Wall clock time and date at job start Tue Mar 31 2020 11:26:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46904 * 110.99876 * 2 1 4 4 C 1.50694 * 109.47559 * 66.04033 * 3 2 1 5 5 C 1.38632 * 119.75235 * 269.73183 * 4 3 2 6 6 C 1.37625 * 120.24810 * 179.71694 * 5 4 3 7 7 C 1.40716 * 119.74376 * 0.57372 * 6 5 4 8 8 C 1.41397 * 120.23926 * 179.68014 * 7 6 5 9 9 H 1.08006 * 119.99132 * 204.40187 * 8 7 6 10 10 C 1.39939 * 120.00246 * 24.40560 * 8 7 6 11 11 N 1.30819 * 120.00223 * 17.85250 * 10 8 7 12 12 Si 1.86801 * 119.99818 * 197.84322 * 10 8 7 13 13 H 1.48502 * 109.46948 * 90.00635 * 12 10 8 14 14 H 1.48500 * 109.47391 * 210.00103 * 12 10 8 15 15 H 1.48498 * 109.47485 * 330.00515 * 12 10 8 16 16 C 1.40712 * 119.51089 * 359.70215 * 7 6 5 17 17 C 1.37619 * 119.74705 * 359.97438 * 16 7 6 18 18 C 1.46898 * 111.00495 * 236.04208 * 2 1 3 19 19 C 1.50695 * 109.46977 * 293.95270 * 18 2 1 20 20 C 1.38260 * 119.99579 * 269.72132 * 19 18 2 21 21 C 1.38223 * 120.02541 * 179.77017 * 20 19 18 22 22 C 1.38236 * 120.01493 * 0.50542 * 21 20 19 23 23 C 1.38324 * 119.98435 * 359.74670 * 22 21 20 24 24 Cl 1.73606 * 120.01282 * 180.02562 * 23 22 21 25 25 C 1.38196 * 119.99383 * 89.99702 * 19 18 2 26 26 H 1.08999 * 109.47005 * 183.95835 * 1 2 3 27 27 H 1.09003 * 109.47382 * 303.95819 * 1 2 3 28 28 H 1.09003 * 109.47409 * 63.95820 * 1 2 3 29 29 H 1.08997 * 109.46978 * 186.04533 * 3 2 1 30 30 H 1.09005 * 109.46811 * 306.04428 * 3 2 1 31 31 H 1.08004 * 119.87556 * 359.97438 * 5 4 3 32 32 H 1.08000 * 120.12596 * 180.27557 * 6 5 4 33 33 H 0.96999 * 120.00635 * 179.97438 * 11 10 8 34 34 H 1.08003 * 120.12870 * 179.97438 * 16 7 6 35 35 H 1.07998 * 119.87692 * 180.02562 * 17 16 7 36 36 H 1.08995 * 109.47116 * 173.95327 * 18 2 1 37 37 H 1.09002 * 109.46978 * 53.95050 * 18 2 1 38 38 H 1.08002 * 119.98855 * 0.02562 * 20 19 18 39 39 H 1.08008 * 119.98996 * 180.26008 * 21 20 19 40 40 H 1.07996 * 120.00275 * 179.76989 * 22 21 20 41 41 H 1.08004 * 120.00680 * 359.95798 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6368 2.0473 1.2983 5 6 0.4489 2.7546 1.4005 6 6 0.1085 3.3709 2.5831 7 6 0.9773 3.2910 3.6872 8 6 0.6412 3.9259 4.9051 9 1 1.4191 4.2107 5.5981 10 6 -0.6992 4.1851 5.2125 11 7 -1.6506 3.5525 4.5752 12 14 -1.1299 5.4341 6.5330 13 1 -1.2700 6.7778 5.9165 14 1 -2.4108 5.0500 7.1789 15 1 -0.0515 5.4676 7.5534 16 6 2.1830 2.5752 3.5701 17 6 2.4998 1.9612 2.3799 18 6 1.9955 -0.7660 -1.1375 19 6 1.6371 -2.2204 -0.9726 20 6 2.4969 -3.0729 -0.3051 21 6 2.1666 -4.4060 -0.1494 22 6 0.9810 -4.8900 -0.6701 23 6 0.1228 -4.0387 -1.3426 24 17 -1.3666 -4.6456 -1.9963 25 6 0.4516 -2.7031 -1.4936 26 1 -0.3633 -1.0252 0.0709 27 1 -0.3634 0.5740 0.8524 28 1 -0.3634 0.4512 -0.9233 29 1 3.0796 1.3444 -0.1082 30 1 1.5610 1.9273 -0.8310 31 1 -0.2139 2.8188 0.5502 32 1 -0.8195 3.9177 2.6619 33 1 -2.5797 3.7318 4.7885 34 1 2.8574 2.5078 4.4111 35 1 3.4245 1.4109 2.2878 36 1 3.0797 -0.6611 -1.1754 37 1 1.5611 -0.3874 -2.0627 38 1 3.4252 -2.6961 0.0984 39 1 2.8368 -5.0705 0.3758 40 1 0.7248 -5.9324 -0.5516 41 1 -0.2183 -2.0380 -2.0183 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000399139366.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:26:43 Heat of formation + Delta-G solvation = 34.637681 kcal Electronic energy + Delta-G solvation = -22549.167970 eV Core-core repulsion = 19225.937801 eV Total energy + Delta-G solvation = -3323.230169 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.109 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -39.69026 -38.04573 -36.77682 -36.21403 -33.73398 -31.92666 -30.86276 -30.01315 -29.30682 -27.20787 -26.85335 -24.40226 -22.75845 -22.27888 -21.01348 -20.74510 -19.71250 -17.28393 -17.05236 -15.83206 -15.72244 -15.40806 -15.24069 -14.66355 -14.58093 -13.97773 -13.87394 -13.51366 -13.33306 -13.25159 -12.74696 -12.44348 -11.97261 -11.96436 -11.71151 -11.59730 -11.54920 -11.37189 -11.25820 -11.20993 -11.04131 -10.92593 -10.90123 -10.47267 -10.30936 -9.57276 -9.36836 -9.14884 -9.03025 -8.78428 -7.97281 -7.41688 -7.27752 -6.75361 -4.33872 1.06131 1.13198 1.99241 2.74105 3.06798 3.10053 3.10716 3.17476 3.49997 3.93347 4.38283 4.61953 4.66468 4.75939 4.91397 5.13053 5.21712 5.33019 5.50757 5.57966 5.67809 5.73051 5.75833 5.81414 5.93204 6.05084 6.09024 6.20810 6.24531 6.37239 6.41764 6.45749 6.50181 6.67870 6.95578 7.08496 7.25692 7.38521 7.41973 7.43195 7.63281 7.89923 8.06757 8.15258 8.31845 8.65332 8.90934 8.99206 10.18913 Molecular weight = 315.11amu Principal moments of inertia in cm(-1) A = 0.018727 B = 0.002653 C = 0.002507 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1494.847478 B =10553.004610 C =11165.242187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.528 5.528 3 C 0.121 3.879 4 C -0.208 4.208 5 C -0.094 4.094 6 C -0.166 4.166 7 C 0.112 3.888 8 C -0.463 4.463 9 H 0.077 0.923 10 C 0.076 3.924 11 N -0.792 5.792 12 Si 0.907 3.093 13 H -0.268 1.268 14 H -0.278 1.278 15 H -0.262 1.262 16 C -0.229 4.229 17 C -0.068 4.068 18 C 0.089 3.911 19 C -0.055 4.055 20 C -0.094 4.094 21 C -0.109 4.109 22 C -0.116 4.116 23 C -0.035 4.035 24 Cl -0.078 7.078 25 C -0.105 4.105 26 H 0.060 0.940 27 H 0.085 0.915 28 H 0.016 0.984 29 H 0.064 0.936 30 H 0.024 0.976 31 H 0.082 0.918 32 H 0.116 0.884 33 H 0.280 0.720 34 H 0.090 0.910 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.039 0.961 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.129 0.871 41 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.642 -12.262 -11.511 17.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 N -0.252 5.252 3 C -0.005 4.005 4 C -0.210 4.210 5 C -0.113 4.113 6 C -0.186 4.186 7 C 0.110 3.890 8 C -0.493 4.493 9 H 0.095 0.905 10 C -0.142 4.142 11 N -0.417 5.417 12 Si 0.732 3.268 13 H -0.193 1.193 14 H -0.203 1.203 15 H -0.186 1.186 16 C -0.248 4.248 17 C -0.087 4.087 18 C -0.039 4.039 19 C -0.056 4.056 20 C -0.112 4.112 21 C -0.127 4.127 22 C -0.135 4.135 23 C -0.062 4.062 24 Cl -0.049 7.049 25 C -0.124 4.124 26 H 0.078 0.922 27 H 0.104 0.896 28 H 0.035 0.965 29 H 0.083 0.917 30 H 0.042 0.958 31 H 0.100 0.900 32 H 0.134 0.866 33 H 0.091 0.909 34 H 0.108 0.892 35 H 0.104 0.896 36 H 0.101 0.899 37 H 0.057 0.943 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.147 0.853 41 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.408 -12.559 -11.150 17.137 hybrid contribution -0.870 0.754 -0.105 1.156 sum 2.538 -11.805 -11.255 16.507 Atomic orbital electron populations 1.22485 0.87408 1.01676 1.01066 1.62160 1.08256 1.14660 1.40120 1.20767 0.98270 0.85978 0.95526 1.18805 0.98476 1.08563 0.95159 1.20515 0.95180 0.98762 0.96796 1.21276 1.01561 1.03924 0.91802 1.17619 0.90495 0.88350 0.92547 1.19609 0.92328 1.34054 1.03262 0.90498 1.25900 0.96309 0.94955 0.96994 1.69827 1.01291 1.33327 1.37298 0.86334 0.78519 0.81141 0.80853 1.19315 1.20346 1.18636 1.20963 1.00806 1.06110 0.96948 1.20308 0.97246 0.98063 0.93090 1.21093 1.00602 0.89254 0.92948 1.19786 0.93527 0.95766 0.96549 1.21166 0.99971 0.92966 0.97122 1.21112 0.96300 0.95866 0.99409 1.21009 0.94238 0.99719 0.98565 1.20869 0.89349 0.94294 1.01665 1.98364 1.33540 1.88008 1.84983 1.20971 0.97135 0.93425 1.00848 0.92159 0.89621 0.96538 0.91714 0.95763 0.89955 0.86590 0.90926 0.89164 0.89556 0.89877 0.94275 0.85191 0.85151 0.85260 0.85309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.35 8.79 60.06 0.53 0.88 16 2 N -0.53 -8.39 4.74 -245.83 -1.17 -9.56 16 3 C 0.12 2.05 5.11 -4.98 -0.03 2.02 16 4 C -0.21 -4.39 4.91 -104.33 -0.51 -4.91 16 5 C -0.09 -2.12 7.87 -39.66 -0.31 -2.44 16 6 C -0.17 -4.27 8.70 -38.87 -0.34 -4.61 16 7 C 0.11 2.98 5.57 -106.83 -0.60 2.39 16 8 C -0.46 -12.29 9.05 -37.74 -0.34 -12.63 16 9 H 0.08 1.97 7.91 -52.48 -0.42 1.56 16 10 C 0.08 1.91 5.14 -17.35 -0.09 1.82 16 11 N -0.79 -20.46 10.95 55.55 0.61 -19.86 16 12 Si 0.91 18.67 29.60 -169.99 -5.03 13.64 16 13 H -0.27 -5.45 7.11 56.52 0.40 -5.05 16 14 H -0.28 -5.61 7.11 56.52 0.40 -5.21 16 15 H -0.26 -5.34 7.11 56.52 0.40 -4.94 16 16 C -0.23 -5.60 9.80 -38.87 -0.38 -5.99 16 17 C -0.07 -1.51 9.67 -39.66 -0.38 -1.89 16 18 C 0.09 1.11 5.12 -4.98 -0.03 1.08 16 19 C -0.06 -0.67 4.88 -104.63 -0.51 -1.18 16 20 C -0.09 -1.04 9.70 -39.58 -0.38 -1.42 16 21 C -0.11 -1.08 10.05 -39.59 -0.40 -1.48 16 22 C -0.12 -1.20 9.83 -39.55 -0.39 -1.59 16 23 C -0.04 -0.40 6.32 -39.50 -0.25 -0.65 16 24 Cl -0.08 -0.84 28.96 -51.86 -1.50 -2.34 16 25 C -0.10 -1.24 7.75 -39.55 -0.31 -1.55 16 26 H 0.06 0.93 6.17 -51.93 -0.32 0.61 16 27 H 0.09 1.65 5.90 -51.93 -0.31 1.34 16 28 H 0.02 0.24 8.14 -51.93 -0.42 -0.18 16 29 H 0.06 1.01 7.87 -51.93 -0.41 0.60 16 30 H 0.02 0.40 8.06 -51.93 -0.42 -0.02 16 31 H 0.08 1.71 7.99 -52.48 -0.42 1.29 16 32 H 0.12 3.09 6.16 -52.49 -0.32 2.77 16 33 H 0.28 6.59 8.30 -40.82 -0.34 6.25 16 34 H 0.09 2.10 8.06 -52.48 -0.42 1.68 16 35 H 0.09 1.71 8.06 -52.49 -0.42 1.28 16 36 H 0.08 0.93 7.87 -51.93 -0.41 0.52 16 37 H 0.04 0.46 8.06 -51.93 -0.42 0.04 16 38 H 0.13 1.30 8.06 -52.49 -0.42 0.88 16 39 H 0.13 0.97 8.06 -52.48 -0.42 0.55 16 40 H 0.13 1.09 8.06 -52.49 -0.42 0.67 16 41 H 0.13 1.46 8.03 -52.48 -0.42 1.04 16 LS Contribution 354.58 15.07 5.34 5.34 Total: -1.00 -27.24 354.58 -11.99 -39.23 By element: Atomic # 1 Polarization: 11.21 SS G_CDS: -5.53 Total: 5.68 kcal Atomic # 6 Polarization: -27.42 SS G_CDS: -4.71 Total: -32.13 kcal Atomic # 7 Polarization: -28.86 SS G_CDS: -0.56 Total: -29.42 kcal Atomic # 14 Polarization: 18.67 SS G_CDS: -5.03 Total: 13.64 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -27.24 -11.99 -39.23 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000399139366.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.865 kcal (2) G-P(sol) polarization free energy of solvation -27.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.629 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.228 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds