Wall clock time and date at job start Tue Mar 31 2020 10:59:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30191 * 126.21265 * 2 1 4 4 N 1.39803 * 110.13986 * 180.02562 * 3 2 1 5 5 C 1.46493 * 125.34008 * 179.97438 * 4 3 2 6 6 C 1.36621 * 109.31707 * 359.97438 * 4 3 2 7 7 N 1.32944 * 133.25259 * 180.32262 * 6 4 3 8 8 C 1.31183 * 121.84669 * 180.16335 * 7 6 4 9 9 C 1.40234 * 121.36686 * 359.47243 * 8 7 6 10 10 C 1.47555 * 120.41409 * 180.28322 * 9 8 7 11 11 O 1.21490 * 119.99966 * 174.89503 * 10 9 8 12 12 O 1.34729 * 119.99969 * 354.88486 * 10 9 8 13 13 C 1.45205 * 117.00018 * 184.88558 * 12 10 9 14 14 C 1.53002 * 109.47143 * 183.70730 * 13 12 10 15 15 C 1.50694 * 115.55211 * 306.33100 * 14 13 12 16 16 H 1.08002 * 119.99890 * 144.82236 * 15 14 13 17 17 C 1.37878 * 119.99932 * 324.82464 * 15 14 13 18 18 N 1.31515 * 120.00236 * 345.10510 * 17 15 14 19 19 Si 1.86801 * 119.99747 * 165.11097 * 17 15 14 20 20 H 1.48497 * 109.47443 * 359.97438 * 19 17 15 21 21 H 1.48506 * 109.46925 * 119.99868 * 19 17 15 22 22 H 1.48509 * 109.47076 * 239.99489 * 19 17 15 23 23 C 1.52996 * 117.49527 * 160.65693 * 14 13 12 24 24 C 1.53003 * 117.49396 * 91.99934 * 14 13 12 25 25 C 1.39577 * 119.16895 * 0.25490 * 9 8 7 26 26 C 1.39628 * 117.94396 * 0.02562 * 25 9 8 27 27 H 1.08992 * 109.47396 * 269.96355 * 1 2 3 28 28 H 1.09009 * 109.46520 * 29.96139 * 1 2 3 29 29 H 1.08998 * 109.46999 * 149.95702 * 1 2 3 30 30 H 1.09001 * 109.47287 * 269.99748 * 5 4 3 31 31 H 1.09003 * 109.47383 * 29.99939 * 5 4 3 32 32 H 1.09006 * 109.47309 * 150.00016 * 5 4 3 33 33 H 1.07998 * 119.31502 * 179.75302 * 8 7 6 34 34 H 1.08999 * 109.47363 * 303.71095 * 13 12 10 35 35 H 1.09001 * 109.46801 * 63.71386 * 13 12 10 36 36 H 0.96994 * 119.99842 * 185.03329 * 18 17 15 37 37 H 1.08997 * 117.50227 * 0.02562 * 23 14 13 38 38 H 1.09008 * 117.49625 * 145.02138 * 23 14 13 39 39 H 1.08993 * 117.49631 * 214.97442 * 24 14 13 40 40 H 1.08999 * 117.50115 * 359.97438 * 24 14 13 41 41 H 1.07996 * 121.02272 * 179.97438 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2762 1.0504 0.0000 4 7 3.6195 0.6634 -0.0006 5 6 4.7646 1.5770 -0.0013 6 6 3.6969 -0.7007 -0.0004 7 7 4.7151 -1.5554 0.0047 8 6 4.5289 -2.8539 0.0004 9 6 3.2400 -3.4065 0.0011 10 6 3.0549 -4.8704 0.0025 11 8 1.9390 -5.3414 0.0967 12 8 4.1233 -5.6846 -0.1010 13 6 3.8594 -7.1088 -0.2029 14 6 5.1846 -7.8733 -0.2184 15 6 6.1788 -7.4297 -1.2604 16 1 7.2360 -7.4480 -1.0405 17 6 5.7386 -7.0004 -2.4945 18 7 4.5037 -7.2461 -2.8743 19 14 6.8965 -6.0698 -3.6272 20 1 8.2201 -5.9233 -2.9702 21 1 7.0547 -6.8206 -4.8986 22 1 6.3347 -4.7251 -3.9131 23 6 5.1455 -9.3620 0.1321 24 6 5.7367 -8.3572 1.1240 25 6 2.1346 -2.5544 0.0012 26 6 2.3694 -1.1780 -0.0001 27 1 -0.3634 -0.0007 1.0276 28 1 -0.3633 0.8904 -0.5133 29 1 -0.3633 -0.8896 -0.5145 30 1 5.0482 1.8035 -1.0291 31 1 4.4938 2.4995 0.5125 32 1 5.6040 1.1081 0.5122 33 1 5.3860 -3.5110 0.0007 34 1 3.2645 -7.4302 0.6521 35 1 3.3121 -7.3119 -1.1234 36 1 4.2155 -7.0093 -3.7696 37 1 4.1756 -9.7970 0.3734 38 1 5.8391 -10.0206 -0.3908 39 1 6.8190 -8.3551 1.2532 40 1 5.1561 -8.1305 2.0182 41 1 1.1287 -2.9476 0.0013 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000174738776.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:59:45 Heat of formation + Delta-G solvation = 44.952527 kcal Electronic energy + Delta-G solvation = -25745.697118 eV Core-core repulsion = 22014.497821 eV Total energy + Delta-G solvation = -3731.199297 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.72986 -39.63898 -37.98533 -36.71450 -35.12104 -34.53417 -32.18151 -31.94117 -30.57238 -29.75962 -26.98105 -25.91764 -25.29527 -23.89869 -23.46739 -21.27304 -20.65690 -20.01204 -19.21221 -17.82095 -17.55178 -16.79559 -16.12033 -16.07015 -15.90374 -15.44284 -15.02373 -14.60376 -13.85466 -13.84095 -13.81741 -13.55871 -13.43066 -13.11023 -13.00928 -12.94744 -12.50768 -12.16924 -12.09261 -11.85825 -11.62879 -11.16208 -10.99109 -10.85504 -10.50679 -10.50465 -10.35392 -10.18784 -9.62921 -9.54376 -9.39415 -9.15580 -9.11482 -8.77487 -8.37737 -8.12024 -6.09822 -4.10030 0.64674 0.79280 1.94130 2.20293 2.95300 3.25457 3.34324 3.36108 3.39328 3.86829 3.92017 4.14082 4.27533 4.35368 4.79123 4.86058 4.92318 4.94757 5.03577 5.11803 5.20121 5.29271 5.29460 5.46753 5.49092 5.58602 5.66008 5.97668 6.05060 6.09952 6.19148 6.33368 6.43301 6.58781 6.63284 6.64565 6.78180 6.95034 7.24129 7.26146 7.34947 7.42460 7.78282 7.87131 8.31645 8.51660 8.84460 9.49056 10.93486 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.015589 B = 0.003873 C = 0.003491 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1795.739564 B = 7226.977708 C = 8017.773766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.121 3.879 3 N -0.247 5.247 4 N -0.395 5.395 5 C 0.112 3.888 6 C 0.334 3.666 7 N -0.511 5.511 8 C 0.230 3.770 9 C -0.208 4.208 10 C 0.512 3.488 11 O -0.524 6.524 12 O -0.320 6.320 13 C 0.117 3.883 14 C 0.048 3.952 15 C -0.485 4.485 16 H 0.064 0.936 17 C 0.078 3.922 18 N -0.880 5.880 19 Si 0.889 3.111 20 H -0.270 1.270 21 H -0.285 1.285 22 H -0.281 1.281 23 C -0.192 4.192 24 C -0.209 4.209 25 C 0.070 3.930 26 C -0.241 4.241 27 H 0.087 0.913 28 H 0.081 0.919 29 H 0.086 0.914 30 H 0.071 0.929 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.189 0.811 34 H 0.032 0.968 35 H 0.111 0.889 36 H 0.263 0.737 37 H 0.067 0.933 38 H 0.084 0.916 39 H 0.079 0.921 40 H 0.069 0.931 41 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.093 14.335 5.722 16.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.058 4.058 3 N -0.061 5.061 4 N -0.184 5.184 5 C -0.029 4.029 6 C 0.095 3.905 7 N -0.226 5.226 8 C 0.060 3.940 9 C -0.213 4.213 10 C 0.356 3.644 11 O -0.416 6.416 12 O -0.234 6.234 13 C 0.044 3.956 14 C 0.048 3.952 15 C -0.522 4.522 16 H 0.082 0.918 17 C -0.125 4.125 18 N -0.517 5.517 19 Si 0.717 3.283 20 H -0.194 1.194 21 H -0.211 1.211 22 H -0.207 1.207 23 C -0.230 4.230 24 C -0.246 4.246 25 C 0.043 3.957 26 C -0.250 4.250 27 H 0.105 0.895 28 H 0.100 0.900 29 H 0.105 0.895 30 H 0.089 0.911 31 H 0.105 0.895 32 H 0.110 0.890 33 H 0.205 0.795 34 H 0.050 0.950 35 H 0.129 0.871 36 H 0.073 0.927 37 H 0.085 0.915 38 H 0.102 0.898 39 H 0.097 0.903 40 H 0.087 0.913 41 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -4.505 16.090 5.623 17.630 hybrid contribution -0.133 -0.823 -0.699 1.088 sum -4.638 15.267 4.924 16.698 Atomic orbital electron populations 1.20324 0.85049 1.04311 1.03876 1.23531 0.96837 0.88118 0.97308 1.76640 0.86355 1.22825 1.20275 1.47995 1.04532 1.01653 1.64222 1.21828 0.84704 0.92970 1.03355 1.19238 0.90520 0.86319 0.94431 1.66848 1.32452 1.03140 1.20115 1.23323 0.96801 0.88807 0.85030 1.20019 0.95171 0.92049 1.14095 1.20515 0.83524 0.87039 0.73292 1.90761 1.25998 1.77492 1.47391 1.86523 1.34292 1.21459 1.81141 1.22834 0.97901 0.73347 1.01517 1.18872 0.93352 0.90492 0.92512 1.20431 0.91974 1.42887 0.96871 0.91803 1.24899 0.95000 0.94854 0.97774 1.69829 1.17068 1.46185 1.18637 0.86577 0.81301 0.80136 0.80311 1.19437 1.21140 1.20705 1.22968 1.00332 0.95193 1.04490 1.22973 0.99477 1.08019 0.94167 1.21122 0.99713 0.89409 0.85505 1.20248 0.93780 0.94385 1.16625 0.89488 0.89967 0.89505 0.91053 0.89471 0.88972 0.79472 0.95022 0.87138 0.92720 0.91483 0.89764 0.90267 0.91274 0.82858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.60 10.48 36.01 0.38 -0.22 16 2 C 0.12 1.47 7.44 -80.18 -0.60 0.87 16 3 N -0.25 -3.26 12.39 34.84 0.43 -2.83 16 4 N -0.39 -5.33 4.03 -67.17 -0.27 -5.60 16 5 C 0.11 1.06 11.43 59.84 0.68 1.74 16 6 C 0.33 5.16 7.96 -156.08 -1.24 3.91 16 7 N -0.51 -8.28 10.37 -12.01 -0.12 -8.41 16 8 C 0.23 3.81 10.76 -17.08 -0.18 3.62 16 9 C -0.21 -3.58 5.89 -104.85 -0.62 -4.19 16 10 C 0.51 10.49 7.88 34.53 0.27 10.76 16 11 O -0.52 -11.50 16.13 -19.26 -0.31 -11.81 16 12 O -0.32 -7.23 9.13 -40.57 -0.37 -7.60 16 13 C 0.12 2.77 4.66 37.16 0.17 2.95 16 14 C 0.05 1.16 2.10 -155.66 -0.33 0.83 16 15 C -0.48 -12.71 8.75 -34.44 -0.30 -13.01 16 16 H 0.06 1.67 7.86 -52.49 -0.41 1.26 16 17 C 0.08 2.05 5.12 -17.82 -0.09 1.96 16 18 N -0.88 -23.88 10.96 55.43 0.61 -23.27 16 19 Si 0.89 20.59 29.57 -169.99 -5.03 15.57 16 20 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 21 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 22 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 23 C -0.19 -4.18 9.96 -26.69 -0.27 -4.45 16 24 C -0.21 -4.39 9.92 -26.69 -0.26 -4.65 16 25 C 0.07 1.04 9.76 -38.56 -0.38 0.67 16 26 C -0.24 -3.47 6.33 -105.20 -0.67 -4.13 16 27 H 0.09 0.55 8.14 -51.93 -0.42 0.12 16 28 H 0.08 0.54 8.14 -51.92 -0.42 0.11 16 29 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 30 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 31 H 0.09 0.64 8.14 -51.93 -0.42 0.22 16 32 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 33 H 0.19 3.00 7.61 -52.49 -0.40 2.60 16 34 H 0.03 0.71 7.95 -51.93 -0.41 0.30 16 35 H 0.11 2.91 6.12 -51.93 -0.32 2.59 16 36 H 0.26 6.87 8.32 -40.82 -0.34 6.53 16 37 H 0.07 1.36 8.14 -51.93 -0.42 0.94 16 38 H 0.08 1.83 8.14 -51.92 -0.42 1.41 16 39 H 0.08 1.61 8.14 -51.93 -0.42 1.19 16 40 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 41 H 0.15 1.99 7.73 -52.49 -0.41 1.58 16 LS Contribution 359.35 15.07 5.42 5.42 Total: -1.00 -31.09 359.35 -8.38 -39.47 By element: Atomic # 1 Polarization: 7.71 SS G_CDS: -5.31 Total: 2.40 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -3.43 Total: -3.33 kcal Atomic # 7 Polarization: -40.76 SS G_CDS: 0.64 Total: -40.12 kcal Atomic # 8 Polarization: -18.73 SS G_CDS: -0.68 Total: -19.41 kcal Atomic # 14 Polarization: 20.59 SS G_CDS: -5.03 Total: 15.57 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -31.09 -8.38 -39.47 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000174738776.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.426 kcal (2) G-P(sol) polarization free energy of solvation -31.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.473 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds