Wall clock time and date at job start Tue Mar 31 2020 10:28:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.47173 * 2 1 4 4 C 1.52994 * 109.47154 * 180.02562 * 3 2 1 5 5 N 1.46903 * 109.47147 * 181.06013 * 4 3 2 6 6 C 1.46900 * 111.00032 * 303.57601 * 5 4 3 7 7 C 1.50698 * 109.47380 * 293.43510 * 6 5 4 8 8 H 1.08009 * 119.99824 * 4.38576 * 7 6 5 9 9 C 1.37875 * 120.00317 * 184.38613 * 7 6 5 10 10 N 1.31517 * 119.99742 * 359.97438 * 9 7 6 11 11 Si 1.86800 * 120.00111 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.46664 * 90.00084 * 11 9 7 13 13 H 1.48496 * 109.47091 * 209.99924 * 11 9 7 14 14 H 1.48497 * 109.47192 * 330.00529 * 11 9 7 15 15 C 1.46895 * 111.00064 * 67.53107 * 5 4 3 16 16 C 1.50702 * 109.47303 * 75.01222 * 15 5 4 17 17 C 1.38717 * 120.02272 * 81.41034 * 16 15 5 18 18 O 1.35938 * 120.02137 * 359.95800 * 17 16 15 19 19 C 1.38687 * 119.95006 * 179.97438 * 17 16 15 20 20 C 1.38184 * 119.99334 * 359.97438 * 19 17 16 21 21 C 1.38399 * 120.04544 * 359.97438 * 20 19 17 22 22 F 1.35099 * 119.97484 * 180.02562 * 21 20 19 23 23 C 1.38230 * 120.02081 * 261.13544 * 16 15 5 24 24 Cl 1.73601 * 119.99673 * 0.02562 * 23 16 15 25 25 H 1.09005 * 109.47138 * 300.00291 * 1 2 3 26 26 H 1.08999 * 109.47622 * 59.99644 * 1 2 3 27 27 H 1.08995 * 109.47042 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.46983 * 240.00273 * 2 1 3 29 29 H 1.08997 * 109.47163 * 120.00099 * 2 1 3 30 30 H 1.08996 * 109.46943 * 60.00249 * 3 2 1 31 31 H 1.09006 * 109.46898 * 300.00016 * 3 2 1 32 32 H 1.08997 * 109.47444 * 61.05820 * 4 3 2 33 33 H 1.08999 * 109.47570 * 301.05842 * 4 3 2 34 34 H 1.09005 * 109.47222 * 53.43686 * 6 5 4 35 35 H 1.09004 * 109.46905 * 173.43305 * 6 5 4 36 36 H 0.96996 * 119.99703 * 180.02562 * 10 9 7 37 37 H 1.08999 * 109.47609 * 195.01238 * 15 5 4 38 38 H 1.09004 * 109.47160 * 315.01443 * 15 5 4 39 39 H 0.96702 * 114.00580 * 90.00091 * 18 17 16 40 40 H 1.07999 * 120.00286 * 180.02562 * 19 17 16 41 41 H 1.07999 * 119.97751 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 3.5699 1.4425 -0.0006 5 7 4.0596 2.8273 0.0250 6 6 3.5196 3.5976 -1.1032 7 6 4.0770 3.0558 -2.3942 8 1 4.7074 2.1788 -2.3843 9 6 3.7823 3.6794 -3.5880 10 7 3.0143 4.7470 -3.6001 11 14 4.4740 3.0081 -5.1882 12 1 3.5276 2.0160 -5.7587 13 1 4.6635 4.1222 -6.1515 14 1 5.7803 2.3524 -4.9263 15 6 3.7415 3.4746 1.3047 16 6 4.6669 2.9546 2.3744 17 6 5.9459 3.4769 2.4996 18 8 6.3656 4.4575 1.6569 19 6 6.7961 2.9977 3.4849 20 6 6.3687 2.0010 4.3413 21 6 5.0922 1.4808 4.2169 22 9 4.6756 0.5067 5.0552 23 6 4.2399 1.9609 3.2351 24 17 2.6372 1.3110 3.0835 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8899 30 1 1.6767 1.9563 0.8900 31 1 1.6766 1.9564 -0.8900 32 1 3.9329 0.9454 -0.9001 33 1 3.9337 0.9122 0.8794 34 1 2.4328 3.5140 -1.1133 35 1 3.8023 4.6449 -0.9965 36 1 2.8067 5.1855 -4.4400 37 1 3.8678 4.5529 1.2078 38 1 2.7098 3.2526 1.5776 39 1 6.1825 5.3529 1.9730 40 1 7.7919 3.4040 3.5835 41 1 7.0308 1.6283 5.1088 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001237124442.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:28:37 Heat of formation + Delta-G solvation = -70.853088 kcal Electronic energy + Delta-G solvation = -24967.122390 eV Core-core repulsion = 21208.548573 eV Total energy + Delta-G solvation = -3758.573817 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 315.114 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.98148 -39.99269 -37.48650 -36.82982 -36.00077 -33.94080 -32.72081 -31.34264 -29.45463 -28.23324 -27.15493 -24.92395 -23.31083 -22.79541 -21.75799 -21.09378 -19.34732 -18.39912 -17.26047 -17.10229 -16.17455 -16.01046 -15.53204 -15.23346 -14.71522 -14.66008 -14.48679 -13.93272 -13.82312 -13.72234 -13.22418 -13.06735 -12.57786 -12.44662 -12.22972 -12.09317 -11.85170 -11.43438 -11.10661 -11.07952 -11.04437 -10.75933 -10.70247 -10.66762 -10.48003 -10.41573 -10.34266 -9.79840 -9.66787 -9.18967 -8.84497 -8.48272 -8.38531 -7.12086 -5.98978 -3.98536 0.86444 0.97824 2.02626 3.24740 3.34295 3.40573 3.45717 4.00118 4.19165 4.46717 4.55380 4.82164 4.99142 5.15155 5.37156 5.38086 5.41276 5.43675 5.55955 5.59492 5.72514 5.80248 5.89015 6.00451 6.07359 6.16634 6.18581 6.26613 6.32454 6.38101 6.50504 6.53882 6.60220 6.83274 7.02377 7.33455 7.42947 7.73919 7.83916 8.11866 8.24596 8.57926 9.08051 9.64817 11.11927 Molecular weight = 315.11amu Principal moments of inertia in cm(-1) A = 0.013219 B = 0.005098 C = 0.003995 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2117.618477 B = 5490.531103 C = 7006.317894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.117 4.117 3 C -0.157 4.157 4 C 0.066 3.934 5 N -0.518 5.518 6 C 0.192 3.808 7 C -0.498 4.498 8 H 0.061 0.939 9 C 0.056 3.944 10 N -0.900 5.900 11 Si 0.894 3.106 12 H -0.282 1.282 13 H -0.288 1.288 14 H -0.273 1.273 15 C 0.084 3.916 16 C -0.054 4.054 17 C 0.134 3.866 18 O -0.471 6.471 19 C -0.118 4.118 20 C -0.136 4.136 21 C 0.092 3.908 22 F -0.131 7.131 23 C -0.059 4.059 24 Cl -0.039 7.039 25 H 0.046 0.954 26 H 0.054 0.946 27 H 0.046 0.954 28 H 0.060 0.940 29 H 0.052 0.948 30 H 0.055 0.945 31 H 0.078 0.922 32 H 0.077 0.923 33 H 0.050 0.950 34 H -0.002 1.002 35 H 0.031 0.969 36 H 0.260 0.740 37 H 0.081 0.919 38 H 0.050 0.950 39 H 0.388 0.612 40 H 0.142 0.858 41 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.265 -3.848 16.710 17.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.155 4.155 3 C -0.196 4.196 4 C -0.063 4.063 5 N -0.241 5.241 6 C 0.067 3.933 7 C -0.537 4.537 8 H 0.079 0.921 9 C -0.145 4.145 10 N -0.540 5.540 11 Si 0.722 3.278 12 H -0.209 1.209 13 H -0.213 1.213 14 H -0.198 1.198 15 C -0.044 4.044 16 C -0.056 4.056 17 C 0.088 3.912 18 O -0.280 6.280 19 C -0.137 4.137 20 C -0.155 4.155 21 C 0.072 3.928 22 F -0.110 7.110 23 C -0.087 4.087 24 Cl -0.010 7.010 25 H 0.065 0.935 26 H 0.073 0.927 27 H 0.065 0.935 28 H 0.079 0.921 29 H 0.071 0.929 30 H 0.073 0.927 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.069 0.931 34 H 0.015 0.985 35 H 0.049 0.951 36 H 0.069 0.931 37 H 0.099 0.901 38 H 0.068 0.932 39 H 0.244 0.756 40 H 0.160 0.840 41 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.736 -4.262 16.176 16.950 hybrid contribution -0.887 -0.131 -0.465 1.010 sum 1.849 -4.393 15.711 16.418 Atomic orbital electron populations 1.21757 0.96682 1.00663 1.01537 1.21416 0.95098 0.97701 1.01295 1.22295 0.98661 0.96269 1.02374 1.22064 0.91858 0.91164 1.01194 1.62361 1.59154 1.01985 1.00570 1.19814 0.93336 0.93257 0.86851 1.21111 1.29783 1.12425 0.90365 0.92068 1.24935 0.95447 0.95026 0.99077 1.69950 1.37514 1.19993 1.26563 0.86552 0.79487 0.78421 0.83297 1.20852 1.21347 1.19829 1.21010 0.94709 0.99151 0.89500 1.20201 0.95236 0.94695 0.95444 1.18094 0.90232 0.93105 0.89799 1.85013 1.81569 1.16528 1.44904 1.21368 1.00763 0.97691 0.93882 1.20864 0.94093 0.98705 1.01827 1.17334 0.93475 0.90703 0.91306 1.91514 1.90464 1.59767 1.69227 1.20791 0.88975 0.99895 0.99086 1.98386 1.20791 1.84749 1.97043 0.93480 0.92651 0.93479 0.92128 0.92919 0.92678 0.90388 0.90485 0.93150 0.98477 0.95125 0.93061 0.90050 0.93222 0.75596 0.83992 0.83830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.08 9.91 37.16 0.37 -1.71 16 2 C -0.12 -1.82 5.93 -26.73 -0.16 -1.98 16 3 C -0.16 -2.84 3.84 -26.73 -0.10 -2.94 16 4 C 0.07 1.28 4.59 -3.83 -0.02 1.27 16 5 N -0.52 -10.91 4.62 -237.52 -1.10 -12.01 16 6 C 0.19 4.83 4.40 -4.98 -0.02 4.80 16 7 C -0.50 -13.79 8.65 -34.44 -0.30 -14.09 16 8 H 0.06 1.71 6.97 -52.48 -0.37 1.34 16 9 C 0.06 1.57 5.46 -17.82 -0.10 1.48 16 10 N -0.90 -26.39 13.29 55.43 0.74 -25.65 16 11 Si 0.89 21.74 29.54 -169.99 -5.02 16.72 16 12 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 13 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 14 H -0.27 -6.60 7.11 56.52 0.40 -6.20 16 15 C 0.08 1.48 4.47 -4.98 -0.02 1.46 16 16 C -0.05 -0.82 4.94 -104.45 -0.52 -1.33 16 17 C 0.13 1.84 6.68 -39.24 -0.26 1.57 16 18 O -0.47 -6.55 12.71 -19.55 -0.25 -6.80 16 19 C -0.12 -1.31 9.98 -39.44 -0.39 -1.70 16 20 C -0.14 -1.46 10.02 -39.54 -0.40 -1.86 16 21 C 0.09 1.20 7.27 -39.39 -0.29 0.92 16 22 F -0.13 -1.74 16.83 2.25 0.04 -1.70 16 23 C -0.06 -0.86 5.58 -39.45 -0.22 -1.08 16 24 Cl -0.04 -0.56 22.98 -51.86 -1.19 -1.75 16 25 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 26 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 27 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 28 H 0.06 0.96 8.14 -51.93 -0.42 0.53 16 29 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 30 H 0.05 0.96 4.74 -51.93 -0.25 0.71 16 31 H 0.08 1.65 6.27 -51.93 -0.33 1.33 16 32 H 0.08 1.65 6.91 -51.93 -0.36 1.30 16 33 H 0.05 0.92 5.68 -51.93 -0.29 0.63 16 34 H 0.00 -0.06 5.90 -51.93 -0.31 -0.37 16 35 H 0.03 0.83 7.82 -51.93 -0.41 0.43 16 36 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 37 H 0.08 1.39 7.41 -51.93 -0.38 1.01 16 38 H 0.05 0.86 4.64 -51.93 -0.24 0.62 16 39 H 0.39 3.38 9.06 45.56 0.41 3.79 16 40 H 0.14 1.20 8.06 -52.49 -0.42 0.78 16 41 H 0.14 1.14 8.06 -52.49 -0.42 0.72 16 LS Contribution 343.55 15.07 5.18 5.18 Total: -1.00 -30.87 343.55 -8.64 -39.51 By element: Atomic # 1 Polarization: 6.31 SS G_CDS: -4.61 Total: 1.70 kcal Atomic # 6 Polarization: -12.78 SS G_CDS: -2.42 Total: -15.20 kcal Atomic # 7 Polarization: -37.30 SS G_CDS: -0.36 Total: -37.66 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -0.25 Total: -6.80 kcal Atomic # 9 Polarization: -1.74 SS G_CDS: 0.04 Total: -1.70 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -5.02 Total: 16.72 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.19 Total: -1.75 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -30.87 -8.64 -39.51 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001237124442.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.340 kcal (2) G-P(sol) polarization free energy of solvation -30.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.853 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds