Wall clock time and date at job start Tue Mar 31 2020 10:42:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53009 * 109.47518 * 2 1 4 4 N 1.46888 * 109.47264 * 180.08836 * 3 2 1 5 5 C 1.46901 * 111.00188 * 293.29189 * 4 3 2 6 6 C 1.50703 * 109.47053 * 288.38674 * 5 4 3 7 7 C 1.38465 * 120.01741 * 279.12318 * 6 5 4 8 8 F 1.35100 * 120.01986 * 0.03834 * 7 6 5 9 9 C 1.38441 * 119.95761 * 180.02562 * 7 6 5 10 10 C 1.38223 * 120.00759 * 0.02562 * 9 7 6 11 11 C 1.38212 * 120.03191 * 359.67889 * 10 9 7 12 12 C 1.38290 * 120.02081 * 99.14554 * 6 5 4 13 13 Cl 1.73601 * 119.99741 * 359.97438 * 12 6 5 14 14 C 1.46901 * 111.00574 * 57.24610 * 4 3 2 15 15 C 1.53000 * 109.46970 * 72.03692 * 14 4 3 16 16 H 1.09003 * 109.47062 * 53.01031 * 15 14 4 17 17 O 1.42900 * 109.47638 * 293.00706 * 15 14 4 18 18 C 1.50700 * 109.47061 * 173.00648 * 15 14 4 19 19 H 1.07993 * 119.99934 * 359.97438 * 18 15 14 20 20 C 1.37880 * 119.99972 * 180.02562 * 18 15 14 21 21 N 1.31512 * 119.99818 * 180.02562 * 20 18 15 22 22 Si 1.86793 * 120.00070 * 359.97438 * 20 18 15 23 23 H 1.48501 * 109.47376 * 90.00071 * 22 20 18 24 24 H 1.48499 * 109.47555 * 210.00249 * 22 20 18 25 25 H 1.48507 * 109.47377 * 330.00177 * 22 20 18 26 26 H 1.09003 * 109.47178 * 300.00573 * 1 2 3 27 27 H 1.09004 * 109.47503 * 59.99798 * 1 2 3 28 28 H 1.08999 * 109.47664 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47268 * 240.00129 * 2 1 3 30 30 H 1.09006 * 109.47026 * 120.00019 * 2 1 3 31 31 H 1.08996 * 109.46916 * 60.08263 * 3 2 1 32 32 H 1.09003 * 109.46494 * 300.08697 * 3 2 1 33 33 H 1.08996 * 109.47458 * 168.38517 * 5 4 3 34 34 H 1.09000 * 109.47070 * 48.38306 * 5 4 3 35 35 H 1.08006 * 119.99977 * 180.02562 * 9 7 6 36 36 H 1.07999 * 119.98432 * 179.97438 * 10 9 7 37 37 H 1.08006 * 119.97648 * 180.29560 * 11 10 9 38 38 H 1.08997 * 109.47646 * 192.04096 * 14 4 3 39 39 H 1.09002 * 109.46889 * 312.04518 * 14 4 3 40 40 H 0.96698 * 113.99848 * 299.99832 * 17 15 14 41 41 H 0.96999 * 119.99816 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5089 1.4425 -0.0021 5 6 4.0372 0.8995 1.2565 6 6 3.8005 1.8885 2.3687 7 6 4.6571 2.9639 2.5334 8 9 5.7050 3.1276 1.6966 9 6 4.4387 3.8713 3.5559 10 6 3.3667 3.7033 4.4121 11 6 2.5082 2.6332 4.2439 12 6 2.7280 1.7222 3.2258 13 17 1.6535 0.3743 3.0201 14 6 4.0338 0.7011 -1.1566 15 6 3.7995 1.5119 -2.4328 16 1 4.2051 2.5156 -2.3052 17 8 2.3970 1.5947 -2.6939 18 6 4.4870 0.8358 -3.5909 19 1 5.0365 -0.0803 -3.4324 20 6 4.4154 1.3874 -4.8525 21 7 5.0150 0.7970 -5.8632 22 14 3.4656 2.9723 -5.1264 23 1 4.3742 4.1322 -4.9414 24 1 2.9169 2.9885 -6.5062 25 1 2.3504 3.0564 -4.1492 26 1 -0.3634 0.5139 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5139 0.8900 31 1 1.6780 1.9559 0.8907 32 1 1.6754 1.9568 -0.8893 33 1 5.1070 0.7180 1.1533 34 1 3.5306 -0.0371 1.4892 35 1 5.1062 4.7106 3.6848 36 1 3.1969 4.4112 5.2099 37 1 1.6680 2.5055 4.9104 38 1 5.1025 0.5320 -1.0246 39 1 3.5213 -0.2577 -1.2362 40 1 1.9688 0.7366 -2.8184 41 1 4.9643 1.1849 -6.7508 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000929388728.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:42:48 Heat of formation + Delta-G solvation = -67.242877 kcal Electronic energy + Delta-G solvation = -25219.806707 eV Core-core repulsion = 21461.389441 eV Total energy + Delta-G solvation = -3758.417266 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.114 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.84346 -39.66966 -38.09353 -36.62881 -35.38090 -32.99943 -32.19652 -31.48177 -30.57531 -28.65151 -26.54509 -25.42683 -23.24155 -22.94894 -22.06323 -20.86673 -19.41734 -17.76647 -17.25712 -16.91306 -16.08572 -15.85970 -15.28675 -15.13057 -14.89005 -14.79553 -14.42417 -14.25516 -13.74208 -13.53906 -13.26866 -13.14845 -13.02886 -12.69745 -12.35164 -11.85063 -11.73306 -11.66559 -11.53554 -11.42746 -11.21454 -11.07537 -10.94354 -10.68932 -10.67049 -10.23309 -10.03510 -9.91581 -9.01789 -8.98674 -8.83789 -8.57692 -8.19475 -7.63888 -6.09068 -4.19815 0.81006 0.91656 1.88264 3.23331 3.44325 3.52989 3.79554 4.15278 4.38944 4.51814 4.58257 4.63776 4.76454 5.00985 5.22552 5.25546 5.27368 5.30790 5.45871 5.59630 5.65787 5.77897 5.79452 5.84016 5.91126 5.96874 5.97735 6.01396 6.16214 6.24485 6.25105 6.34766 6.54406 6.56833 6.68453 6.89721 7.29980 7.53367 7.59984 7.78244 8.31882 8.86652 9.05574 9.56219 11.01609 Molecular weight = 315.11amu Principal moments of inertia in cm(-1) A = 0.016360 B = 0.004661 C = 0.004014 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1711.063914 B = 6005.858572 C = 6974.433638 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.166 4.166 3 C 0.043 3.957 4 N -0.524 5.524 5 C 0.078 3.922 6 C -0.095 4.095 7 C 0.136 3.864 8 F -0.122 7.122 9 C -0.155 4.155 10 C -0.085 4.085 11 C -0.127 4.127 12 C -0.008 4.008 13 Cl -0.051 7.051 14 C 0.037 3.963 15 C 0.203 3.797 16 H 0.062 0.938 17 O -0.575 6.575 18 C -0.562 4.562 19 H 0.070 0.930 20 C 0.084 3.916 21 N -0.895 5.895 22 Si 0.873 3.127 23 H -0.288 1.288 24 H -0.298 1.298 25 H -0.216 1.216 26 H 0.047 0.953 27 H 0.057 0.943 28 H 0.045 0.955 29 H 0.068 0.932 30 H 0.059 0.941 31 H 0.056 0.944 32 H 0.110 0.890 33 H 0.084 0.916 34 H 0.057 0.943 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.136 0.864 38 H 0.070 0.930 39 H 0.038 0.962 40 H 0.351 0.649 41 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.524 2.388 22.453 23.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.204 4.204 3 C -0.084 4.084 4 N -0.246 5.246 5 C -0.050 4.050 6 C -0.097 4.097 7 C 0.116 3.884 8 F -0.100 7.100 9 C -0.174 4.174 10 C -0.103 4.103 11 C -0.146 4.146 12 C -0.035 4.035 13 Cl -0.022 7.022 14 C -0.090 4.090 15 C 0.146 3.854 16 H 0.080 0.920 17 O -0.381 6.381 18 C -0.600 4.600 19 H 0.088 0.912 20 C -0.120 4.120 21 N -0.532 5.532 22 Si 0.699 3.301 23 H -0.215 1.215 24 H -0.225 1.225 25 H -0.138 1.138 26 H 0.067 0.933 27 H 0.076 0.924 28 H 0.064 0.936 29 H 0.086 0.914 30 H 0.077 0.923 31 H 0.075 0.925 32 H 0.128 0.872 33 H 0.102 0.898 34 H 0.075 0.925 35 H 0.157 0.843 36 H 0.157 0.843 37 H 0.154 0.846 38 H 0.089 0.911 39 H 0.056 0.944 40 H 0.197 0.803 41 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -6.242 3.396 22.227 23.335 hybrid contribution -0.447 -0.810 -0.436 1.023 sum -6.689 2.586 21.791 22.940 Atomic orbital electron populations 1.21628 0.95965 1.00784 1.01636 1.22295 0.96280 0.99899 1.01951 1.22583 0.86793 0.95313 1.03743 1.62351 1.07881 1.53883 1.00495 1.21128 1.01363 0.93855 0.88667 1.19759 0.94515 0.97537 0.97916 1.17305 0.86328 0.94986 0.89820 1.91568 1.53948 1.94856 1.69613 1.21260 1.00317 1.00121 0.95677 1.20889 0.93465 0.97177 0.98783 1.21047 1.01011 0.94543 0.97966 1.20638 0.93124 0.92212 0.97564 1.98379 1.63184 1.44165 1.96428 1.22932 0.99366 0.95765 0.90921 1.19747 0.79263 0.96439 0.89992 0.91988 1.86663 1.24507 1.33633 1.93322 1.21491 1.34675 1.11557 0.92294 0.91172 1.24978 0.93912 0.97445 0.95671 1.69961 1.42847 1.39949 1.00442 0.87004 0.82733 0.82633 0.77717 1.21468 1.22520 1.13835 0.93349 0.92391 0.93596 0.91391 0.92255 0.92515 0.87231 0.89796 0.92478 0.84251 0.84324 0.84563 0.91107 0.94363 0.80295 0.92659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.77 9.91 37.15 0.37 -1.40 16 2 C -0.17 -2.34 4.51 -26.73 -0.12 -2.46 16 3 C 0.04 0.69 4.34 -3.83 -0.02 0.67 16 4 N -0.52 -9.00 4.61 -236.08 -1.09 -10.09 16 5 C 0.08 1.15 4.50 -4.97 -0.02 1.13 16 6 C -0.09 -1.28 4.82 -104.52 -0.50 -1.78 16 7 C 0.14 1.80 7.25 -39.42 -0.29 1.51 16 8 F -0.12 -1.86 16.65 2.25 0.04 -1.83 16 9 C -0.15 -1.57 10.03 -39.51 -0.40 -1.97 16 10 C -0.08 -0.71 10.04 -39.60 -0.40 -1.11 16 11 C -0.13 -1.18 9.83 -39.54 -0.39 -1.57 16 12 C -0.01 -0.09 5.47 -39.51 -0.22 -0.31 16 13 Cl -0.05 -0.57 22.96 -51.86 -1.19 -1.76 16 14 C 0.04 0.72 4.52 -3.82 -0.02 0.71 16 15 C 0.20 4.70 2.49 -27.88 -0.07 4.63 16 16 H 0.06 1.56 7.57 -51.93 -0.39 1.16 16 17 O -0.58 -12.56 7.16 -35.23 -0.25 -12.81 16 18 C -0.56 -15.53 9.34 -34.44 -0.32 -15.85 16 19 H 0.07 2.09 7.99 -52.49 -0.42 1.67 16 20 C 0.08 2.43 5.47 -17.82 -0.10 2.33 16 21 N -0.89 -27.44 13.96 55.43 0.77 -26.66 16 22 Si 0.87 22.08 26.99 -169.99 -4.59 17.49 16 23 H -0.29 -7.38 7.11 56.52 0.40 -6.98 16 24 H -0.30 -7.60 7.11 56.52 0.40 -7.20 16 25 H -0.22 -5.30 5.31 56.52 0.30 -5.00 16 26 H 0.05 0.57 8.08 -51.93 -0.42 0.15 16 27 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 28 H 0.04 0.53 8.14 -51.93 -0.42 0.10 16 29 H 0.07 1.05 5.73 -51.93 -0.30 0.76 16 30 H 0.06 0.81 4.24 -51.93 -0.22 0.59 16 31 H 0.06 0.87 5.80 -51.93 -0.30 0.57 16 32 H 0.11 1.98 5.53 -51.93 -0.29 1.70 16 33 H 0.08 1.27 7.51 -51.93 -0.39 0.88 16 34 H 0.06 0.81 4.79 -51.93 -0.25 0.56 16 35 H 0.14 1.13 8.06 -52.48 -0.42 0.70 16 36 H 0.14 0.73 8.06 -52.49 -0.42 0.30 16 37 H 0.14 0.97 8.06 -52.48 -0.42 0.54 16 38 H 0.07 1.42 7.72 -51.93 -0.40 1.02 16 39 H 0.04 0.73 5.65 -51.93 -0.29 0.43 16 40 H 0.35 6.94 8.66 45.56 0.39 7.34 16 41 H 0.26 7.64 8.31 -40.82 -0.34 7.30 16 LS Contribution 332.41 15.07 5.01 5.01 Total: -1.00 -30.78 332.41 -8.41 -39.20 By element: Atomic # 1 Polarization: 11.53 SS G_CDS: -4.63 Total: 6.91 kcal Atomic # 6 Polarization: -12.97 SS G_CDS: -2.49 Total: -15.45 kcal Atomic # 7 Polarization: -36.44 SS G_CDS: -0.32 Total: -36.75 kcal Atomic # 8 Polarization: -12.56 SS G_CDS: -0.25 Total: -12.81 kcal Atomic # 9 Polarization: -1.86 SS G_CDS: 0.04 Total: -1.83 kcal Atomic # 14 Polarization: 22.08 SS G_CDS: -4.59 Total: 17.49 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.19 Total: -1.76 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -30.78 -8.41 -39.20 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000929388728.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.048 kcal (2) G-P(sol) polarization free energy of solvation -30.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.243 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds