Wall clock time and date at job start Tue Mar 31 2020 11:12:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38026 * 119.99876 * 2 1 4 4 C 1.38206 * 120.21623 * 179.74402 * 3 2 1 5 5 C 1.38992 * 120.22827 * 0.23501 * 4 3 2 6 6 N 1.39960 * 120.00540 * 180.02562 * 5 4 3 7 7 C 1.34774 * 120.00445 * 144.79935 * 6 5 4 8 8 O 1.21590 * 119.99830 * 4.28575 * 7 6 5 9 9 N 1.34780 * 120.00070 * 184.28387 * 7 6 5 10 10 C 1.46500 * 119.99628 * 180.02562 * 9 7 6 11 11 C 1.53004 * 109.46861 * 179.97438 * 10 9 7 12 12 C 1.50700 * 109.46982 * 179.97438 * 11 10 9 13 13 H 1.08001 * 120.00359 * 0.02562 * 12 11 10 14 14 C 1.37879 * 119.99891 * 180.02562 * 12 11 10 15 15 N 1.31510 * 120.00085 * 359.97438 * 14 12 11 16 16 Si 1.86804 * 119.99939 * 180.02562 * 14 12 11 17 17 H 1.48492 * 109.46933 * 59.99642 * 16 14 12 18 18 H 1.48498 * 109.46962 * 179.97438 * 16 14 12 19 19 H 1.48499 * 109.46791 * 299.99344 * 16 14 12 20 20 C 1.38586 * 119.99781 * 0.02562 * 5 4 3 21 21 C 1.39492 * 119.78018 * 0.02562 * 20 5 4 22 22 C 1.47844 * 120.10927 * 179.97438 * 21 20 5 23 23 N 1.31212 * 125.72620 * 49.26250 * 22 21 20 24 24 C 1.34158 * 108.64717 * 179.89827 * 23 22 21 25 25 C 1.34543 * 107.83615 * 0.37042 * 24 23 22 26 26 O 1.34422 * 125.72419 * 229.58085 * 22 21 20 27 27 H 1.09007 * 109.46800 * 85.16073 * 1 2 3 28 28 H 1.08995 * 109.47426 * 205.15438 * 1 2 3 29 29 H 1.09000 * 109.47515 * 325.16588 * 1 2 3 30 30 H 1.08001 * 119.89382 * 0.02562 * 3 2 1 31 31 H 1.08004 * 119.88982 * 180.25772 * 4 3 2 32 32 H 0.97003 * 119.99978 * 324.80542 * 6 5 4 33 33 H 0.96994 * 120.00290 * 359.97438 * 9 7 6 34 34 H 1.09001 * 109.47185 * 299.99910 * 10 9 7 35 35 H 1.08998 * 109.47409 * 59.99655 * 10 9 7 36 36 H 1.08995 * 109.47063 * 299.99609 * 11 10 9 37 37 H 1.09006 * 109.47148 * 59.99983 * 11 10 9 38 38 H 0.97001 * 120.00325 * 180.02562 * 15 14 12 39 39 H 1.08001 * 120.11130 * 180.02562 * 20 5 4 40 40 H 1.07999 * 126.07826 * 180.10791 * 24 23 22 41 41 H 1.07998 * 126.36166 * 179.77568 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1954 0.0000 4 6 3.5792 1.2006 0.0053 5 6 4.2835 0.0023 0.0058 6 7 5.6830 0.0131 0.0118 7 6 6.3614 -0.9368 0.6854 8 8 5.7608 -1.8472 1.2229 9 7 7.7057 -0.8776 0.7634 10 6 8.4431 -1.9105 1.4952 11 6 9.9419 -1.6101 1.4298 12 6 10.7004 -2.6723 2.1831 13 1 10.1669 -3.4810 2.6605 14 6 12.0756 -2.6117 2.2630 15 7 12.7253 -1.6273 1.6813 16 14 13.0159 -3.9287 3.1962 17 1 12.7501 -5.2548 2.5832 18 1 14.4706 -3.6371 3.1328 19 1 12.5745 -3.9412 4.6140 20 6 3.5999 -1.2032 0.0004 21 6 2.2050 -1.2086 -0.0061 22 6 1.4683 -2.4905 -0.0125 23 7 1.6856 -3.5030 0.7933 24 6 0.8236 -4.4852 0.4900 25 6 0.0628 -4.0634 -0.5364 26 8 0.4677 -2.8165 -0.8487 27 1 -0.3633 0.0867 -1.0241 28 1 -0.3634 -0.9301 0.4368 29 1 -0.3634 0.8435 0.5870 30 1 1.6554 2.1297 0.0004 31 1 4.1138 2.1390 0.0095 32 1 6.1648 0.7043 -0.4689 33 1 8.1849 -0.1516 0.3344 34 1 8.1191 -1.9198 2.5359 35 1 8.2480 -2.8839 1.0453 36 1 10.2656 -1.6012 0.3890 37 1 10.1374 -0.6366 1.8795 38 1 13.6928 -1.5849 1.7372 39 1 4.1453 -2.1353 0.0012 40 1 0.7556 -5.4454 0.9796 41 1 -0.7259 -4.6206 -1.0202 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273265612.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:12:58 Heat of formation + Delta-G solvation = 16.848686 kcal Electronic energy + Delta-G solvation = -24670.186499 eV Core-core repulsion = 20937.768528 eV Total energy + Delta-G solvation = -3732.417971 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.41436 -40.54423 -38.89064 -35.50160 -34.89495 -34.66552 -32.93945 -32.27720 -31.64588 -29.51972 -29.23872 -26.59532 -24.66982 -24.14361 -22.76078 -22.15030 -21.33819 -20.82977 -20.51731 -18.49796 -18.04486 -16.92065 -16.78810 -16.34397 -15.79292 -15.55948 -15.22128 -14.96280 -14.63869 -14.46160 -14.16479 -13.95040 -13.78962 -13.52574 -13.32764 -13.25540 -12.58749 -12.33642 -12.27734 -11.92686 -11.54303 -11.46371 -11.21655 -11.03739 -10.66171 -10.65504 -10.43725 -10.23761 -9.91532 -9.58864 -9.56610 -9.29448 -8.70532 -8.61381 -8.40249 -8.01542 -6.09935 -4.12706 0.64727 1.19881 1.46219 2.46880 2.60759 2.82485 3.27683 3.31853 3.35388 3.39289 3.65705 3.91442 4.36114 4.51374 4.61525 4.69439 4.82226 4.83004 4.93495 5.08445 5.27298 5.27623 5.36280 5.42333 5.52536 5.62900 5.72968 5.78297 6.01124 6.08104 6.12717 6.28125 6.35386 6.36187 6.38064 6.73362 6.87765 6.88753 7.07049 7.53008 7.58344 7.60449 7.88665 8.17240 8.30422 8.79176 8.93297 9.52164 11.01679 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.018915 B = 0.002452 C = 0.002204 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1479.922594 B =11416.029545 C =12700.277393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.076 4.076 3 C -0.102 4.102 4 C -0.126 4.126 5 C 0.169 3.831 6 N -0.692 5.692 7 C 0.694 3.306 8 O -0.573 6.573 9 N -0.731 5.731 10 C 0.138 3.862 11 C 0.013 3.987 12 C -0.522 4.522 13 H 0.060 0.940 14 C 0.059 3.941 15 N -0.895 5.895 16 Si 0.898 3.102 17 H -0.275 1.275 18 H -0.287 1.287 19 H -0.275 1.275 20 C -0.070 4.070 21 C -0.007 4.007 22 C 0.241 3.759 23 N -0.461 5.461 24 C -0.040 4.040 25 C -0.082 4.082 26 O -0.196 6.196 27 H 0.074 0.926 28 H 0.060 0.940 29 H 0.071 0.929 30 H 0.133 0.867 31 H 0.132 0.868 32 H 0.407 0.593 33 H 0.395 0.605 34 H 0.057 0.943 35 H 0.057 0.943 36 H 0.022 0.978 37 H 0.023 0.977 38 H 0.263 0.737 39 H 0.153 0.847 40 H 0.186 0.814 41 H 0.216 0.784 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.041 5.631 -8.072 27.838 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.078 4.078 3 C -0.121 4.121 4 C -0.147 4.147 5 C 0.073 3.927 6 N -0.340 5.340 7 C 0.394 3.606 8 O -0.450 6.450 9 N -0.384 5.384 10 C 0.016 3.984 11 C -0.024 4.024 12 C -0.561 4.561 13 H 0.078 0.922 14 C -0.143 4.143 15 N -0.534 5.534 16 Si 0.725 3.275 17 H -0.201 1.201 18 H -0.213 1.213 19 H -0.201 1.201 20 C -0.091 4.091 21 C -0.008 4.008 22 C 0.036 3.964 23 N -0.189 5.189 24 C -0.180 4.180 25 C -0.153 4.153 26 O -0.082 6.082 27 H 0.093 0.907 28 H 0.079 0.921 29 H 0.090 0.910 30 H 0.151 0.849 31 H 0.150 0.850 32 H 0.243 0.757 33 H 0.229 0.771 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.041 0.959 37 H 0.041 0.959 38 H 0.072 0.928 39 H 0.170 0.830 40 H 0.203 0.797 41 H 0.233 0.767 Dipole moment (debyes) X Y Z Total from point charges -25.826 4.824 -7.115 27.219 hybrid contribution 0.576 -0.245 -0.414 0.750 sum -25.250 4.580 -7.529 26.743 Atomic orbital electron populations 1.20793 0.90750 1.02746 1.02598 1.19869 0.96163 0.91721 1.00060 1.20634 0.93187 0.97167 1.01110 1.21066 0.94347 0.96773 1.02514 1.17268 0.82234 0.93188 0.99973 1.42689 1.04152 1.32407 1.54761 1.16112 0.82631 0.82267 0.79573 1.90951 1.67716 1.35070 1.51274 1.45569 1.03873 1.31082 1.57846 1.21683 0.93501 0.88581 0.94643 1.19325 0.87184 0.97926 0.97967 1.21007 0.91549 1.09813 1.33695 0.92219 1.24990 0.97751 0.95930 0.95581 1.69941 1.08200 1.31378 1.43845 0.86561 0.78530 0.81946 0.80448 1.20090 1.21253 1.20069 1.21351 0.91659 0.99305 0.96791 1.16928 0.91416 0.85977 1.06528 1.23799 0.88589 0.95720 0.88292 1.70865 1.23580 0.99931 1.24512 1.23470 0.95203 1.00609 0.98697 1.25128 1.04165 0.84413 1.01605 1.84585 1.42916 1.30160 1.50555 0.90723 0.92058 0.91001 0.84884 0.85021 0.75697 0.77137 0.92451 0.92497 0.95924 0.95910 0.92783 0.82963 0.79740 0.76723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.93 9.35 36.01 0.34 -0.60 16 2 C -0.08 -0.82 5.91 -104.20 -0.62 -1.43 16 3 C -0.10 -0.93 9.70 -39.67 -0.38 -1.31 16 4 C -0.13 -1.23 9.96 -39.31 -0.39 -1.62 16 5 C 0.17 2.20 6.29 -83.74 -0.53 1.67 16 6 N -0.69 -8.83 5.34 -14.26 -0.08 -8.91 16 7 C 0.69 11.98 8.40 -86.92 -0.73 11.25 16 8 O -0.57 -12.22 13.79 5.29 0.07 -12.15 16 9 N -0.73 -12.53 5.56 -65.22 -0.36 -12.89 16 10 C 0.14 2.94 5.61 -4.04 -0.02 2.91 16 11 C 0.01 0.33 5.09 -27.88 -0.14 0.19 16 12 C -0.52 -14.46 9.11 -34.44 -0.31 -14.77 16 13 H 0.06 1.62 7.74 -52.49 -0.41 1.22 16 14 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 15 N -0.89 -26.04 13.29 55.43 0.74 -25.30 16 16 Si 0.90 21.43 29.54 -169.99 -5.02 16.41 16 17 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 18 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 19 H -0.28 -6.49 7.11 56.52 0.40 -6.08 16 20 C -0.07 -1.05 8.43 -38.99 -0.33 -1.38 16 21 C -0.01 -0.09 5.87 -105.00 -0.62 -0.71 16 22 C 0.24 3.36 6.46 -13.89 -0.09 3.27 16 23 N -0.46 -7.05 11.32 -11.72 -0.13 -7.18 16 24 C -0.04 -0.44 11.87 -17.84 -0.21 -0.65 16 25 C -0.08 -0.74 12.17 29.43 0.36 -0.38 16 26 O -0.20 -2.28 9.78 4.09 0.04 -2.24 16 27 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 28 H 0.06 0.58 6.50 -51.93 -0.34 0.24 16 29 H 0.07 0.46 8.12 -51.93 -0.42 0.04 16 30 H 0.13 0.80 8.06 -52.49 -0.42 0.38 16 31 H 0.13 0.93 8.06 -52.48 -0.42 0.51 16 32 H 0.41 3.66 8.84 -40.82 -0.36 3.30 16 33 H 0.40 5.65 8.49 -40.82 -0.35 5.31 16 34 H 0.06 1.28 8.14 -51.93 -0.42 0.85 16 35 H 0.06 1.26 8.14 -51.93 -0.42 0.84 16 36 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 37 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 38 H 0.26 7.24 8.31 -40.82 -0.34 6.90 16 39 H 0.15 2.75 6.23 -52.49 -0.33 2.42 16 40 H 0.19 1.47 8.06 -52.49 -0.42 1.05 16 41 H 0.22 0.87 8.06 -52.49 -0.42 0.45 16 LS Contribution 356.79 15.07 5.38 5.38 Total: -1.00 -35.20 356.79 -8.28 -43.48 By element: Atomic # 1 Polarization: 10.54 SS G_CDS: -5.14 Total: 5.40 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -3.78 Total: -2.00 kcal Atomic # 7 Polarization: -54.44 SS G_CDS: 0.16 Total: -54.28 kcal Atomic # 8 Polarization: -14.50 SS G_CDS: 0.11 Total: -14.39 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.02 Total: 16.41 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -35.20 -8.28 -43.48 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273265612.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.330 kcal (2) G-P(sol) polarization free energy of solvation -35.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.481 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds