Wall clock time and date at job start Tue Mar 31 2020 11:26:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46892 * 111.00005 * 2 1 4 4 C 1.50705 * 109.46872 * 66.05378 * 3 2 1 5 5 C 1.38636 * 119.74483 * 269.72155 * 4 3 2 6 6 C 1.37618 * 120.24360 * 179.72262 * 5 4 3 7 7 C 1.40714 * 119.74559 * 0.57257 * 6 5 4 8 8 C 1.41399 * 120.24466 * 179.68062 * 7 6 5 9 9 H 1.08003 * 120.00021 * 155.30880 * 8 7 6 10 10 C 1.39943 * 120.00029 * 335.31727 * 8 7 6 11 11 N 1.30833 * 119.99883 * 342.22694 * 10 8 7 12 12 Si 1.86800 * 120.00282 * 162.23294 * 10 8 7 13 13 H 1.48498 * 109.47215 * 94.66184 * 12 10 8 14 14 H 1.48501 * 109.47211 * 214.66378 * 12 10 8 15 15 H 1.48502 * 109.46717 * 334.65930 * 12 10 8 16 16 C 1.40714 * 119.51392 * 359.70566 * 7 6 5 17 17 C 1.37618 * 119.74257 * 359.97438 * 16 7 6 18 18 C 1.46900 * 110.99534 * 236.05170 * 2 1 3 19 19 C 1.50706 * 109.47075 * 293.95114 * 18 2 1 20 20 C 1.38231 * 120.00770 * 105.00308 * 19 18 2 21 21 C 1.38216 * 120.01725 * 180.02562 * 20 19 18 22 22 C 1.38266 * 120.02408 * 359.97438 * 21 20 19 23 23 C 1.38194 * 120.01379 * 359.97438 * 22 21 20 24 24 C 1.38333 * 120.00655 * 284.73144 * 19 18 2 25 25 Cl 1.73598 * 120.01378 * 359.96991 * 24 19 18 26 26 H 1.09001 * 109.47088 * 183.95492 * 1 2 3 27 27 H 1.09000 * 109.46739 * 303.94951 * 1 2 3 28 28 H 1.08995 * 109.47393 * 63.94572 * 1 2 3 29 29 H 1.08999 * 109.47345 * 186.04750 * 3 2 1 30 30 H 1.08995 * 109.47619 * 306.05368 * 3 2 1 31 31 H 1.08004 * 119.87714 * 359.97438 * 5 4 3 32 32 H 1.08010 * 120.12714 * 180.28068 * 6 5 4 33 33 H 0.96999 * 119.99437 * 180.02562 * 11 10 8 34 34 H 1.08001 * 120.12746 * 179.97438 * 16 7 6 35 35 H 1.07997 * 119.87596 * 179.97438 * 17 16 7 36 36 H 1.08992 * 109.47409 * 53.94961 * 18 2 1 37 37 H 1.09000 * 109.47199 * 173.95492 * 18 2 1 38 38 H 1.08006 * 119.99453 * 0.02562 * 20 19 18 39 39 H 1.08000 * 119.99031 * 179.97438 * 21 20 19 40 40 H 1.08000 * 119.98981 * 179.97438 * 22 21 20 41 41 H 1.07995 * 120.00321 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6370 2.0470 1.2986 5 6 0.4492 2.7544 1.4009 6 6 0.1090 3.3705 2.5836 7 6 0.9778 3.2905 3.6876 8 6 0.6420 3.9252 4.9056 9 1 1.0573 3.5644 5.8350 10 6 -0.2287 5.0207 4.9070 11 7 -0.4582 5.6753 3.7976 12 14 -1.0632 5.5488 6.4926 13 1 -0.2663 6.6234 7.1372 14 1 -2.4254 6.0566 6.1898 15 1 -1.1612 4.3862 7.4113 16 6 2.1835 2.5746 3.5704 17 6 2.5001 1.9608 2.3800 18 6 1.9953 -0.7659 -1.1377 19 6 1.6368 -2.2204 -0.9730 20 6 0.6297 -2.7753 -1.7402 21 6 0.3003 -4.1091 -1.5889 22 6 0.9784 -4.8893 -0.6706 23 6 1.9861 -4.3360 0.0961 24 6 2.3193 -3.0019 -0.0581 25 17 3.5896 -2.3077 0.9001 26 1 -0.3633 -1.0252 0.0709 27 1 -0.3633 0.5739 0.8525 28 1 -0.3634 0.4513 -0.9232 29 1 3.0797 1.3444 -0.1083 30 1 1.5611 1.9274 -0.8308 31 1 -0.2136 2.8188 0.5506 32 1 -0.8191 3.9174 2.6626 33 1 -1.0615 6.4349 3.7987 34 1 2.8578 2.5071 4.4113 35 1 3.4252 1.4111 2.2876 36 1 1.5610 -0.3872 -2.0628 37 1 3.0796 -0.6611 -1.1758 38 1 0.0999 -2.1665 -2.4580 39 1 -0.4869 -4.5421 -2.1883 40 1 0.7203 -5.9313 -0.5526 41 1 2.5159 -4.9456 0.8131 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000398998383.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:26:40 Heat of formation + Delta-G solvation = 37.036368 kcal Electronic energy + Delta-G solvation = -22863.657272 eV Core-core repulsion = 19540.531118 eV Total energy + Delta-G solvation = -3323.126154 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.109 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -39.65140 -37.98889 -36.38148 -36.24422 -33.70617 -31.94129 -30.79921 -29.97692 -29.26684 -27.16301 -26.77380 -24.36312 -22.77658 -22.24813 -20.97378 -20.69059 -19.66777 -17.25040 -17.08310 -15.85462 -15.63061 -15.36282 -15.23207 -14.55398 -14.47397 -13.95340 -13.85590 -13.36479 -13.29938 -13.19369 -12.73724 -12.41459 -11.95841 -11.90625 -11.62455 -11.58944 -11.42039 -11.31600 -11.27533 -11.16962 -10.94117 -10.84994 -10.57761 -10.48685 -10.31446 -9.53310 -9.33840 -9.08820 -9.03056 -8.68829 -7.90957 -7.37170 -7.23353 -6.72972 -4.30486 1.08542 1.13855 2.30269 2.77286 3.08400 3.11958 3.14391 3.20986 3.51520 3.95656 4.38494 4.63829 4.65747 4.77327 4.86675 5.10169 5.25864 5.41641 5.47792 5.62608 5.68121 5.76177 5.78476 5.85090 5.95757 6.09528 6.12444 6.25772 6.30930 6.32452 6.42738 6.45335 6.48644 6.67667 6.99177 7.11478 7.29960 7.42640 7.46161 7.48671 7.67265 7.94278 8.10348 8.19803 8.35619 8.68661 8.94337 9.02898 10.21665 Molecular weight = 315.11amu Principal moments of inertia in cm(-1) A = 0.022174 B = 0.002920 C = 0.002860 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1262.425175 B = 9587.225787 C = 9786.958975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.522 5.522 3 C 0.122 3.878 4 C -0.204 4.204 5 C -0.094 4.094 6 C -0.166 4.166 7 C 0.113 3.887 8 C -0.463 4.463 9 H 0.076 0.924 10 C 0.076 3.924 11 N -0.795 5.795 12 Si 0.905 3.095 13 H -0.271 1.271 14 H -0.276 1.276 15 H -0.261 1.261 16 C -0.228 4.228 17 C -0.066 4.066 18 C 0.088 3.912 19 C -0.064 4.064 20 C -0.105 4.105 21 C -0.121 4.121 22 C -0.113 4.113 23 C -0.116 4.116 24 C -0.012 4.012 25 Cl -0.053 7.053 26 H 0.056 0.944 27 H 0.083 0.917 28 H 0.015 0.985 29 H 0.064 0.936 30 H 0.023 0.977 31 H 0.082 0.918 32 H 0.115 0.885 33 H 0.279 0.721 34 H 0.089 0.911 35 H 0.086 0.914 36 H 0.039 0.961 37 H 0.084 0.916 38 H 0.126 0.874 39 H 0.125 0.875 40 H 0.127 0.873 41 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.502 -15.532 -10.700 18.921 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.245 5.245 3 C -0.004 4.004 4 C -0.206 4.206 5 C -0.113 4.113 6 C -0.186 4.186 7 C 0.111 3.889 8 C -0.493 4.493 9 H 0.094 0.906 10 C -0.141 4.141 11 N -0.420 5.420 12 Si 0.730 3.270 13 H -0.196 1.196 14 H -0.201 1.201 15 H -0.184 1.184 16 C -0.248 4.248 17 C -0.085 4.085 18 C -0.040 4.040 19 C -0.066 4.066 20 C -0.124 4.124 21 C -0.139 4.139 22 C -0.132 4.132 23 C -0.135 4.135 24 C -0.039 4.039 25 Cl -0.024 7.024 26 H 0.075 0.925 27 H 0.101 0.899 28 H 0.034 0.966 29 H 0.082 0.918 30 H 0.041 0.959 31 H 0.100 0.900 32 H 0.133 0.867 33 H 0.090 0.910 34 H 0.108 0.892 35 H 0.104 0.896 36 H 0.057 0.943 37 H 0.103 0.897 38 H 0.144 0.856 39 H 0.143 0.857 40 H 0.145 0.855 41 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.661 -15.462 -10.281 18.642 hybrid contribution -0.655 0.771 0.047 1.013 sum 1.007 -14.690 -10.234 17.932 Atomic orbital electron populations 1.22411 0.87667 1.01285 1.00887 1.62123 1.07835 1.14581 1.39970 1.20736 0.98337 0.85912 0.95433 1.18796 0.98846 1.07938 0.95036 1.20503 0.95573 0.98386 0.96799 1.21258 1.00664 1.03328 0.93299 1.17605 0.89439 0.89047 0.92858 1.19590 1.23800 1.11532 0.94400 0.90566 1.25896 0.95048 0.95472 0.97668 1.69839 1.28725 1.15115 1.28346 0.86354 0.78960 0.79460 0.82273 1.19634 1.20093 1.18440 1.20963 0.98354 1.08447 0.97012 1.20297 0.97282 0.97785 0.93135 1.21076 1.00878 0.89026 0.92973 1.19754 0.95566 0.95883 0.95350 1.21045 0.96608 0.95324 0.99392 1.21164 0.99957 0.94005 0.98779 1.21065 0.95908 1.00033 0.96179 1.21072 0.98548 0.93446 1.00442 1.20817 0.94213 0.93257 0.95607 1.98393 1.49136 1.84739 1.70111 0.92513 0.89874 0.96620 0.91772 0.95853 0.89992 0.86684 0.91011 0.89238 0.89621 0.94320 0.89737 0.85588 0.85730 0.85483 0.85181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 8.99 60.07 0.54 0.94 16 2 N -0.52 -8.35 4.66 -245.83 -1.15 -9.50 16 3 C 0.12 2.14 5.11 -4.98 -0.03 2.12 16 4 C -0.20 -4.41 4.91 -104.33 -0.51 -4.92 16 5 C -0.09 -2.15 7.87 -39.66 -0.31 -2.47 16 6 C -0.17 -4.32 8.70 -38.87 -0.34 -4.65 16 7 C 0.11 3.04 5.57 -106.82 -0.60 2.45 16 8 C -0.46 -12.48 9.05 -37.74 -0.34 -12.82 16 9 H 0.08 1.99 7.91 -52.48 -0.41 1.57 16 10 C 0.08 1.94 5.14 -17.34 -0.09 1.85 16 11 N -0.79 -20.71 10.97 55.55 0.61 -20.10 16 12 Si 0.91 18.86 29.59 -169.99 -5.03 13.83 16 13 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 14 H -0.28 -5.61 7.11 56.52 0.40 -5.21 16 15 H -0.26 -5.40 7.11 56.52 0.40 -5.00 16 16 C -0.23 -5.71 9.80 -38.87 -0.38 -6.09 16 17 C -0.07 -1.51 9.67 -39.66 -0.38 -1.89 16 18 C 0.09 1.16 4.43 -4.97 -0.02 1.14 16 19 C -0.06 -0.80 4.42 -104.59 -0.46 -1.26 16 20 C -0.10 -1.10 9.12 -39.59 -0.36 -1.46 16 21 C -0.12 -1.11 10.05 -39.58 -0.40 -1.51 16 22 C -0.11 -1.05 10.05 -39.59 -0.40 -1.44 16 23 C -0.12 -1.26 9.83 -39.55 -0.39 -1.65 16 24 C -0.01 -0.15 6.31 -39.50 -0.25 -0.40 16 25 Cl -0.05 -0.73 27.56 -51.86 -1.43 -2.16 16 26 H 0.06 0.84 6.88 -51.93 -0.36 0.48 16 27 H 0.08 1.52 5.90 -51.93 -0.31 1.21 16 28 H 0.02 0.22 8.14 -51.93 -0.42 -0.20 16 29 H 0.06 1.08 7.87 -51.93 -0.41 0.67 16 30 H 0.02 0.40 8.06 -51.93 -0.42 -0.02 16 31 H 0.08 1.72 7.99 -52.48 -0.42 1.30 16 32 H 0.12 3.10 6.18 -52.48 -0.32 2.78 16 33 H 0.28 6.61 8.30 -40.82 -0.34 6.27 16 34 H 0.09 2.14 8.06 -52.49 -0.42 1.72 16 35 H 0.09 1.79 8.06 -52.49 -0.42 1.36 16 36 H 0.04 0.47 7.93 -51.93 -0.41 0.06 16 37 H 0.08 1.11 7.36 -51.93 -0.38 0.72 16 38 H 0.13 1.13 8.00 -52.48 -0.42 0.71 16 39 H 0.12 0.84 8.06 -52.49 -0.42 0.42 16 40 H 0.13 0.84 8.06 -52.49 -0.42 0.42 16 41 H 0.13 1.20 8.06 -52.49 -0.42 0.78 16 LS Contribution 353.93 15.07 5.33 5.33 Total: -1.00 -27.85 353.93 -11.91 -39.77 By element: Atomic # 1 Polarization: 10.43 SS G_CDS: -5.53 Total: 4.89 kcal Atomic # 6 Polarization: -27.34 SS G_CDS: -4.72 Total: -32.06 kcal Atomic # 7 Polarization: -29.06 SS G_CDS: -0.54 Total: -29.60 kcal Atomic # 14 Polarization: 18.86 SS G_CDS: -5.03 Total: 13.83 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.43 Total: -2.16 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -27.85 -11.91 -39.77 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000398998383.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.803 kcal (2) G-P(sol) polarization free energy of solvation -27.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.767 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds