Wall clock time and date at job start Tue Mar 31 2020 11:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38852 * 125.50452 * 2 1 4 4 C 1.38691 * 107.67593 * 179.97438 * 3 2 1 5 5 N 1.34170 * 132.23935 * 180.02562 * 4 3 2 6 6 C 1.30889 * 121.17483 * 179.97438 * 5 4 3 7 7 C 1.41594 * 120.06591 * 359.97438 * 6 5 4 8 8 C 1.47464 * 120.50845 * 179.97438 * 7 6 5 9 9 O 1.21511 * 119.99428 * 172.77044 * 8 7 6 10 10 O 1.34742 * 119.99952 * 352.77110 * 8 7 6 11 11 C 1.45208 * 116.99642 * 185.05328 * 10 8 7 12 12 C 1.52999 * 109.47071 * 175.12856 * 11 10 8 13 13 C 1.50697 * 115.54947 * 185.90686 * 12 11 10 14 14 H 1.08003 * 119.99392 * 145.73355 * 13 12 11 15 15 C 1.37869 * 120.00388 * 325.73604 * 13 12 11 16 16 N 1.31516 * 120.00214 * 166.74861 * 15 13 12 17 17 Si 1.86808 * 119.99809 * 346.75086 * 15 13 12 18 18 H 1.48498 * 109.47191 * 95.54146 * 17 15 13 19 19 H 1.48504 * 109.46805 * 215.54299 * 17 15 13 20 20 H 1.48494 * 109.47079 * 335.54056 * 17 15 13 21 21 C 1.53004 * 117.49564 * 40.23866 * 12 11 10 22 22 C 1.53005 * 117.49727 * 331.58405 * 12 11 10 23 23 C 1.38139 * 118.97852 * 0.02562 * 7 6 5 24 24 C 1.50704 * 120.55726 * 180.02562 * 23 7 6 25 25 N 1.36047 * 118.88826 * 0.02562 * 23 7 6 26 26 N 1.31285 * 125.50584 * 179.69627 * 2 1 3 27 27 H 1.09006 * 109.47444 * 89.99730 * 1 2 3 28 28 H 1.09001 * 109.47518 * 209.99692 * 1 2 3 29 29 H 1.09008 * 109.47303 * 329.99869 * 1 2 3 30 30 H 1.08004 * 126.16215 * 359.97438 * 3 2 1 31 31 H 1.07998 * 119.96713 * 180.02562 * 6 5 4 32 32 H 1.09000 * 109.46549 * 295.13140 * 11 10 8 33 33 H 1.09001 * 109.46932 * 55.12739 * 11 10 8 34 34 H 0.97003 * 119.99640 * 180.02562 * 16 15 13 35 35 H 1.09001 * 117.50170 * 359.97438 * 21 12 11 36 36 H 1.08999 * 117.49595 * 145.01999 * 21 12 11 37 37 H 1.09004 * 117.49223 * 214.97870 * 22 12 11 38 38 H 1.09002 * 117.49983 * 359.97070 * 22 12 11 39 39 H 1.09007 * 109.46522 * 83.00502 * 24 23 7 40 40 H 1.09000 * 109.47350 * 203.00345 * 24 23 7 41 41 H 1.08989 * 109.46969 * 323.01031 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3134 1.1304 0.0000 4 6 3.6337 0.7057 0.0006 5 7 4.7964 1.3752 0.0013 6 6 5.9424 0.7428 0.0023 7 6 5.9714 -0.6729 0.0031 8 6 7.2569 -1.3953 0.0037 9 8 7.2750 -2.6030 0.1369 10 8 8.4114 -0.7163 -0.1435 11 6 9.6289 -1.5008 -0.2468 12 6 10.8116 -0.5721 -0.5289 13 6 12.1260 -1.2575 -0.8001 14 1 12.8242 -0.8276 -1.5030 15 6 12.4372 -2.4333 -0.1509 16 7 13.4468 -3.1665 -0.5664 17 14 11.4246 -2.9851 1.3188 18 1 10.3779 -3.9377 0.8692 19 1 12.3096 -3.6522 2.3072 20 1 10.7814 -1.8039 1.9482 21 6 10.8521 0.7654 0.2131 22 6 10.5245 0.7287 -1.2817 23 6 4.7769 -1.3667 0.0024 24 6 4.7662 -2.8737 0.0039 25 7 3.6102 -0.6668 0.0003 26 7 2.2694 -1.0687 0.0057 27 1 -0.3634 0.0000 -1.0277 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3634 0.8900 0.5139 30 1 1.9736 2.1556 -0.0004 31 1 6.8667 1.3013 0.0032 32 1 9.7993 -2.0320 0.6897 33 1 9.5298 -2.2201 -1.0597 34 1 13.6655 -3.9940 -0.1098 35 1 10.0360 0.9839 0.9019 36 1 11.8296 1.1497 0.5047 37 1 11.2865 1.0887 -1.9729 38 1 9.4931 0.9225 -1.5764 39 1 4.8876 -3.2368 1.0245 40 1 3.8182 -3.2308 -0.3985 41 1 5.5851 -3.2434 -0.6130 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000744276844.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:45 Heat of formation + Delta-G solvation = 71.936931 kcal Electronic energy + Delta-G solvation = -25825.509401 eV Core-core repulsion = 22095.480236 eV Total energy + Delta-G solvation = -3730.029166 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.71865 -40.40231 -38.41847 -37.31331 -35.72918 -34.97407 -32.76310 -32.35298 -30.09468 -29.25626 -28.63128 -27.70122 -25.40496 -24.16170 -23.17948 -21.61502 -21.44031 -20.38069 -19.27378 -18.85492 -17.75388 -17.03953 -16.93268 -16.76972 -16.09173 -16.05516 -15.24815 -14.77184 -14.19000 -14.11882 -14.06097 -13.56249 -13.48924 -13.42325 -13.30412 -12.97755 -12.94662 -12.72321 -12.67835 -12.44374 -11.90115 -11.50093 -11.25384 -11.00422 -10.90722 -10.61402 -10.50987 -10.45427 -10.05060 -9.87353 -9.73408 -9.58916 -9.34056 -8.79686 -8.41839 -8.24724 -6.32832 -4.26432 0.00401 0.34972 1.46640 2.02254 2.49098 2.77403 3.16120 3.19633 3.24642 3.28866 3.51343 3.65578 3.87604 4.20217 4.37284 4.55338 4.64306 4.70554 4.91449 5.05934 5.14662 5.18175 5.22997 5.25763 5.28359 5.32287 5.55774 5.58692 5.71134 5.74712 5.78772 5.86581 6.01388 6.11387 6.20106 6.43469 6.52083 6.59434 6.78670 6.91975 7.05010 7.16056 7.30016 7.52781 7.79735 8.32568 8.72991 9.29395 10.79139 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.026768 B = 0.003308 C = 0.003039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1045.776685 B = 8463.535575 C = 9211.193737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.122 3.878 3 C -0.262 4.262 4 C 0.268 3.732 5 N -0.475 5.475 6 C 0.234 3.766 7 C -0.240 4.240 8 C 0.522 3.478 9 O -0.502 6.502 10 O -0.342 6.342 11 C 0.088 3.912 12 C 0.004 3.996 13 C -0.484 4.484 14 H 0.087 0.913 15 C 0.078 3.922 16 N -0.880 5.880 17 Si 0.869 3.131 18 H -0.272 1.272 19 H -0.289 1.289 20 H -0.258 1.258 21 C -0.200 4.200 22 C -0.179 4.179 23 C 0.278 3.722 24 C -0.129 4.129 25 N -0.319 5.319 26 N -0.307 5.307 27 H 0.086 0.914 28 H 0.079 0.921 29 H 0.086 0.914 30 H 0.166 0.834 31 H 0.196 0.804 32 H 0.069 0.931 33 H 0.080 0.920 34 H 0.269 0.731 35 H 0.072 0.928 36 H 0.085 0.915 37 H 0.082 0.918 38 H 0.079 0.921 39 H 0.105 0.895 40 H 0.085 0.915 41 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.882 5.903 1.759 23.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.038 4.038 3 C -0.292 4.292 4 C 0.044 3.956 5 N -0.186 5.186 6 C 0.049 3.951 7 C -0.249 4.249 8 C 0.365 3.635 9 O -0.392 6.392 10 O -0.258 6.258 11 C 0.017 3.983 12 C 0.003 3.997 13 C -0.520 4.520 14 H 0.105 0.895 15 C -0.126 4.126 16 N -0.516 5.516 17 Si 0.699 3.301 18 H -0.198 1.198 19 H -0.217 1.217 20 H -0.184 1.184 21 C -0.237 4.237 22 C -0.216 4.216 23 C 0.160 3.840 24 C -0.186 4.186 25 N -0.089 5.089 26 N -0.132 5.132 27 H 0.104 0.896 28 H 0.098 0.902 29 H 0.105 0.895 30 H 0.183 0.817 31 H 0.213 0.787 32 H 0.086 0.914 33 H 0.098 0.902 34 H 0.079 0.921 35 H 0.091 0.909 36 H 0.103 0.897 37 H 0.101 0.899 38 H 0.098 0.902 39 H 0.124 0.876 40 H 0.104 0.896 41 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -23.058 5.008 1.824 23.666 hybrid contribution -0.188 -0.391 0.842 0.947 sum -23.247 4.617 2.665 23.850 Atomic orbital electron populations 1.20326 0.85173 1.04121 1.03801 1.22439 0.97522 0.90053 0.93804 1.20927 0.87392 1.00447 1.20437 1.20952 0.95226 0.80013 0.99370 1.68250 0.95926 1.36181 1.18283 1.23775 0.96691 0.89942 0.84669 1.19575 0.90792 0.95279 1.19221 1.20013 0.84197 0.85384 0.73904 1.90827 1.87732 1.14811 1.45822 1.86475 1.15374 1.41817 1.82095 1.23701 0.78565 0.94102 1.01954 1.19374 0.92673 0.86462 1.01162 1.20284 0.98595 1.07143 1.26000 0.89548 1.25009 0.95264 0.95687 0.96690 1.69903 1.29057 1.13362 1.39253 0.87209 0.79611 0.79254 0.84000 1.19818 1.21656 1.18361 1.23132 1.01027 1.05909 0.93683 1.22762 1.00271 1.03982 0.94575 1.21096 0.81235 0.96451 0.85261 1.21439 1.05853 0.85123 1.06139 1.47029 1.05928 1.07308 1.48621 1.77835 0.82189 1.21404 1.31744 0.89561 0.90222 0.89537 0.81692 0.78680 0.91381 0.90193 0.92072 0.90902 0.89653 0.89912 0.90238 0.87648 0.89595 0.85981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.44 10.43 36.00 0.38 -0.06 16 2 C 0.12 1.28 7.16 -82.60 -0.59 0.69 16 3 C -0.26 -2.95 10.83 -39.19 -0.42 -3.38 16 4 C 0.27 3.66 7.91 -155.31 -1.23 2.43 16 5 N -0.48 -6.44 10.45 -11.90 -0.12 -6.56 16 6 C 0.23 2.97 10.86 -16.67 -0.18 2.78 16 7 C -0.24 -3.32 5.88 -104.90 -0.62 -3.94 16 8 C 0.52 8.54 7.81 34.49 0.27 8.81 16 9 O -0.50 -9.09 13.22 -19.27 -0.25 -9.34 16 10 O -0.34 -6.09 7.83 -40.60 -0.32 -6.41 16 11 C 0.09 1.89 4.10 37.16 0.15 2.04 16 12 C 0.00 0.10 1.88 -155.66 -0.29 -0.19 16 13 C -0.48 -12.93 9.58 -34.44 -0.33 -13.26 16 14 H 0.09 2.49 8.06 -52.48 -0.42 2.06 16 15 C 0.08 2.14 5.42 -17.82 -0.10 2.05 16 16 N -0.88 -25.59 13.96 55.43 0.77 -24.81 16 17 Si 0.87 20.92 24.18 -169.99 -4.11 16.81 16 18 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 19 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 20 H -0.26 -5.96 6.39 56.52 0.36 -5.60 16 21 C -0.20 -3.99 9.67 -26.69 -0.26 -4.25 16 22 C -0.18 -3.46 9.63 -26.69 -0.26 -3.71 16 23 C 0.28 3.73 6.93 -80.76 -0.56 3.17 16 24 C -0.13 -1.51 8.80 36.01 0.32 -1.20 16 25 N -0.32 -4.38 3.88 -7.97 -0.03 -4.41 16 26 N -0.31 -3.96 12.36 33.54 0.41 -3.54 16 27 H 0.09 0.40 8.14 -51.93 -0.42 -0.03 16 28 H 0.08 0.43 8.14 -51.93 -0.42 0.01 16 29 H 0.09 0.34 8.14 -51.92 -0.42 -0.09 16 30 H 0.17 1.46 8.06 -52.48 -0.42 1.03 16 31 H 0.20 2.07 7.69 -52.49 -0.40 1.66 16 32 H 0.07 1.55 2.63 -51.93 -0.14 1.41 16 33 H 0.08 1.74 8.10 -51.93 -0.42 1.31 16 34 H 0.27 7.32 8.31 -40.82 -0.34 6.98 16 35 H 0.07 1.33 7.85 -51.93 -0.41 0.92 16 36 H 0.08 1.72 8.14 -51.93 -0.42 1.30 16 37 H 0.08 1.59 8.14 -51.93 -0.42 1.17 16 38 H 0.08 1.37 7.47 -51.93 -0.39 0.98 16 39 H 0.11 1.17 8.14 -51.93 -0.42 0.75 16 40 H 0.09 0.91 7.96 -51.93 -0.41 0.50 16 41 H 0.12 1.54 5.96 -51.94 -0.31 1.23 16 LS Contribution 344.31 15.07 5.19 5.19 Total: -1.00 -30.92 344.31 -7.22 -38.14 By element: Atomic # 1 Polarization: 7.99 SS G_CDS: -5.04 Total: 2.96 kcal Atomic # 6 Polarization: -4.30 SS G_CDS: -3.72 Total: -8.02 kcal Atomic # 7 Polarization: -40.36 SS G_CDS: 1.03 Total: -39.33 kcal Atomic # 8 Polarization: -15.18 SS G_CDS: -0.57 Total: -15.75 kcal Atomic # 14 Polarization: 20.92 SS G_CDS: -4.11 Total: 16.81 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -30.92 -7.22 -38.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000744276844.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.079 kcal (2) G-P(sol) polarization free energy of solvation -30.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.142 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.937 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds