 9 C -0.15 -1.89 9.66 -39.56 -0.38 -2.27 16 10 C -0.06 -0.72 5.51 -104.54 -0.58 -1.30 16 11 C 0.12 1.00 7.16 36.01 0.26 1.26 16 12 O -0.57 -5.08 13.64 -35.23 -0.48 -5.56 16 13 C -0.15 -1.87 9.66 -39.56 -0.38 -2.25 16 14 C 0.12 1.96 7.24 -39.01 -0.28 1.68 16 15 F -0.12 -2.13 16.67 2.25 0.04 -2.09 16 16 C -0.02 -0.51 9.38 -39.72 -0.37 -0.89 16 17 C -0.22 -4.87 7.88 -39.32 -0.31 -5.18 16 18 C 0.13 3.18 5.46 -104.61 -0.57 2.61 16 19 C -0.46 -11.19 8.49 -37.99 -0.32 -11.51 16 20 H 0.09 2.15 7.44 -52.49 -0.39 1.76 16 21 C 0.04 0.81 4.94 -17.29 -0.09 0.73 16 22 N -0.75 -17.71 12.31 55.57 0.68 -17.02 16 23 Si 1.07 19.49 30.01 -169.99 -5.10 14.39 16 24 H -0.27 -4.81 7.11 56.52 0.40 -4.40 16 25 H -0.27 -4.71 7.11 56.52 0.40 -4.31 16 26 H -0.27 -4.83 7.11 56.52 0.40 -4.42 16 27 H 0.10 1.95 8.06 -52.48 -0.42 1.53 16 28 H 0.14 1.46 8.06 -52.49 -0.42 1.03 16 29 H 0.06 0.37 8.08 -51.93 -0.42 -0.04 16 30 H 0.06 0.37 8.08 -51.93 -0.42 -0.05 16 31 H 0.38 1.39 9.12 45.56 0.42 1.80 16 32 H 0.14 1.43 8.06 -52.48 -0.42 1.00 16 33 H 0.10 1.84 8.06 -52.49 -0.42 1.41 16 34 H 0.12 2.63 6.50 -52.48 -0.34 2.29 16 35 H 0.31 7.39 6.68 -40.82 -0.27 7.12 16 LS Contribution 329.39 15.07 4.96 4.96 Total: -1.00 -27.75 329.39 -6.65 -34.41 By element: Atomic # 1 Polarization: 6.64 SS G_CDS: -1.92 Total: 4.72 kcal Atomic # 6 Polarization: -14.52 SS G_CDS: -5.66 Total: -20.18 kcal Atomic # 7 Polarization: -29.96 SS G_CDS: 1.46 Total: -28.50 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -0.48 Total: -5.56 kcal Atomic # 9 Polarization: -4.32 SS G_CDS: 0.08 Total: -4.24 kcal Atomic # 14 Polarization: 19.49 SS G_CDS: -5.10 Total: 14.39 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -27.75 -6.65 -34.41 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001244361450.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.866 kcal (2) G-P(sol) polarization free energy of solvation -27.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.406 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds