Wall clock time and date at job start Tue Mar 31 2020 11:06:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30996 * 1 3 3 C 1.50695 * 120.00327 * 2 1 4 4 N 1.46494 * 109.47625 * 124.99678 * 3 2 1 5 5 C 1.46501 * 120.00325 * 264.63408 * 4 3 2 6 6 C 1.50702 * 109.46838 * 269.99593 * 5 4 3 7 7 H 1.08000 * 120.00021 * 0.02562 * 6 5 4 8 8 C 1.37881 * 120.00025 * 179.97438 * 6 5 4 9 9 N 1.31518 * 119.99682 * 0.02562 * 8 6 5 10 10 Si 1.86798 * 120.00217 * 180.02562 * 8 6 5 11 11 H 1.48496 * 109.47003 * 90.00353 * 10 8 6 12 12 H 1.48500 * 109.47246 * 210.00622 * 10 8 6 13 13 H 1.48498 * 109.46974 * 330.00189 * 10 8 6 14 14 C 1.34783 * 119.99991 * 84.62558 * 4 3 2 15 15 O 1.21531 * 119.99713 * 185.65150 * 14 4 3 16 16 C 1.47998 * 119.99693 * 5.65922 * 14 4 3 17 17 C 1.39482 * 121.11009 * 57.03535 * 16 14 4 18 18 C 1.38542 * 119.20770 * 180.23474 * 17 16 14 19 19 C 1.50700 * 119.17609 * 179.73041 * 18 17 16 20 20 N 1.31592 * 121.65658 * 359.45767 * 18 17 16 21 21 C 1.32419 * 122.02635 * 0.27484 * 20 18 17 22 22 O 1.34840 * 133.10561 * 180.02562 * 21 20 18 23 23 N 1.41323 * 109.42391 * 179.97438 * 22 21 20 24 24 C 1.29811 * 109.73962 * 359.97438 * 23 22 21 25 25 C 1.50693 * 126.33743 * 179.97438 * 24 23 22 26 26 C 1.40559 * 120.04161 * 359.97438 * 21 20 18 27 27 H 1.08002 * 120.00183 * 180.02562 * 1 2 3 28 28 H 1.08003 * 119.99980 * 0.02562 * 1 2 3 29 29 H 1.08003 * 119.99980 * 179.97438 * 2 1 3 30 30 H 1.09010 * 109.46924 * 4.99540 * 3 2 1 31 31 H 1.08998 * 109.47268 * 244.99967 * 3 2 1 32 32 H 1.08997 * 109.47177 * 29.99287 * 5 4 3 33 33 H 1.08993 * 109.47412 * 149.99517 * 5 4 3 34 34 H 0.97003 * 119.99679 * 179.97438 * 9 8 6 35 35 H 1.08005 * 120.39758 * 359.97438 * 17 16 14 36 36 H 1.08996 * 109.47160 * 269.73877 * 19 18 17 37 37 H 1.09000 * 109.46794 * 29.73052 * 19 18 17 38 38 H 1.08997 * 109.47080 * 149.73053 * 19 18 17 39 39 H 1.09005 * 109.46910 * 264.01234 * 25 24 23 40 40 H 1.09001 * 109.47483 * 24.01346 * 25 24 23 41 41 H 1.09004 * 109.47076 * 144.01410 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3050 0.0000 4 7 2.9937 1.3319 1.1314 5 6 2.5991 1.9710 2.3892 6 6 2.9908 3.4259 2.3579 7 1 3.4839 3.8337 1.4879 8 6 2.7187 4.2365 3.4395 9 7 2.1177 3.7399 4.4987 10 14 3.2035 6.0401 3.4005 11 1 2.0876 6.8405 2.8354 12 1 3.4962 6.5039 4.7804 13 1 4.4122 6.2095 2.5546 14 6 4.2126 0.7685 1.0152 15 8 4.9448 0.6994 1.9828 16 6 4.6594 0.2343 -0.2907 17 6 4.7024 1.0455 -1.4246 18 6 5.1225 0.5032 -2.6282 19 6 5.1628 1.3786 -3.8542 20 7 5.4922 -0.7559 -2.7268 21 6 5.4790 -1.5752 -1.6866 22 8 5.8026 -2.8752 -1.5335 23 7 5.5984 -3.2549 -0.1876 24 6 5.1624 -2.2393 0.4932 25 6 4.8219 -2.2282 1.9611 26 6 5.0617 -1.1082 -0.4283 27 1 -0.5400 -0.9353 0.0004 28 1 -0.5400 0.9353 -0.0004 29 1 1.8500 -0.9353 0.0004 30 1 1.3585 2.1316 0.0895 31 1 2.6213 1.4025 -0.9314 32 1 1.5197 1.8880 2.5159 33 1 3.1015 1.4773 3.2209 34 1 1.9265 4.3101 5.2598 35 1 4.4077 2.0829 -1.3659 36 1 4.2053 1.3231 -4.3719 37 1 5.3564 2.4096 -3.5581 38 1 5.9558 1.0365 -4.5191 39 1 3.7508 -2.3868 2.0868 40 1 5.3688 -3.0238 2.4671 41 1 5.0996 -1.2659 2.3912 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292597685.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:06:56 Heat of formation + Delta-G solvation = 70.533906 kcal Electronic energy + Delta-G solvation = -26616.935924 eV Core-core repulsion = 22886.845918 eV Total energy + Delta-G solvation = -3730.090005 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.14193 -39.76027 -38.65935 -35.99110 -34.80831 -33.39428 -32.69642 -32.27663 -31.94887 -28.79074 -28.03322 -27.53977 -25.95421 -24.54531 -23.35175 -22.34194 -20.85953 -20.11415 -18.77878 -18.19442 -17.49117 -16.89965 -16.58071 -16.52252 -15.79485 -15.11962 -14.82625 -14.44694 -14.29226 -14.21800 -14.01276 -13.51838 -13.46247 -13.22761 -12.90283 -12.87048 -12.71531 -12.41626 -12.32296 -12.17812 -11.85935 -11.50072 -11.40531 -11.22063 -11.02979 -10.90688 -10.73762 -10.36101 -10.10890 -9.80151 -9.60587 -9.37624 -9.22644 -8.95901 -8.56544 -7.96709 -6.18291 -4.24410 0.17721 0.80334 1.83843 2.00537 2.28914 2.90606 3.21351 3.29237 3.31422 3.34451 3.47603 3.69336 3.97834 4.29284 4.32692 4.39367 4.55892 4.85614 5.01499 5.04784 5.13982 5.17328 5.25383 5.33710 5.39069 5.46629 5.47076 5.57903 5.61271 5.67960 5.78063 5.87134 6.00900 6.08964 6.24080 6.65738 6.72387 6.85705 6.97959 7.20973 7.29819 7.49239 7.76215 8.02978 8.05129 8.54857 8.80544 9.41360 10.89754 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.013868 B = 0.004501 C = 0.004241 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2018.509772 B = 6218.969369 C = 6601.344856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.171 4.171 3 C 0.125 3.875 4 N -0.575 5.575 5 C 0.246 3.754 6 C -0.534 4.534 7 H 0.059 0.941 8 C 0.065 3.935 9 N -0.891 5.891 10 Si 0.899 3.101 11 H -0.279 1.279 12 H -0.284 1.284 13 H -0.273 1.273 14 C 0.547 3.453 15 O -0.517 6.517 16 C 0.026 3.974 17 C -0.181 4.181 18 C 0.202 3.798 19 C -0.107 4.107 20 N -0.479 5.479 21 C 0.297 3.703 22 O -0.086 6.086 23 N -0.284 5.284 24 C 0.162 3.838 25 C -0.109 4.109 26 C -0.224 4.224 27 H 0.095 0.905 28 H 0.101 0.899 29 H 0.100 0.900 30 H 0.096 0.904 31 H 0.079 0.921 32 H 0.038 0.962 33 H 0.049 0.951 34 H 0.265 0.735 35 H 0.158 0.842 36 H 0.090 0.910 37 H 0.087 0.913 38 H 0.085 0.915 39 H 0.094 0.906 40 H 0.086 0.914 41 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.072 -6.203 -12.833 14.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.191 4.191 3 C 0.002 3.998 4 N -0.304 5.304 5 C 0.127 3.873 6 C -0.572 4.572 7 H 0.077 0.923 8 C -0.138 4.138 9 N -0.529 5.529 10 Si 0.726 3.274 11 H -0.205 1.205 12 H -0.210 1.210 13 H -0.198 1.198 14 C 0.332 3.668 15 O -0.394 6.394 16 C 0.013 3.987 17 C -0.202 4.202 18 C 0.059 3.941 19 C -0.164 4.164 20 N -0.201 5.201 21 C 0.114 3.886 22 O -0.089 6.089 23 N -0.032 5.032 24 C -0.018 4.018 25 C -0.166 4.166 26 C -0.230 4.230 27 H 0.114 0.886 28 H 0.120 0.880 29 H 0.118 0.882 30 H 0.114 0.886 31 H 0.097 0.903 32 H 0.056 0.944 33 H 0.067 0.933 34 H 0.075 0.925 35 H 0.176 0.824 36 H 0.108 0.892 37 H 0.106 0.894 38 H 0.103 0.897 39 H 0.112 0.888 40 H 0.105 0.895 41 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.039 -7.872 -12.928 15.172 hybrid contribution -0.273 1.921 0.779 2.091 sum 0.766 -5.951 -12.149 13.550 Atomic orbital electron populations 1.23835 0.95671 1.01957 0.99871 1.23342 0.96486 0.98694 1.00544 1.20847 0.93192 0.95835 0.89949 1.48236 1.12316 1.53730 1.16155 1.19439 0.96236 0.92299 0.79284 1.21375 1.39730 0.93841 1.02279 0.92292 1.24918 0.94862 0.98990 0.95061 1.69926 1.41171 1.36232 1.05585 0.86488 0.78892 0.84486 0.77531 1.20534 1.21013 1.19827 1.17936 0.83080 0.79266 0.86555 1.90727 1.53803 1.57025 1.37856 1.20284 0.91963 0.91044 0.95406 1.22106 1.04491 1.02142 0.91461 1.21313 0.89174 0.88256 0.95312 1.20866 1.04335 0.97642 0.93544 1.66322 1.20100 1.03725 1.29960 1.20275 0.92055 0.86818 0.89498 1.89220 1.75131 1.19538 1.25050 1.80066 1.20440 1.17565 0.85165 1.24551 0.90382 0.88856 0.98039 1.20923 1.03353 1.07369 0.84942 1.21197 1.12037 0.95688 0.94124 0.88642 0.88031 0.88236 0.88592 0.90289 0.94423 0.93342 0.92529 0.82417 0.89201 0.89440 0.89655 0.88778 0.89473 0.86025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.12 14.32 29.02 0.42 -1.70 16 2 C -0.17 -2.34 9.80 -36.03 -0.35 -2.69 16 3 C 0.13 1.86 5.63 -5.20 -0.03 1.84 16 4 N -0.57 -10.94 2.45 -177.50 -0.44 -11.38 16 5 C 0.25 5.83 5.18 -5.19 -0.03 5.80 16 6 C -0.53 -13.85 9.39 -34.44 -0.32 -14.17 16 7 H 0.06 1.51 7.81 -52.49 -0.41 1.10 16 8 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 9 N -0.89 -24.90 13.29 55.43 0.74 -24.16 16 10 Si 0.90 20.51 29.54 -169.99 -5.02 15.49 16 11 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 12 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 13 H -0.27 -6.21 7.11 56.52 0.40 -5.81 16 14 C 0.55 10.46 6.55 -12.26 -0.08 10.38 16 15 O -0.52 -11.58 13.96 5.34 0.07 -11.50 16 16 C 0.03 0.42 4.94 -104.46 -0.52 -0.09 16 17 C -0.18 -2.39 7.39 -39.01 -0.29 -2.68 16 18 C 0.20 2.44 6.77 -82.58 -0.56 1.88 16 19 C -0.11 -0.82 10.15 36.01 0.37 -0.45 16 20 N -0.48 -7.04 10.25 -9.24 -0.09 -7.13 16 21 C 0.30 4.81 8.64 -16.42 -0.14 4.67 16 22 O -0.09 -1.46 12.06 7.64 0.09 -1.37 16 23 N -0.28 -4.60 12.81 34.84 0.45 -4.16 16 24 C 0.16 2.54 7.46 -80.23 -0.60 1.94 16 25 C -0.11 -1.49 9.93 36.00 0.36 -1.13 16 26 C -0.22 -3.64 6.20 -104.83 -0.65 -4.29 16 27 H 0.10 1.01 8.06 -52.49 -0.42 0.58 16 28 H 0.10 1.16 7.84 -52.48 -0.41 0.75 16 29 H 0.10 1.38 8.06 -52.48 -0.42 0.96 16 30 H 0.10 1.43 7.68 -51.92 -0.40 1.04 16 31 H 0.08 1.01 4.78 -51.93 -0.25 0.76 16 32 H 0.04 0.91 8.07 -51.93 -0.42 0.50 16 33 H 0.05 1.30 7.35 -51.93 -0.38 0.91 16 34 H 0.27 7.03 8.31 -40.82 -0.34 6.69 16 35 H 0.16 1.80 7.54 -52.48 -0.40 1.41 16 36 H 0.09 0.55 8.14 -51.93 -0.42 0.13 16 37 H 0.09 0.53 8.07 -51.93 -0.42 0.11 16 38 H 0.08 0.63 8.14 -51.93 -0.42 0.21 16 39 H 0.09 1.16 8.14 -51.93 -0.42 0.74 16 40 H 0.09 1.00 8.14 -51.93 -0.42 0.58 16 41 H 0.12 1.98 5.12 -51.93 -0.27 1.71 16 LS Contribution 354.74 15.07 5.35 5.35 Total: -1.00 -31.08 354.74 -6.40 -37.48 By element: Atomic # 1 Polarization: 5.47 SS G_CDS: -5.02 Total: 0.45 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: -2.53 Total: 0.93 kcal Atomic # 7 Polarization: -47.48 SS G_CDS: 0.65 Total: -46.83 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: 0.17 Total: -12.87 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.02 Total: 15.49 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -31.08 -6.40 -37.48 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292597685.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.017 kcal (2) G-P(sol) polarization free energy of solvation -31.080 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.937 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.483 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds