Wall clock time and date at job start Tue Mar 31 2020 10:47:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52999 * 109.46934 * 2 1 4 4 H 1.09000 * 109.47185 * 57.18200 * 3 2 1 5 5 C 1.50703 * 109.47072 * 177.17799 * 3 2 1 6 6 H 1.07997 * 120.00335 * 119.99891 * 5 3 2 7 7 C 1.37877 * 119.99952 * 300.00153 * 5 3 2 8 8 N 1.31514 * 120.00583 * 359.97438 * 7 5 3 9 9 Si 1.86804 * 119.99765 * 179.97438 * 7 5 3 10 10 H 1.48502 * 109.47178 * 60.00107 * 9 7 5 11 11 H 1.48503 * 109.47085 * 179.97438 * 9 7 5 12 12 H 1.48502 * 109.47137 * 299.99840 * 9 7 5 13 13 N 1.46899 * 109.47180 * 297.17819 * 3 2 1 14 14 C 1.37917 * 110.99960 * 158.84013 * 13 3 2 15 15 C 1.40270 * 121.12030 * 280.98722 * 14 13 3 16 16 C 1.43198 * 120.34951 * 359.97438 * 15 14 13 17 17 N 4.10296 * 44.65134 * 11.36488 * 2 1 3 18 18 C 1.40387 * 119.29447 * 179.83000 * 15 14 13 19 19 N 1.30874 * 121.62939 * 0.43194 * 18 15 14 20 20 C 1.33992 * 122.00303 * 359.79178 * 19 18 15 21 21 C 1.40565 * 120.75300 * 179.97438 * 20 19 18 22 22 Cl 1.73598 * 120.10054 * 0.03509 * 21 20 19 23 23 C 1.36313 * 119.79716 * 180.02562 * 21 20 19 24 24 C 1.39204 * 121.01544 * 0.02562 * 23 21 20 25 25 C 1.36292 * 120.78811 * 0.02562 * 24 23 21 26 26 C 1.40219 * 119.67031 * 359.97438 * 25 24 23 27 27 H 1.08998 * 109.47023 * 63.93354 * 1 2 3 28 28 H 1.09007 * 109.47199 * 183.93409 * 1 2 3 29 29 H 1.09003 * 109.47623 * 303.93059 * 1 2 3 30 30 H 1.08995 * 109.47597 * 239.99458 * 2 1 3 31 31 H 1.09006 * 109.47081 * 119.99599 * 2 1 3 32 32 H 0.96998 * 120.00875 * 179.97438 * 8 7 5 33 33 H 1.00898 * 110.99881 * 282.79130 * 13 3 2 34 34 H 1.07996 * 119.18344 * 180.20367 * 18 15 14 35 35 H 1.08000 * 119.49490 * 180.02562 * 23 21 20 36 36 H 1.07995 * 119.60177 * 179.97438 * 24 23 21 37 37 H 1.07999 * 120.16702 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6359 1.9707 0.8636 5 6 3.5453 1.4431 0.0700 6 1 4.1225 1.8976 -0.7216 7 6 4.1857 0.8634 1.1446 8 7 3.4830 0.3103 2.1088 9 14 6.0518 0.8635 1.2309 10 1 6.5472 2.2635 1.2305 11 1 6.4897 0.1843 2.4767 12 1 6.6018 0.1435 0.0543 13 7 1.6067 2.1150 -1.2321 14 6 1.6208 3.4855 -1.0782 15 6 0.5846 4.1503 -0.4060 16 6 -0.5161 3.4124 0.1368 17 7 -1.3889 2.8270 0.5682 18 6 0.6396 5.5463 -0.2684 19 7 1.6308 6.2458 -0.7594 20 6 2.6483 5.6720 -1.4156 21 6 3.6994 6.4489 -1.9328 22 17 3.6919 8.1724 -1.7252 23 6 4.7246 5.8448 -2.5977 24 6 4.7497 4.4644 -2.7754 25 6 3.7472 3.6800 -2.2884 26 6 2.6773 4.2691 -1.5995 27 1 -0.3633 0.4516 -0.9231 28 1 -0.3634 -1.0253 0.0705 29 1 -0.3634 0.5736 0.8527 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 3.9335 -0.0979 2.8647 33 1 2.1750 1.8334 -2.0167 34 1 -0.1575 6.0560 0.2524 35 1 5.5299 6.4464 -2.9927 36 1 5.5730 4.0097 -3.3062 37 1 3.7765 2.6101 -2.4324 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000591932282.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:47:32 Heat of formation + Delta-G solvation = 73.577596 kcal Electronic energy + Delta-G solvation = -23735.931658 eV Core-core repulsion = 20310.849707 eV Total energy + Delta-G solvation = -3425.081951 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.083 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.93532 -37.80039 -36.88124 -36.25067 -35.66164 -33.68834 -31.86176 -30.83622 -30.36137 -29.30502 -26.71685 -24.35493 -23.93431 -23.14748 -21.15245 -19.99334 -19.55389 -18.24870 -17.24996 -16.56493 -15.99620 -15.19313 -15.09135 -14.66680 -14.43887 -14.42907 -13.82602 -13.50299 -13.19259 -13.13533 -12.80186 -12.55179 -12.28445 -12.00889 -11.92300 -11.69906 -11.67536 -11.42631 -11.30505 -11.16611 -10.88832 -10.76377 -10.43365 -10.29981 -9.92325 -9.79345 -9.43093 -9.38711 -8.73765 -8.65326 -8.39704 -7.58564 -6.27918 -4.43980 0.37970 0.72536 1.90131 2.23983 2.74638 3.13279 3.17686 3.19929 3.21303 3.67153 4.11127 4.16727 4.25313 4.40176 4.45578 4.69869 4.98099 5.01232 5.03179 5.16936 5.33620 5.54632 5.67280 5.89165 5.92088 6.11763 6.19338 6.28335 6.37368 6.44356 6.50842 6.70777 6.78079 6.96957 6.99850 7.24741 7.37913 7.47984 7.70860 7.84744 7.93277 8.06533 8.09632 8.59327 9.25764 10.73673 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.011388 B = 0.006198 C = 0.004542 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2458.218847 B = 4516.267135 C = 6162.843908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.110 4.110 3 C 0.228 3.772 4 H 0.045 0.955 5 C -0.565 4.565 6 H 0.066 0.934 7 C 0.077 3.923 8 N -0.877 5.877 9 Si 0.892 3.108 10 H -0.274 1.274 11 H -0.285 1.285 12 H -0.274 1.274 13 N -0.637 5.637 14 C 0.280 3.720 15 C -0.131 4.131 16 C 0.278 3.722 17 N -0.423 5.423 18 C 0.203 3.797 19 N -0.496 5.496 20 C 0.168 3.832 21 C -0.030 4.030 22 Cl -0.055 7.055 23 C -0.076 4.076 24 C -0.130 4.130 25 C -0.056 4.056 26 C -0.131 4.131 27 H 0.043 0.957 28 H 0.029 0.971 29 H 0.045 0.955 30 H 0.037 0.963 31 H 0.099 0.901 32 H 0.267 0.733 33 H 0.355 0.645 34 H 0.165 0.835 35 H 0.136 0.864 36 H 0.135 0.865 37 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.582 8.809 -9.185 12.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.149 4.149 3 C 0.125 3.875 4 H 0.063 0.937 5 C -0.603 4.603 6 H 0.084 0.916 7 C -0.128 4.128 8 N -0.513 5.513 9 Si 0.719 3.281 10 H -0.199 1.199 11 H -0.210 1.210 12 H -0.199 1.199 13 N -0.259 5.259 14 C 0.165 3.835 15 C -0.141 4.141 16 C -0.037 4.037 17 N -0.099 5.099 18 C 0.028 3.972 19 N -0.205 5.205 20 C 0.046 3.954 21 C -0.058 4.058 22 Cl -0.026 7.026 23 C -0.097 4.097 24 C -0.149 4.149 25 C -0.075 4.075 26 C -0.136 4.136 27 H 0.062 0.938 28 H 0.048 0.952 29 H 0.064 0.936 30 H 0.056 0.944 31 H 0.118 0.882 32 H 0.077 0.923 33 H 0.177 0.823 34 H 0.182 0.818 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.304 8.686 -8.102 11.882 hybrid contribution 2.313 -0.548 -0.108 2.379 sum 2.008 8.138 -8.211 11.734 Atomic orbital electron populations 1.21772 0.98244 0.99032 1.00808 1.21606 0.92586 0.98068 1.02637 1.19530 0.93720 0.91173 0.83040 0.93712 1.21689 0.91058 1.39779 1.07801 0.91610 1.24863 0.98559 0.94266 0.95119 1.69846 1.35660 1.36226 1.09581 0.86636 0.85079 0.78580 0.77774 1.19938 1.20997 1.19927 1.57683 1.55819 1.01279 1.11129 1.19106 0.87634 0.90657 0.86135 1.16715 0.93418 0.93210 1.10707 1.24920 0.92531 0.93211 0.93079 1.81133 1.11781 1.07263 1.09687 1.22722 0.94661 0.88235 0.91610 1.68036 1.01899 1.38183 1.12349 1.18377 0.92914 0.89181 0.94894 1.20346 0.96424 0.85290 1.03741 1.98349 1.98333 1.09768 1.96187 1.20832 0.96765 0.95259 0.96840 1.20718 0.99677 0.92552 1.01934 1.21156 0.92130 1.00802 0.93428 1.19029 0.96408 0.93608 1.04536 0.93801 0.95162 0.93613 0.94416 0.88249 0.92268 0.82283 0.81758 0.84575 0.84676 0.84011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.84 9.65 37.15 0.36 -2.49 16 2 C -0.11 -2.41 5.44 -26.73 -0.15 -2.56 16 3 C 0.23 4.97 1.67 -68.86 -0.12 4.86 16 4 H 0.05 1.13 7.06 -51.93 -0.37 0.77 16 5 C -0.57 -13.16 8.30 -34.44 -0.29 -13.45 16 6 H 0.07 1.43 4.90 -52.49 -0.26 1.17 16 7 C 0.08 1.90 5.30 -17.82 -0.09 1.81 16 8 N -0.88 -22.96 11.30 55.43 0.63 -22.33 16 9 Si 0.89 19.40 29.54 -169.99 -5.02 14.38 16 10 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 11 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 12 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 13 N -0.64 -11.54 5.10 -52.42 -0.27 -11.81 16 14 C 0.28 4.86 5.13 -83.13 -0.43 4.43 16 15 C -0.13 -2.19 5.58 -106.40 -0.59 -2.78 16 16 C 0.28 5.02 13.98 -22.47 -0.31 4.71 16 17 N -0.42 -8.20 17.39 41.84 0.73 -7.47 16 18 C 0.20 2.98 10.87 -17.15 -0.19 2.80 16 19 N -0.50 -7.88 9.75 -10.73 -0.10 -7.99 16 20 C 0.17 2.70 6.60 -84.80 -0.56 2.14 16 21 C -0.03 -0.43 6.33 -39.40 -0.25 -0.68 16 22 Cl -0.06 -0.74 28.50 -51.86 -1.48 -2.21 16 23 C -0.08 -0.92 9.71 -39.92 -0.39 -1.31 16 24 C -0.13 -1.58 9.96 -39.92 -0.40 -1.98 16 25 C -0.06 -0.80 7.96 -39.54 -0.31 -1.12 16 26 C -0.13 -2.12 5.75 -106.66 -0.61 -2.73 16 27 H 0.04 0.85 7.80 -51.93 -0.41 0.45 16 28 H 0.03 0.56 8.14 -51.93 -0.42 0.13 16 29 H 0.04 0.98 7.05 -51.93 -0.37 0.62 16 30 H 0.04 0.79 8.14 -51.93 -0.42 0.36 16 31 H 0.10 2.46 6.00 -51.93 -0.31 2.15 16 32 H 0.27 6.77 8.31 -40.82 -0.34 6.43 16 33 H 0.35 5.83 6.39 -39.29 -0.25 5.58 16 34 H 0.17 1.87 8.06 -52.49 -0.42 1.45 16 35 H 0.14 1.26 8.06 -52.49 -0.42 0.84 16 36 H 0.14 1.25 8.06 -52.49 -0.42 0.83 16 37 H 0.14 1.96 5.28 -52.49 -0.28 1.68 16 LS Contribution 328.39 15.07 4.95 4.95 Total: -1.00 -26.89 328.39 -8.38 -35.27 By element: Atomic # 1 Polarization: 9.05 SS G_CDS: -3.48 Total: 5.56 kcal Atomic # 6 Polarization: -4.02 SS G_CDS: -4.33 Total: -8.35 kcal Atomic # 7 Polarization: -50.58 SS G_CDS: 0.98 Total: -49.60 kcal Atomic # 14 Polarization: 19.40 SS G_CDS: -5.02 Total: 14.38 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.48 Total: -2.21 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -26.89 -8.38 -35.27 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000591932282.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.848 kcal (2) G-P(sol) polarization free energy of solvation -26.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.270 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds