Wall clock time and date at job start Tue Mar 31 2020 10:42:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46496 * 109.47169 * 57.73888 * 3 2 1 5 5 C 1.36929 * 120.00207 * 264.27476 * 4 3 2 6 6 H 1.07999 * 120.00189 * 198.95289 * 5 4 3 7 7 C 1.38810 * 120.00208 * 18.95771 * 5 4 3 8 8 N 1.31620 * 119.99632 * 11.43568 * 7 5 4 9 9 Si 1.86805 * 120.00313 * 191.43852 * 7 5 4 10 10 H 1.48497 * 109.47129 * 84.97712 * 9 7 5 11 11 H 1.48501 * 109.46924 * 204.98159 * 9 7 5 12 12 H 1.48503 * 109.46852 * 324.97523 * 9 7 5 13 13 C 1.46508 * 119.99670 * 84.27293 * 4 3 2 14 14 C 1.50692 * 109.47200 * 269.99885 * 13 4 3 15 15 N 1.31138 * 126.55044 * 90.00377 * 14 13 4 16 16 C 1.34488 * 105.61343 * 180.02562 * 15 14 13 17 17 C 1.50701 * 126.28758 * 179.97438 * 16 15 14 18 18 C 1.50708 * 109.47071 * 89.99958 * 17 16 15 19 19 C 1.38267 * 119.98590 * 90.00062 * 18 17 16 20 20 C 1.38221 * 120.05079 * 180.02562 * 19 18 17 21 21 C 1.38224 * 120.02665 * 0.25137 * 20 19 18 22 22 C 1.38443 * 119.96917 * 359.47462 * 21 20 19 23 23 F 1.35106 * 120.02144 * 180.25032 * 22 21 20 24 24 C 1.38177 * 119.98716 * 270.02756 * 18 17 16 25 25 N 1.29946 * 107.42832 * 0.24013 * 16 15 14 26 26 O 1.21304 * 110.24863 * 359.57896 * 25 16 15 27 27 H 4.40641 * 5.51362 * 180.02562 * 4 1 2 28 28 H 1.09004 * 109.46833 * 297.73923 * 3 2 1 29 29 H 1.09000 * 109.46854 * 177.74096 * 3 2 1 30 30 H 0.97008 * 119.99452 * 180.02562 * 8 7 5 31 31 H 1.08999 * 109.46705 * 150.00104 * 13 4 3 32 32 H 1.09001 * 109.46680 * 30.00594 * 13 4 3 33 33 H 1.09001 * 109.47079 * 330.00423 * 17 16 15 34 34 H 1.08998 * 109.47535 * 209.99944 * 17 16 15 35 35 H 1.07999 * 119.97272 * 0.02562 * 19 18 17 36 36 H 1.08001 * 119.98944 * 179.97438 * 20 19 18 37 37 H 1.07994 * 120.01549 * 179.72132 * 21 20 19 38 38 H 1.07998 * 120.00975 * 359.97136 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1347 -0.7364 -1.1679 5 6 3.4751 -2.0575 -1.0507 6 1 4.1080 -2.5201 -1.7935 7 6 3.0065 -2.8023 0.0229 8 7 2.0633 -2.3145 0.8005 9 14 3.7148 -4.4969 0.3642 10 1 4.9491 -4.3626 1.1787 11 1 2.7178 -5.3097 1.1062 12 1 4.0402 -5.1653 -0.9214 13 6 3.2592 -0.0598 -2.4615 14 6 1.9693 -0.1999 -3.2278 15 7 0.9467 0.6203 -3.1922 16 6 0.0328 0.0959 -4.0280 17 6 -1.3264 0.6691 -4.3366 18 6 -1.2220 1.6029 -5.5149 19 6 -1.3908 1.1173 -6.7985 20 6 -1.2948 1.9724 -7.8802 21 6 -1.0248 3.3131 -7.6802 22 6 -0.8613 3.8015 -6.3952 23 9 -0.6024 5.1128 -6.1982 24 6 -0.9572 2.9438 -5.3122 25 7 0.5346 -0.9988 -4.5162 26 8 1.6486 -1.1840 -4.0732 27 1 -1.0499 0.0001 -0.0003 28 1 3.0096 -0.4775 0.9096 29 1 3.0089 1.0277 -0.0405 30 1 1.7361 -2.8348 1.5510 31 1 4.0711 -0.5118 -3.0312 32 1 3.4730 0.9967 -2.2998 33 1 -1.6947 1.2179 -3.4698 34 1 -2.0167 -0.1402 -4.5744 35 1 -1.5977 0.0691 -6.9559 36 1 -1.4264 1.5919 -8.8824 37 1 -0.9454 3.9802 -8.5258 38 1 -0.8254 3.3228 -4.3095 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281285253.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:42:49 Heat of formation + Delta-G solvation = 131.719600 kcal Electronic energy + Delta-G solvation = -25241.965501 eV Core-core repulsion = 21391.068401 eV Total energy + Delta-G solvation = -3850.897100 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 315.112 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.99195 -44.72645 -39.31918 -36.48844 -35.42999 -33.31704 -32.02039 -31.59626 -30.80882 -30.50532 -27.69451 -26.99316 -26.08341 -23.20941 -22.97205 -22.48580 -21.65433 -20.33940 -17.64224 -17.58299 -17.24687 -16.64720 -16.46366 -16.43122 -16.28757 -15.70122 -15.25774 -14.50698 -14.29513 -14.03997 -13.77416 -13.62527 -13.55750 -13.47537 -12.75246 -12.30468 -12.19318 -11.98032 -11.81792 -11.62590 -11.40747 -11.36372 -11.01325 -10.85951 -10.69391 -10.40210 -10.27005 -10.18491 -9.33712 -9.14100 -9.11820 -8.85997 -8.82331 -8.44388 -7.34680 -5.98412 -3.49593 0.95300 1.04598 1.93129 2.91781 3.27851 3.34769 3.35890 3.38398 3.72633 4.06784 4.12554 4.30659 4.35912 4.48283 4.51478 4.54687 4.74699 4.88609 5.04055 5.18160 5.22143 5.39498 5.45564 5.56453 5.63441 5.79867 5.85729 5.94520 5.98743 6.01610 6.12004 6.17002 6.35499 6.49948 6.62886 6.72729 6.77895 7.19441 7.39243 7.56157 8.04143 8.86965 8.94536 9.20168 9.47500 9.90733 11.01802 Molecular weight = 315.11amu Principal moments of inertia in cm(-1) A = 0.022808 B = 0.003319 C = 0.003184 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1227.331212 B = 8433.894566 C = 8792.517806 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.295 4.295 2 C -0.091 4.091 3 C 0.265 3.735 4 N -0.559 5.559 5 C -0.277 4.277 6 H 0.085 0.915 7 C 0.011 3.989 8 N -0.886 5.886 9 Si 0.915 3.085 10 H -0.282 1.282 11 H -0.290 1.290 12 H -0.277 1.277 13 C 0.220 3.780 14 C 0.186 3.814 15 N -0.488 5.488 16 C 0.163 3.837 17 C 0.015 3.985 18 C -0.049 4.049 19 C -0.118 4.118 20 C -0.093 4.093 21 C -0.157 4.157 22 C 0.096 3.904 23 F -0.141 7.141 24 C -0.135 4.135 25 N -0.401 5.401 26 O 0.069 5.931 27 H 0.185 0.815 28 H 0.112 0.888 29 H 0.040 0.960 30 H 0.259 0.741 31 H 0.088 0.912 32 H 0.091 0.909 33 H 0.104 0.896 34 H 0.098 0.902 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.464 9.104 -12.041 15.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.314 4.314 2 C -0.094 4.094 3 C 0.140 3.860 4 N -0.277 5.277 5 C -0.406 4.406 6 H 0.102 0.898 7 C -0.190 4.190 8 N -0.528 5.528 9 Si 0.744 3.256 10 H -0.209 1.209 11 H -0.216 1.216 12 H -0.202 1.202 13 C 0.088 3.912 14 C -0.037 4.037 15 N -0.223 5.223 16 C -0.111 4.111 17 C -0.023 4.023 18 C -0.050 4.050 19 C -0.136 4.136 20 C -0.111 4.111 21 C -0.175 4.175 22 C 0.077 3.923 23 F -0.119 7.119 24 C -0.154 4.154 25 N -0.113 5.113 26 O 0.014 5.986 27 H 0.202 0.798 28 H 0.130 0.870 29 H 0.058 0.942 30 H 0.070 0.930 31 H 0.106 0.894 32 H 0.109 0.891 33 H 0.122 0.878 34 H 0.116 0.884 35 H 0.149 0.851 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -5.113 8.886 -12.262 15.983 hybrid contribution -0.245 -0.969 0.351 1.060 sum -5.358 7.917 -11.911 15.273 Atomic orbital electron populations 1.24011 0.95201 1.07636 1.04573 1.23937 0.95018 0.94026 0.96416 1.18117 0.83043 0.92779 0.92023 1.44645 1.72046 1.09859 1.01187 1.19427 1.25183 0.86077 1.09884 0.89758 1.25148 0.96340 0.98548 0.98969 1.70059 1.26720 1.37568 1.18417 0.86109 0.78190 0.82995 0.78274 1.20883 1.21622 1.20208 1.20152 0.86428 0.99146 0.85463 1.31608 1.01325 0.81980 0.88763 1.71823 1.00939 1.29223 1.20288 1.25213 0.99207 0.91119 0.95511 1.18744 0.89106 0.97719 0.96766 1.19498 0.97997 0.92990 0.94498 1.21185 1.00315 1.00380 0.91703 1.20975 0.98405 0.92371 0.99325 1.21147 1.03827 0.96995 0.95572 1.17670 1.02236 0.78186 0.94219 1.91501 1.91594 1.32816 1.96000 1.21117 1.01988 0.93158 0.99136 1.74448 0.96033 1.19123 1.21717 1.85247 1.23984 1.44264 1.45134 0.79790 0.87040 0.94200 0.93000 0.89396 0.89066 0.87798 0.88364 0.85142 0.84949 0.84871 0.84209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.83 19.25 29.55 0.57 -6.26 16 2 C -0.09 -2.19 11.31 -37.12 -0.42 -2.60 16 3 C 0.26 5.94 5.45 -6.83 -0.04 5.91 16 4 N -0.56 -12.60 2.49 -177.95 -0.44 -13.05 16 5 C -0.28 -6.86 9.71 -15.06 -0.15 -7.00 16 6 H 0.08 2.01 7.84 -52.49 -0.41 1.60 16 7 C 0.01 0.27 5.11 -17.43 -0.09 0.18 16 8 N -0.89 -23.85 8.98 55.49 0.50 -23.35 16 9 Si 0.92 20.51 29.57 -169.99 -5.03 15.48 16 10 H -0.28 -6.22 7.11 56.52 0.40 -5.81 16 11 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 12 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 13 C 0.22 4.10 6.32 -5.19 -0.03 4.06 16 14 C 0.19 3.79 7.78 -13.06 -0.10 3.69 16 15 N -0.49 -9.78 11.55 -9.87 -0.11 -9.90 16 16 C 0.16 3.02 7.45 -156.38 -1.17 1.85 16 17 C 0.02 0.21 5.97 -29.03 -0.17 0.04 16 18 C -0.05 -0.62 5.11 -104.63 -0.54 -1.16 16 19 C -0.12 -1.33 9.70 -39.58 -0.38 -1.72 16 20 C -0.09 -0.91 10.04 -39.59 -0.40 -1.31 16 21 C -0.16 -1.62 10.03 -39.51 -0.40 -2.02 16 22 C 0.10 1.18 7.30 -39.42 -0.29 0.89 16 23 F -0.14 -1.80 17.27 2.25 0.04 -1.76 16 24 C -0.14 -1.74 9.68 -39.52 -0.38 -2.12 16 25 N -0.40 -8.09 12.16 30.90 0.38 -7.72 16 26 O 0.07 1.45 11.31 18.11 0.20 1.66 16 27 H 0.18 3.73 7.80 -54.10 -0.42 3.30 16 28 H 0.11 2.72 6.22 -51.93 -0.32 2.40 16 29 H 0.04 0.78 7.97 -51.93 -0.41 0.36 16 30 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 31 H 0.09 1.44 8.03 -51.93 -0.42 1.02 16 32 H 0.09 1.47 7.95 -51.93 -0.41 1.06 16 33 H 0.10 1.37 8.09 -51.93 -0.42 0.95 16 34 H 0.10 1.22 8.09 -51.93 -0.42 0.80 16 35 H 0.13 1.35 8.06 -52.49 -0.42 0.92 16 36 H 0.13 0.93 8.06 -52.49 -0.42 0.51 16 37 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 38 H 0.14 1.77 8.06 -52.49 -0.42 1.34 16 LS Contribution 347.39 15.07 5.24 5.24 Total: -1.00 -30.05 347.39 -7.28 -37.33 By element: Atomic # 1 Polarization: 7.70 SS G_CDS: -4.07 Total: 3.63 kcal Atomic # 6 Polarization: -3.59 SS G_CDS: -3.98 Total: -7.57 kcal Atomic # 7 Polarization: -54.33 SS G_CDS: 0.32 Total: -54.01 kcal Atomic # 8 Polarization: 1.45 SS G_CDS: 0.20 Total: 1.66 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.04 Total: -1.76 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.03 Total: 15.48 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -30.05 -7.28 -37.33 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281285253.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.047 kcal (2) G-P(sol) polarization free energy of solvation -30.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.328 kcal (6) G-S(sol) free energy of system = (1) + (5) 131.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds