Wall clock time and date at job start Tue Mar 31 2020 11:12:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.09004 * 109.47647 * 2 1 4 4 C 1.50701 * 109.47390 * 120.00245 * 2 1 3 5 5 H 1.07998 * 120.00235 * 119.99639 * 4 2 1 6 6 C 1.37875 * 119.99815 * 299.99792 * 4 2 1 7 7 N 1.31519 * 120.00153 * 0.02562 * 6 4 2 8 8 Si 1.86804 * 120.00243 * 179.97438 * 6 4 2 9 9 H 1.48494 * 109.47252 * 179.97438 * 8 6 4 10 10 H 1.48500 * 109.47141 * 300.00519 * 8 6 4 11 11 H 1.48502 * 109.46599 * 60.00394 * 8 6 4 12 12 N 1.46507 * 109.47224 * 239.99830 * 2 1 3 13 13 C 1.46494 * 120.00317 * 300.00084 * 12 2 1 14 14 C 1.34784 * 119.99825 * 120.00021 * 12 2 1 15 15 O 1.21593 * 120.00007 * 0.02562 * 14 12 2 16 16 N 1.34767 * 119.99941 * 180.02562 * 14 12 2 17 17 C 1.40187 * 120.00174 * 175.35933 * 16 14 12 18 18 C 1.39358 * 120.42115 * 34.95563 * 17 16 14 19 19 C 1.38326 * 118.42469 * 179.97438 * 18 17 16 20 20 C 1.38906 * 119.18662 * 0.02562 * 19 18 17 21 21 O 1.35760 * 119.61206 * 180.02562 * 20 19 18 22 22 C 1.42896 * 116.99942 * 180.02562 * 21 20 19 23 23 F 1.39909 * 109.46797 * 299.99474 * 22 21 20 24 24 F 1.39899 * 109.47690 * 59.99099 * 22 21 20 25 25 N 1.32201 * 120.77997 * 0.02562 * 20 19 18 26 26 C 1.31967 * 121.71488 * 359.68552 * 25 20 19 27 27 H 1.08997 * 109.47384 * 299.99856 * 1 2 3 28 28 H 1.09000 * 109.47190 * 60.00282 * 1 2 3 29 29 H 1.09000 * 109.46955 * 180.02562 * 1 2 3 30 30 H 0.97000 * 120.00439 * 179.97438 * 7 6 4 31 31 H 1.08999 * 109.46991 * 89.99396 * 13 12 2 32 32 H 1.08992 * 109.47215 * 210.00036 * 13 12 2 33 33 H 1.08999 * 109.47026 * 330.00278 * 13 12 2 34 34 H 0.97004 * 120.00056 * 355.35506 * 16 14 12 35 35 H 1.07994 * 120.79151 * 0.02562 * 18 17 16 36 36 H 1.08005 * 120.41119 * 180.02562 * 19 18 17 37 37 H 1.08997 * 109.47370 * 179.97438 * 22 21 20 38 38 H 1.08000 * 119.62685 * 180.28666 * 26 25 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0323 -0.7105 1.2304 5 1 2.6532 -1.5886 1.1313 6 6 1.6993 -0.2394 2.4827 7 7 0.9428 0.8296 2.6034 8 14 2.3214 -1.1204 4.0079 9 1 1.8271 -0.4199 5.2204 10 1 1.8259 -2.5203 4.0077 11 1 3.8064 -1.1208 4.0081 12 7 2.0183 -0.6907 -1.1962 13 6 1.6645 -2.0932 -1.4281 14 6 2.7932 -0.0356 -2.0834 15 8 3.0873 1.1284 -1.8907 16 7 3.2420 -0.6708 -3.1840 17 6 3.9659 0.0356 -4.1547 18 6 4.8318 1.0617 -3.7814 19 6 5.5259 1.7310 -4.7732 20 6 5.3381 1.3613 -6.0989 21 8 6.0153 2.0120 -7.0792 22 6 5.7795 1.5867 -8.4229 23 9 6.1312 0.2389 -8.5539 24 9 4.4245 1.7471 -8.7319 25 7 4.5075 0.3833 -6.4174 26 6 3.8330 -0.2810 -5.4980 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 0.7082 1.1608 3.4844 31 1 0.7376 -2.1444 -1.9993 32 1 2.4629 -2.5818 -1.9863 33 1 1.5295 -2.5969 -0.4709 34 1 3.0643 -1.6167 -3.3045 35 1 4.9585 1.3276 -2.7424 36 1 6.2057 2.5312 -4.5200 37 1 6.3809 2.1875 -9.1051 38 1 3.1668 -1.0772 -5.7957 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000338611162.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:12:45 Heat of formation + Delta-G solvation = -120.760890 kcal Electronic energy + Delta-G solvation = -26059.783394 eV Core-core repulsion = 21767.168694 eV Total energy + Delta-G solvation = -4292.614700 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.118 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.15802 -47.28316 -40.89509 -39.65875 -37.90599 -35.68714 -34.53118 -32.91532 -32.20238 -30.01451 -28.72118 -26.45437 -26.13755 -25.26835 -23.74273 -23.24137 -21.29821 -19.61206 -19.12628 -18.40559 -17.95586 -17.92550 -16.99166 -16.49182 -16.20442 -15.64028 -15.25668 -15.07285 -14.77683 -14.40937 -14.30007 -14.00389 -13.61086 -13.37923 -13.23793 -13.19928 -12.94433 -12.73396 -12.59987 -12.43392 -12.27222 -11.71992 -11.59073 -11.10579 -10.91099 -10.77366 -10.53588 -10.33499 -10.21699 -9.90658 -9.72054 -9.32810 -9.17175 -8.48211 -8.09384 -7.63021 -6.12395 -4.20990 1.02978 1.25155 2.35429 3.01417 3.24383 3.30223 3.31843 3.40409 3.50646 3.85972 4.07334 4.27948 4.36033 4.43265 4.60327 4.83038 4.97018 5.13198 5.18973 5.48591 5.54095 5.60273 5.88519 6.06062 6.22447 6.27038 6.56963 6.64554 6.74881 6.91343 6.98150 7.06836 7.37698 7.61150 7.67479 7.73498 7.99511 8.14288 8.51470 8.78780 9.06984 9.45878 10.92825 Molecular weight = 315.12amu Principal moments of inertia in cm(-1) A = 0.032380 B = 0.002656 C = 0.002615 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 864.528491 B =10539.036754 C =10706.802945 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.273 3.727 3 H 0.066 0.934 4 C -0.529 4.529 5 H 0.059 0.941 6 C 0.066 3.934 7 N -0.887 5.887 8 Si 0.900 3.100 9 H -0.286 1.286 10 H -0.277 1.277 11 H -0.277 1.277 12 N -0.601 5.601 13 C 0.083 3.917 14 C 0.697 3.303 15 O -0.580 6.580 16 N -0.689 5.689 17 C 0.111 3.889 18 C -0.047 4.047 19 C -0.151 4.151 20 C 0.272 3.728 21 O -0.320 6.320 22 C 0.425 3.575 23 F -0.196 7.196 24 F -0.195 7.195 25 N -0.505 5.505 26 C 0.104 3.896 27 H 0.095 0.905 28 H 0.011 0.989 29 H 0.030 0.970 30 H 0.265 0.735 31 H 0.045 0.955 32 H 0.047 0.953 33 H 0.086 0.914 34 H 0.406 0.594 35 H 0.165 0.835 36 H 0.146 0.854 37 H 0.174 0.826 38 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.577 -2.428 -18.599 20.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.173 3.827 3 H 0.083 0.917 4 C -0.568 4.568 5 H 0.077 0.923 6 C -0.137 4.137 7 N -0.525 5.525 8 Si 0.727 3.273 9 H -0.211 1.211 10 H -0.202 1.202 11 H -0.202 1.202 12 N -0.335 5.335 13 C -0.061 4.061 14 C 0.399 3.601 15 O -0.458 6.458 16 N -0.340 5.340 17 C 0.012 3.988 18 C -0.075 4.075 19 C -0.172 4.172 20 C 0.093 3.907 21 O -0.232 6.232 22 C 0.334 3.666 23 F -0.178 7.178 24 F -0.177 7.177 25 N -0.225 5.225 26 C -0.055 4.055 27 H 0.113 0.887 28 H 0.031 0.969 29 H 0.049 0.951 30 H 0.075 0.925 31 H 0.064 0.936 32 H 0.065 0.935 33 H 0.105 0.895 34 H 0.243 0.757 35 H 0.183 0.817 36 H 0.164 0.836 37 H 0.190 0.810 38 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 7.646 -1.527 -19.064 20.596 hybrid contribution 0.042 -1.062 1.451 1.799 sum 7.688 -2.589 -17.612 19.391 Atomic orbital electron populations 1.22105 0.98098 0.99467 1.00907 1.18923 0.90746 0.94317 0.78753 0.91668 1.21279 1.32096 1.13172 0.90270 0.92264 1.24883 0.94883 0.94961 0.98951 1.69866 1.36090 1.22510 1.23989 0.86539 0.79237 0.79544 0.81957 1.21139 1.20236 1.20234 1.47635 1.50555 1.11599 1.23668 1.21575 0.98416 0.83342 1.02810 1.15989 0.79662 0.84930 0.79546 1.90861 1.62823 1.15573 1.76549 1.42863 1.57502 1.12721 1.20881 1.18491 0.94479 0.96759 0.89050 1.21793 0.90663 0.93504 1.01561 1.21031 1.03821 1.03452 0.88927 1.19505 0.92626 0.91451 0.87075 1.86775 1.63578 1.58033 1.14840 1.23055 0.79676 0.79790 0.84058 1.93096 1.91596 1.37639 1.95419 1.93103 1.36756 1.95247 1.92549 1.67231 1.09072 1.08193 1.38039 1.22086 0.97703 0.99344 0.86354 0.88696 0.96946 0.95122 0.92530 0.93626 0.93465 0.89494 0.75683 0.81724 0.83628 0.80994 0.82089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.42 8.97 37.15 0.33 -3.09 16 2 C 0.27 6.72 2.64 -69.08 -0.18 6.53 16 3 H 0.07 1.87 6.90 -51.93 -0.36 1.52 16 4 C -0.53 -13.79 7.99 -34.44 -0.28 -14.07 16 5 H 0.06 1.51 7.33 -52.49 -0.38 1.12 16 6 C 0.07 1.75 5.30 -17.82 -0.09 1.66 16 7 N -0.89 -24.50 11.32 55.43 0.63 -23.88 16 8 Si 0.90 20.50 29.54 -169.99 -5.02 15.48 16 9 H -0.29 -6.50 7.11 56.52 0.40 -6.10 16 10 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 11 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 12 N -0.60 -12.15 2.75 -181.01 -0.50 -12.65 16 13 C 0.08 1.27 9.24 59.84 0.55 1.82 16 14 C 0.70 13.85 8.14 -86.92 -0.71 13.14 16 15 O -0.58 -13.62 13.15 5.28 0.07 -13.55 16 16 N -0.69 -10.27 5.24 -14.10 -0.07 -10.35 16 17 C 0.11 1.63 6.32 -83.47 -0.53 1.10 16 18 C -0.05 -0.72 8.80 -39.13 -0.34 -1.06 16 19 C -0.15 -2.02 10.03 -39.30 -0.39 -2.42 16 20 C 0.27 3.75 7.19 -17.15 -0.12 3.63 16 21 O -0.32 -3.73 10.41 -18.99 -0.20 -3.92 16 22 C 0.42 3.95 6.06 101.05 0.61 4.56 16 23 F -0.20 -2.22 16.57 2.25 0.04 -2.18 16 24 F -0.19 -2.30 16.57 2.25 0.04 -2.26 16 25 N -0.50 -7.19 8.06 -13.17 -0.11 -7.30 16 26 C 0.10 1.36 11.11 -17.34 -0.19 1.17 16 27 H 0.09 2.43 6.07 -51.93 -0.32 2.12 16 28 H 0.01 0.26 8.14 -51.93 -0.42 -0.17 16 29 H 0.03 0.65 7.67 -51.93 -0.40 0.25 16 30 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 31 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 32 H 0.05 0.55 6.30 -51.93 -0.33 0.23 16 33 H 0.09 1.44 7.02 -51.93 -0.36 1.07 16 34 H 0.41 4.69 6.52 -40.82 -0.27 4.42 16 35 H 0.17 2.80 6.32 -52.49 -0.33 2.47 16 36 H 0.15 1.60 8.06 -52.48 -0.42 1.17 16 37 H 0.17 0.63 8.14 -51.93 -0.42 0.21 16 38 H 0.16 1.63 8.06 -52.49 -0.42 1.21 16 LS Contribution 329.69 15.07 4.97 4.97 Total: -1.00 -32.48 329.69 -5.50 -37.97 By element: Atomic # 1 Polarization: 8.68 SS G_CDS: -3.99 Total: 4.69 kcal Atomic # 6 Polarization: 14.32 SS G_CDS: -1.34 Total: 12.98 kcal Atomic # 7 Polarization: -54.12 SS G_CDS: -0.05 Total: -54.17 kcal Atomic # 8 Polarization: -17.35 SS G_CDS: -0.13 Total: -17.47 kcal Atomic # 9 Polarization: -4.51 SS G_CDS: 0.07 Total: -4.44 kcal Atomic # 14 Polarization: 20.50 SS G_CDS: -5.02 Total: 15.48 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -32.48 -5.50 -37.97 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000338611162.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.788 kcal (2) G-P(sol) polarization free energy of solvation -32.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds