Wall clock time and date at job start Tue Mar 31 2020 11:03:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08996 * 109.47853 * 2 1 4 4 N 1.46506 * 109.47289 * 119.99984 * 2 1 3 5 5 C 1.34775 * 119.99693 * 275.00198 * 4 2 1 6 6 O 1.21676 * 120.00299 * 359.97438 * 5 4 2 7 7 C 1.46726 * 119.99780 * 179.97438 * 5 4 2 8 8 O 1.35346 * 126.64492 * 0.02562 * 7 5 4 9 9 C 1.33656 * 107.68689 * 180.02562 * 8 7 5 10 10 N 1.30621 * 109.15337 * 359.97438 * 9 8 7 11 11 C 1.33689 * 108.99352 * 359.73416 * 10 9 8 12 12 C 1.50705 * 126.27125 * 180.27355 * 11 10 9 13 13 F 1.39899 * 109.46957 * 120.18952 * 12 11 10 14 14 F 1.39902 * 109.46342 * 240.18569 * 12 11 10 15 15 C 1.52999 * 109.47317 * 239.99669 * 2 1 3 16 16 C 1.53945 * 113.74529 * 158.73809 * 15 2 1 17 17 N 1.47807 * 86.04084 * 222.08774 * 16 15 2 18 18 C 1.36936 * 134.45937 * 204.64279 * 17 16 15 19 19 H 1.08005 * 120.00346 * 179.86277 * 18 17 16 20 20 C 1.38811 * 119.99896 * 359.87268 * 18 17 16 21 21 N 1.31623 * 120.00001 * 359.97438 * 20 18 17 22 22 Si 1.86798 * 120.00199 * 179.97438 * 20 18 17 23 23 H 1.48507 * 109.47031 * 359.97438 * 22 20 18 24 24 H 1.48504 * 109.47325 * 119.99616 * 22 20 18 25 25 H 1.48504 * 109.47317 * 239.99651 * 22 20 18 26 26 C 1.47576 * 91.04962 * 24.54882 * 17 16 15 27 27 H 1.09002 * 109.47153 * 59.99972 * 1 2 3 28 28 H 1.09001 * 109.46832 * 300.00163 * 1 2 3 29 29 H 1.09004 * 109.47261 * 180.02562 * 1 2 3 30 30 H 0.97000 * 120.00117 * 94.99845 * 4 2 1 31 31 H 1.08001 * 125.42155 * 180.02562 * 9 8 7 32 32 H 1.08995 * 109.46892 * 0.18485 * 12 11 10 33 33 H 1.09002 * 112.94852 * 290.34047 * 15 2 1 34 34 H 1.08997 * 113.76654 * 336.35575 * 16 15 2 35 35 H 1.09002 * 113.76615 * 107.75050 * 16 15 2 36 36 H 0.96992 * 119.99763 * 180.02562 * 21 20 18 37 37 H 1.09006 * 113.77253 * 221.14869 * 26 17 16 38 38 H 1.09000 * 113.87108 * 89.76663 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0184 -0.6906 1.1962 5 6 2.1470 -0.0182 2.3571 6 8 1.8581 1.1625 2.4117 7 6 2.6356 -0.7100 3.5553 8 8 2.9941 -2.0119 3.6467 9 6 3.3787 -2.2398 4.9062 10 7 3.2728 -1.1339 5.5934 11 6 2.8223 -0.1644 4.7907 12 6 2.5640 1.2681 5.1811 13 9 3.3629 2.1143 4.4047 14 9 1.2156 1.5737 4.9670 15 6 2.0400 -0.7213 -1.2492 16 6 3.4848 -0.3521 -1.6317 17 7 2.9978 -0.3178 -3.0268 18 6 3.5875 -0.4758 -4.2526 19 1 2.9927 -0.4039 -5.1513 20 6 4.9495 -0.7285 -4.3402 21 7 5.6744 -0.8158 -3.2450 22 14 5.7538 -0.9448 -6.0122 23 1 4.7284 -0.8020 -7.0769 24 1 6.8040 0.0893 -6.1939 25 1 6.3682 -2.2942 -6.0952 26 6 1.6214 -0.0473 -2.5684 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 2.2491 -1.6318 1.1527 31 1 3.7232 -3.1871 5.2939 32 1 2.8051 1.4066 6.2349 33 1 1.8528 -1.7949 -1.2263 34 1 3.8047 0.6190 -1.2540 35 1 4.2071 -1.1448 -1.4367 36 1 6.6263 -0.9920 -3.3063 37 1 0.8586 -0.5970 -3.1200 38 1 1.3909 1.0131 -2.4661 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970429468.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:25 Heat of formation + Delta-G solvation = -50.844110 kcal Electronic energy + Delta-G solvation = -26499.818006 eV Core-core repulsion = 22210.235125 eV Total energy + Delta-G solvation = -4289.582881 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.118 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -49.01130 -47.01657 -43.91341 -39.85075 -38.11630 -35.76340 -34.88052 -32.33788 -31.63313 -30.33263 -27.56261 -27.27997 -25.03062 -24.34605 -23.80887 -22.54515 -21.35611 -20.62024 -19.53455 -18.46120 -17.63885 -17.45483 -17.37287 -16.86662 -16.77591 -16.24463 -15.86352 -14.95054 -14.85245 -14.57888 -14.35869 -13.87098 -13.85450 -13.59271 -13.34851 -13.12357 -12.90063 -12.50886 -12.19908 -12.01702 -11.72442 -11.64781 -11.41361 -11.33522 -11.29700 -10.94597 -10.77404 -10.43687 -10.34077 -9.89133 -9.82325 -9.62081 -9.45567 -8.98414 -8.82123 -6.89662 -5.78487 -3.10856 0.34052 1.85980 1.97767 2.86440 2.99913 3.05402 3.37667 3.43031 3.45625 3.84216 4.02273 4.26183 4.43252 4.72564 4.85540 4.95171 5.02286 5.08734 5.20327 5.23116 5.48732 5.49771 5.59169 5.70786 5.88257 5.95176 6.15622 6.28083 6.34834 6.46558 6.59047 6.69855 6.92040 7.20566 7.32498 7.38009 7.53496 7.95549 7.96514 9.02950 9.69347 10.57885 11.38733 Molecular weight = 315.12amu Principal moments of inertia in cm(-1) A = 0.019309 B = 0.003185 C = 0.003033 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1449.788834 B = 8788.128230 C = 9229.651887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.150 3.850 3 H 0.093 0.907 4 N -0.698 5.698 5 C 0.595 3.405 6 O -0.493 6.493 7 C -0.040 4.040 8 O -0.179 6.179 9 C 0.206 3.794 10 N -0.473 5.473 11 C -0.024 4.024 12 C 0.362 3.638 13 F -0.180 7.180 14 F -0.183 7.183 15 C -0.148 4.148 16 C 0.170 3.830 17 N -0.612 5.612 18 C -0.223 4.223 19 H 0.081 0.919 20 C -0.008 4.008 21 N -0.922 5.922 22 Si 0.911 3.089 23 H -0.279 1.279 24 H -0.290 1.290 25 H -0.290 1.290 26 C 0.131 3.869 27 H 0.071 0.929 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.405 0.595 31 H 0.264 0.736 32 H 0.130 0.870 33 H 0.089 0.911 34 H 0.027 0.973 35 H 0.072 0.928 36 H 0.253 0.747 37 H 0.045 0.955 38 H 0.036 0.964 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.939 -3.267 18.937 20.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.046 3.954 3 H 0.111 0.889 4 N -0.348 5.348 5 C 0.377 3.623 6 O -0.369 6.369 7 C -0.098 4.098 8 O -0.064 6.064 9 C -0.020 4.020 10 N -0.200 5.200 11 C -0.148 4.148 12 C 0.307 3.693 13 F -0.161 7.161 14 F -0.164 7.164 15 C -0.168 4.168 16 C 0.044 3.956 17 N -0.338 5.338 18 C -0.351 4.351 19 H 0.098 0.902 20 C -0.204 4.204 21 N -0.569 5.569 22 Si 0.742 3.258 23 H -0.204 1.204 24 H -0.217 1.217 25 H -0.217 1.217 26 C 0.005 3.995 27 H 0.090 0.910 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.240 0.760 31 H 0.279 0.721 32 H 0.147 0.853 33 H 0.107 0.893 34 H 0.045 0.955 35 H 0.090 0.910 36 H 0.063 0.937 37 H 0.064 0.936 38 H 0.054 0.946 Dipole moment (debyes) X Y Z Total from point charges -7.754 -2.425 19.263 20.906 hybrid contribution 0.650 -0.784 -1.539 1.845 sum -7.104 -3.209 17.724 19.362 Atomic orbital electron populations 1.22144 0.95144 1.01993 1.02478 1.21269 0.93831 0.97745 0.82595 0.88871 1.46016 1.65341 1.14350 1.09117 1.16368 0.78935 0.85967 0.80994 1.90973 1.49420 1.13297 1.83208 1.23418 1.06095 0.81959 0.98281 1.84580 1.61764 1.26698 1.33376 1.28393 0.96575 1.00009 0.77004 1.70146 1.17467 0.98910 1.33486 1.22401 1.04325 0.97864 0.90214 1.19171 0.73834 0.80954 0.95292 1.93087 1.73192 1.71514 1.78337 1.93063 1.33620 1.93332 1.96380 1.23859 1.01091 0.99746 0.92094 1.22312 0.91262 0.98599 0.83399 1.45991 1.03269 1.82583 1.02003 1.19081 0.91472 1.41532 0.82965 0.90165 1.24783 0.96035 1.02344 0.97287 1.69826 1.06044 1.55262 1.25754 0.86055 0.79323 0.77383 0.83051 1.20437 1.21723 1.21715 1.22483 0.89714 0.96684 0.90635 0.90992 0.92541 0.92583 0.76026 0.72060 0.85280 0.89254 0.95508 0.91014 0.93707 0.93649 0.94628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.03 9.31 37.16 0.35 -1.69 16 2 C 0.15 2.24 2.38 -67.93 -0.16 2.08 16 3 H 0.09 1.60 7.41 -51.93 -0.38 1.21 16 4 N -0.70 -9.55 5.07 -55.10 -0.28 -9.83 16 5 C 0.59 8.87 7.75 -12.83 -0.10 8.77 16 6 O -0.49 -8.69 13.59 5.21 0.07 -8.62 16 7 C -0.04 -0.51 7.18 -36.84 -0.26 -0.78 16 8 O -0.18 -1.81 10.57 4.44 0.05 -1.76 16 9 C 0.21 1.54 13.21 52.25 0.69 2.23 16 10 N -0.47 -4.91 11.26 -10.89 -0.12 -5.03 16 11 C -0.02 -0.29 6.59 -82.47 -0.54 -0.83 16 12 C 0.36 4.33 5.10 36.01 0.18 4.51 16 13 F -0.18 -2.63 16.21 2.25 0.04 -2.59 16 14 F -0.18 -2.50 16.18 2.25 0.04 -2.47 16 15 C -0.15 -2.57 3.47 -89.69 -0.31 -2.88 16 16 C 0.17 3.91 7.08 -2.84 -0.02 3.89 16 17 N -0.61 -15.56 3.70 -177.69 -0.66 -16.22 16 18 C -0.22 -6.25 10.70 -15.06 -0.16 -6.41 16 19 H 0.08 2.17 7.83 -52.48 -0.41 1.76 16 20 C -0.01 -0.23 5.50 -17.43 -0.10 -0.33 16 21 N -0.92 -27.35 11.39 55.49 0.63 -26.72 16 22 Si 0.91 22.13 29.55 -169.99 -5.02 17.10 16 23 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 24 H -0.29 -7.12 7.11 56.52 0.40 -6.71 16 25 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 26 C 0.13 2.58 7.64 -2.97 -0.02 2.56 16 27 H 0.07 0.88 7.52 -51.93 -0.39 0.49 16 28 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 29 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 30 H 0.40 4.78 8.40 -40.82 -0.34 4.44 16 31 H 0.26 0.40 8.06 -52.49 -0.42 -0.02 16 32 H 0.13 1.04 8.14 -51.93 -0.42 0.62 16 33 H 0.09 1.48 8.14 -51.93 -0.42 1.06 16 34 H 0.03 0.66 7.99 -51.93 -0.41 0.24 16 35 H 0.07 1.82 7.17 -51.93 -0.37 1.45 16 36 H 0.25 7.26 8.31 -40.82 -0.34 6.93 16 37 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 38 H 0.04 0.68 8.10 -51.93 -0.42 0.26 16 LS Contribution 336.25 15.07 5.07 5.07 Total: -1.00 -35.00 336.25 -5.06 -40.07 By element: Atomic # 1 Polarization: 4.30 SS G_CDS: -4.41 Total: -0.11 kcal Atomic # 6 Polarization: 11.56 SS G_CDS: -0.46 Total: 11.10 kcal Atomic # 7 Polarization: -57.36 SS G_CDS: -0.43 Total: -57.79 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: 0.12 Total: -10.38 kcal Atomic # 9 Polarization: -5.13 SS G_CDS: 0.07 Total: -5.06 kcal Atomic # 14 Polarization: 22.13 SS G_CDS: -5.02 Total: 17.10 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -35.00 -5.06 -40.07 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970429468.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.779 kcal (2) G-P(sol) polarization free energy of solvation -35.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds