Wall clock time and date at job start Tue Mar 31 2020 11:24:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.40059 * 125.94552 * 2 1 4 4 C 1.31864 * 108.22723 * 180.02562 * 3 2 1 5 5 C 1.47725 * 125.97745 * 179.97438 * 4 3 2 6 6 O 1.21572 * 119.99642 * 174.87556 * 5 4 3 7 7 N 1.34768 * 120.00376 * 354.87712 * 5 4 3 8 8 C 1.46496 * 120.00224 * 184.35741 * 7 5 4 9 9 C 1.53004 * 109.47172 * 185.07553 * 8 7 5 10 10 C 1.50696 * 115.54979 * 65.10152 * 9 8 7 11 11 H 1.08005 * 119.99612 * 269.85797 * 10 9 8 12 12 C 1.37869 * 120.00375 * 89.85895 * 10 9 8 13 13 N 1.31515 * 120.00135 * 180.97749 * 12 10 9 14 14 Si 1.86801 * 119.99920 * 0.97482 * 12 10 9 15 15 H 1.48508 * 109.47022 * 92.66650 * 14 12 10 16 16 H 1.48495 * 109.47116 * 212.66167 * 14 12 10 17 17 H 1.48494 * 109.47196 * 332.66547 * 14 12 10 18 18 C 1.53002 * 117.49926 * 279.42366 * 9 8 7 19 19 C 1.53004 * 117.49703 * 210.76896 * 9 8 7 20 20 C 1.41061 * 108.03855 * 359.74867 * 4 3 2 21 21 C 1.35589 * 107.79443 * 0.41892 * 20 4 3 22 22 O 1.35777 * 126.08194 * 179.84764 * 21 20 4 23 23 C 1.42901 * 116.99647 * 354.84890 * 22 21 20 24 24 F 1.39896 * 109.47312 * 304.06272 * 23 22 21 25 25 F 1.39902 * 109.47078 * 64.06651 * 23 22 21 26 26 H 1.09007 * 109.46887 * 274.85617 * 1 2 3 27 27 H 1.08995 * 109.47765 * 34.85677 * 1 2 3 28 28 H 1.08997 * 109.47022 * 154.86261 * 1 2 3 29 29 H 0.97002 * 119.99877 * 4.36421 * 7 5 4 30 30 H 1.08996 * 109.47600 * 305.08110 * 8 7 5 31 31 H 1.09007 * 109.47007 * 65.07801 * 8 7 5 32 32 H 0.97000 * 120.00153 * 179.97438 * 13 12 10 33 33 H 1.09002 * 117.50193 * 0.02562 * 18 9 8 34 34 H 1.09003 * 117.49633 * 145.01890 * 18 9 8 35 35 H 1.08998 * 117.49753 * 214.98272 * 19 9 8 36 36 H 1.09004 * 117.49721 * 359.97428 * 19 9 8 37 37 H 1.07998 * 126.10213 * 180.26414 * 20 4 3 38 38 H 1.09001 * 109.46916 * 184.05970 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2872 1.1339 0.0000 4 6 3.5433 0.7326 -0.0006 5 6 4.7338 1.6072 -0.0013 6 8 5.8445 1.1220 0.0923 7 7 4.5886 2.9430 -0.1057 8 6 5.7706 3.8030 -0.2025 9 6 5.3369 5.2701 -0.1827 10 6 4.6984 5.7418 1.0982 11 1 3.6285 5.6689 1.2269 12 6 5.4798 6.2665 2.1056 13 7 4.9247 6.6604 3.2309 14 14 7.3269 6.4179 1.8722 15 1 7.6495 7.7649 1.3364 16 1 8.0080 6.2286 3.1781 17 1 7.7918 5.3807 0.9165 18 6 4.8233 5.8727 -1.4919 19 6 6.1992 6.2721 -0.9530 20 6 3.5512 -0.6780 0.0050 21 6 2.2625 -1.0996 -0.0007 22 8 1.8437 -2.3912 -0.0009 23 6 2.8504 -3.3995 -0.1091 24 9 3.6118 -3.1767 -1.2614 25 9 3.6814 -3.3514 1.0155 26 1 -0.3633 0.0870 1.0241 27 1 -0.3634 0.8432 -0.5873 28 1 -0.3633 -0.9303 -0.4365 29 1 3.7014 3.3350 -0.1165 30 1 6.4319 3.6081 0.6416 31 1 6.2977 3.5925 -1.1332 32 1 5.4745 7.0292 3.9398 33 1 4.7940 5.2239 -2.3673 34 1 4.0237 6.6107 -1.4267 35 1 6.3043 7.2726 -0.5335 36 1 7.0757 5.8861 -1.4736 37 1 4.4273 -1.3094 0.0100 38 1 2.3777 -4.3798 -0.1697 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000431097209.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:24:59 Heat of formation + Delta-G solvation = -65.127862 kcal Electronic energy + Delta-G solvation = -26162.666887 eV Core-core repulsion = 21872.464617 eV Total energy + Delta-G solvation = -4290.202271 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.118 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.62154 -47.68668 -41.57705 -39.11254 -38.33815 -36.99413 -33.63008 -33.30272 -32.08097 -29.91025 -27.77264 -26.85694 -26.17729 -25.15656 -22.74863 -21.72855 -21.57541 -19.97216 -19.34091 -18.71089 -18.32393 -18.24135 -16.98556 -16.41056 -16.17201 -16.13856 -15.21184 -14.96244 -14.88842 -14.54684 -14.43009 -14.28454 -14.05707 -13.85312 -13.82317 -13.13979 -13.07579 -12.86665 -12.71997 -12.59925 -12.39460 -12.33306 -11.93052 -11.13452 -11.03392 -10.84525 -10.45551 -10.17069 -9.84779 -9.53753 -9.35362 -9.15543 -8.71635 -8.62348 -8.54272 -8.31389 -6.11309 -4.15918 1.33058 1.37204 2.05533 2.60015 3.07259 3.31324 3.42663 3.47464 3.61372 3.69283 3.86419 4.20318 4.23768 4.43835 4.75039 4.93809 4.95751 4.99861 5.16887 5.22123 5.34377 5.52399 5.70418 5.85659 6.04378 6.08436 6.22045 6.24922 6.44479 6.50820 6.71483 6.72929 6.99014 7.06421 7.11044 7.29346 7.71001 8.13771 8.45576 8.66263 8.89629 9.51461 11.00109 Molecular weight = 315.12amu Principal moments of inertia in cm(-1) A = 0.019986 B = 0.003268 C = 0.003166 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1400.615392 B = 8566.012494 C = 8843.102497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.100 3.900 2 N -0.355 5.355 3 N -0.231 5.231 4 C 0.067 3.933 5 C 0.589 3.411 6 O -0.538 6.538 7 N -0.683 5.683 8 C 0.155 3.845 9 C -0.016 4.016 10 C -0.490 4.490 11 H 0.079 0.921 12 C 0.079 3.921 13 N -0.895 5.895 14 Si 0.880 3.120 15 H -0.279 1.279 16 H -0.294 1.294 17 H -0.256 1.256 18 C -0.179 4.179 19 C -0.192 4.192 20 C -0.264 4.264 21 C 0.254 3.746 22 O -0.317 6.317 23 C 0.428 3.572 24 F -0.191 7.191 25 F -0.191 7.191 26 H 0.080 0.920 27 H 0.096 0.904 28 H 0.090 0.910 29 H 0.411 0.589 30 H 0.070 0.930 31 H 0.047 0.953 32 H 0.265 0.735 33 H 0.073 0.927 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.075 0.925 37 H 0.163 0.837 38 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.114 -19.790 -8.717 23.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.040 4.040 2 N -0.147 5.147 3 N -0.061 5.061 4 C -0.100 4.100 5 C 0.371 3.629 6 O -0.414 6.414 7 N -0.332 5.332 8 C 0.032 3.968 9 C -0.017 4.017 10 C -0.527 4.527 11 H 0.097 0.903 12 C -0.124 4.124 13 N -0.532 5.532 14 Si 0.708 3.292 15 H -0.206 1.206 16 H -0.221 1.221 17 H -0.180 1.180 18 C -0.216 4.216 19 C -0.230 4.230 20 C -0.294 4.294 21 C 0.086 3.914 22 O -0.230 6.230 23 C 0.338 3.662 24 F -0.173 7.173 25 F -0.172 7.172 26 H 0.099 0.901 27 H 0.114 0.886 28 H 0.109 0.891 29 H 0.247 0.753 30 H 0.088 0.912 31 H 0.065 0.935 32 H 0.075 0.925 33 H 0.092 0.908 34 H 0.107 0.893 35 H 0.108 0.892 36 H 0.094 0.906 37 H 0.181 0.819 38 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -9.311 -19.166 -8.460 22.926 hybrid contribution 1.203 -0.375 0.098 1.264 sum -8.108 -19.541 -8.361 22.749 Atomic orbital electron populations 1.21987 0.73059 1.04777 1.04217 1.48652 1.06950 1.00686 1.58387 1.77956 1.00694 1.03890 1.23596 1.22039 0.92349 0.93828 1.01813 1.16878 0.86050 0.82061 0.77876 1.90773 1.24631 1.75101 1.50886 1.45743 1.11895 1.04745 1.70783 1.21234 0.86131 0.89422 1.00036 1.19620 0.99845 0.89134 0.93116 1.20191 0.95222 1.41121 0.96151 0.90301 1.24982 0.98614 0.94122 0.94651 1.69888 1.36164 1.41679 1.05454 0.86837 0.85830 0.79157 0.77369 1.20560 1.22135 1.18003 1.22882 0.97018 1.04138 0.97598 1.22939 0.93612 1.00919 1.05483 1.21145 0.94883 0.94983 1.18429 1.18562 0.89784 0.80518 1.02545 1.86314 1.36188 1.11676 1.88870 1.23421 0.78316 0.92144 0.72364 1.93151 1.77923 1.95469 1.50743 1.93160 1.74156 1.96745 1.53163 0.90099 0.88563 0.89095 0.75339 0.91167 0.93499 0.92517 0.90833 0.89334 0.89159 0.90603 0.81916 0.79362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.80 11.44 59.85 0.68 1.48 16 2 N -0.35 -4.67 4.03 -68.19 -0.28 -4.94 16 3 N -0.23 -3.80 12.27 33.34 0.41 -3.40 16 4 C 0.07 1.20 7.09 -82.91 -0.59 0.61 16 5 C 0.59 11.97 7.82 -12.39 -0.10 11.88 16 6 O -0.54 -12.22 16.88 5.30 0.09 -12.13 16 7 N -0.68 -13.87 5.45 -61.29 -0.33 -14.21 16 8 C 0.15 3.36 5.22 -4.04 -0.02 3.34 16 9 C -0.02 -0.36 0.82 -155.66 -0.13 -0.49 16 10 C -0.49 -13.19 9.33 -34.45 -0.32 -13.51 16 11 H 0.08 2.30 8.06 -52.48 -0.42 1.88 16 12 C 0.08 2.24 5.47 -17.82 -0.10 2.14 16 13 N -0.90 -26.98 13.96 55.43 0.77 -26.21 16 14 Si 0.88 21.73 24.74 -169.99 -4.20 17.52 16 15 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 16 H -0.29 -7.40 7.11 56.52 0.40 -7.00 16 17 H -0.26 -6.03 5.94 56.52 0.34 -5.70 16 18 C -0.18 -3.49 9.96 -26.69 -0.27 -3.76 16 19 C -0.19 -3.97 7.28 -26.69 -0.19 -4.17 16 20 C -0.26 -4.15 8.80 -39.46 -0.35 -4.50 16 21 C 0.25 3.34 7.46 -16.73 -0.12 3.22 16 22 O -0.32 -3.01 10.36 -19.04 -0.20 -3.21 16 23 C 0.43 3.00 5.99 101.05 0.61 3.61 16 24 F -0.19 -1.80 15.99 2.25 0.04 -1.77 16 25 F -0.19 -1.85 16.22 2.25 0.04 -1.82 16 26 H 0.08 0.56 8.14 -51.92 -0.42 0.14 16 27 H 0.10 0.67 8.14 -51.93 -0.42 0.25 16 28 H 0.09 0.50 8.04 -51.93 -0.42 0.08 16 29 H 0.41 8.06 8.16 -40.82 -0.33 7.72 16 30 H 0.07 1.67 7.31 -51.93 -0.38 1.29 16 31 H 0.05 0.94 8.09 -51.92 -0.42 0.52 16 32 H 0.27 7.55 8.31 -40.82 -0.34 7.21 16 33 H 0.07 1.27 8.14 -51.93 -0.42 0.85 16 34 H 0.09 1.73 8.14 -51.93 -0.42 1.31 16 35 H 0.09 1.96 6.82 -51.93 -0.35 1.60 16 36 H 0.08 1.43 8.14 -51.93 -0.42 1.00 16 37 H 0.16 2.53 6.64 -52.49 -0.35 2.18 16 38 H 0.19 0.18 8.14 -51.93 -0.42 -0.24 16 LS Contribution 337.00 15.07 5.08 5.08 Total: -1.00 -34.52 337.00 -3.89 -38.42 By element: Atomic # 1 Polarization: 11.21 SS G_CDS: -4.41 Total: 6.80 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -0.89 Total: -0.15 kcal Atomic # 7 Polarization: -49.32 SS G_CDS: 0.57 Total: -48.75 kcal Atomic # 8 Polarization: -15.23 SS G_CDS: -0.11 Total: -15.34 kcal Atomic # 9 Polarization: -3.66 SS G_CDS: 0.07 Total: -3.58 kcal Atomic # 14 Polarization: 21.73 SS G_CDS: -4.20 Total: 17.52 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -34.52 -3.89 -38.42 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000431097209.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.710 kcal (2) G-P(sol) polarization free energy of solvation -34.523 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.233 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.418 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds