Wall clock time and date at job start Tue Mar 31 2020 12:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53005 * 109.47232 * 2 1 4 4 N 1.46496 * 109.47291 * 120.00292 * 2 1 3 5 5 C 1.46500 * 119.99670 * 305.06186 * 4 2 1 6 6 C 1.50698 * 109.47091 * 269.99233 * 5 4 2 7 7 N 1.32420 * 118.52390 * 90.00133 * 6 5 4 8 8 C 1.32394 * 121.52398 * 180.02562 * 7 6 5 9 9 O 1.35271 * 120.89576 * 179.97438 * 8 7 6 10 10 C 1.41424 * 118.21508 * 359.97438 * 8 7 6 11 11 C 1.40006 * 122.12958 * 180.02562 * 10 8 7 12 12 C 1.36341 * 119.50201 * 179.97438 * 11 10 8 13 13 C 1.39251 * 120.90631 * 0.02562 * 12 11 10 14 14 C 1.36283 * 121.04162 * 359.97438 * 13 12 11 15 15 C 1.40174 * 119.58530 * 0.02562 * 14 13 12 16 16 N 1.31148 * 118.53104 * 270.00589 * 6 5 4 17 17 C 1.34778 * 120.00265 * 125.05290 * 4 2 1 18 18 O 1.21687 * 119.99604 * 354.89294 * 17 4 2 19 19 C 1.46375 * 120.00134 * 174.88078 * 17 4 2 20 20 H 1.07997 * 119.99783 * 5.05579 * 19 17 4 21 21 C 1.40042 * 120.00033 * 185.05088 * 19 17 4 22 22 N 1.30668 * 120.00230 * 0.02562 * 21 19 17 23 23 Si 1.86802 * 120.00071 * 180.02562 * 21 19 17 24 24 H 1.48505 * 109.47058 * 59.99772 * 23 21 19 25 25 H 1.48500 * 109.47260 * 179.97438 * 23 21 19 26 26 H 1.48498 * 109.46961 * 299.99870 * 23 21 19 27 27 H 1.08999 * 109.46742 * 300.00135 * 1 2 3 28 28 H 1.09005 * 109.47122 * 59.99665 * 1 2 3 29 29 H 1.08999 * 109.47530 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.47268 * 240.00353 * 2 1 3 31 31 H 1.08995 * 109.46833 * 179.97438 * 3 2 1 32 32 H 1.08997 * 109.47248 * 299.99911 * 3 2 1 33 33 H 1.09002 * 109.46500 * 60.00506 * 3 2 1 34 34 H 1.09006 * 109.46783 * 149.99888 * 5 4 2 35 35 H 1.08997 * 109.47584 * 29.99951 * 5 4 2 36 36 H 0.96707 * 114.00360 * 89.99718 * 9 8 7 37 37 H 1.08008 * 120.25090 * 0.02562 * 11 10 8 38 38 H 1.08001 * 119.55121 * 179.97438 * 12 11 10 39 39 H 1.08001 * 119.47898 * 180.02562 * 13 12 11 40 40 H 1.07997 * 120.21126 * 179.97438 * 14 13 12 41 41 H 0.97005 * 120.00642 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 1.5754 -0.2581 2.5238 6 6 2.5200 0.7908 3.0515 7 7 2.2656 2.0627 2.7849 8 6 3.0559 3.0324 3.2184 9 8 2.7841 4.3275 2.9380 10 6 4.1919 2.6778 3.9825 11 6 5.0819 3.6362 4.4821 12 6 6.1603 3.2344 5.2132 13 6 6.3883 1.8848 5.4690 14 6 5.5412 0.9271 4.9971 15 6 4.4223 1.3043 4.2417 16 7 3.5573 0.4031 3.7542 17 6 2.8750 -1.7241 1.0750 18 8 3.1705 -2.1433 -0.0285 19 6 3.4502 -2.3419 2.2709 20 1 3.1267 -2.0248 3.2512 21 6 4.4198 -3.3443 2.1437 22 7 4.8116 -3.7277 0.9576 23 14 5.1533 -4.1333 3.6698 24 1 4.0742 -4.7764 4.4619 25 1 6.1492 -5.1586 3.2670 26 1 5.8191 -3.0926 4.4937 27 1 -0.3633 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 1.8934 -0.5138 -0.8900 31 1 3.1300 1.4425 0.0005 32 1 1.6768 1.9564 -0.8900 33 1 1.6767 1.9563 0.8901 34 1 1.5669 -1.1128 3.2003 35 1 0.5711 0.1597 2.4536 36 1 2.2260 4.7638 3.5963 37 1 4.9151 4.6860 4.2904 38 1 6.8475 3.9730 5.5987 39 1 7.2496 1.5923 6.0513 40 1 5.7311 -0.1158 5.2032 41 1 5.4829 -4.4223 0.8694 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355661137.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:55 Heat of formation + Delta-G solvation = 5.931750 kcal Electronic energy + Delta-G solvation = -27010.356628 eV Core-core repulsion = 23277.465263 eV Total energy + Delta-G solvation = -3732.891365 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.30455 -38.41808 -37.99277 -37.12844 -34.76591 -33.03631 -32.41883 -31.87954 -31.14712 -29.74133 -26.71474 -26.48827 -26.01381 -24.39499 -22.79962 -22.14955 -21.08803 -19.07272 -18.62292 -18.22574 -17.66149 -16.65524 -16.00350 -15.59484 -15.12457 -14.94167 -14.73562 -14.34645 -14.12645 -13.99339 -13.72268 -13.20161 -12.82135 -12.55458 -12.37564 -12.20871 -12.19200 -11.70218 -11.67848 -11.63434 -11.44175 -11.17339 -10.93258 -10.89184 -10.58290 -10.52915 -10.39109 -10.22667 -10.05586 -9.87778 -9.14359 -8.85442 -8.75023 -8.21036 -7.50135 -7.32817 -6.10087 -4.49724 0.30271 0.80418 1.89974 2.99700 3.21243 3.25620 3.28344 3.32670 4.02418 4.20715 4.28763 4.44200 4.62354 4.63922 4.71668 4.81401 4.97174 5.20525 5.37839 5.48349 5.62444 5.73399 5.78542 5.85177 5.97945 6.03019 6.08773 6.11343 6.21103 6.30419 6.34479 6.35728 6.41381 6.51942 6.62175 6.70656 6.89522 7.03967 7.22320 7.33530 7.59067 7.66247 8.24474 8.43453 8.51856 9.14997 9.45931 10.65087 10.84170 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.010447 B = 0.006890 C = 0.004494 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2679.539847 B = 4063.010250 C = 6228.683422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.137 3.863 3 C -0.172 4.172 4 N -0.627 5.627 5 C 0.192 3.808 6 C 0.339 3.661 7 N -0.525 5.525 8 C 0.387 3.613 9 O -0.471 6.471 10 C -0.181 4.181 11 C -0.074 4.074 12 C -0.129 4.129 13 C -0.088 4.088 14 C -0.093 4.093 15 C 0.172 3.828 16 N -0.464 5.464 17 C 0.553 3.447 18 O -0.576 6.576 19 C -0.523 4.523 20 H 0.083 0.917 21 C 0.087 3.913 22 N -0.773 5.773 23 Si 0.904 3.096 24 H -0.268 1.268 25 H -0.284 1.284 26 H -0.267 1.267 27 H 0.053 0.947 28 H 0.053 0.947 29 H 0.054 0.946 30 H 0.090 0.910 31 H 0.039 0.961 32 H 0.045 0.955 33 H 0.087 0.913 34 H 0.107 0.893 35 H 0.083 0.917 36 H 0.404 0.596 37 H 0.133 0.867 38 H 0.127 0.873 39 H 0.131 0.869 40 H 0.143 0.857 41 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.133 15.083 10.847 18.701 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C 0.033 3.967 3 C -0.230 4.230 4 N -0.364 5.364 5 C 0.064 3.936 6 C 0.069 3.931 7 N -0.250 5.250 8 C 0.185 3.815 9 O -0.278 6.278 10 C -0.187 4.187 11 C -0.094 4.094 12 C -0.147 4.147 13 C -0.109 4.109 14 C -0.112 4.112 15 C 0.044 3.956 16 N -0.179 5.179 17 C 0.361 3.639 18 O -0.458 6.458 19 C -0.560 4.560 20 H 0.101 0.899 21 C -0.132 4.132 22 N -0.402 5.402 23 Si 0.729 3.271 24 H -0.193 1.193 25 H -0.210 1.210 26 H -0.192 1.192 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.074 0.926 30 H 0.108 0.892 31 H 0.058 0.942 32 H 0.064 0.936 33 H 0.105 0.895 34 H 0.125 0.875 35 H 0.101 0.899 36 H 0.263 0.737 37 H 0.150 0.850 38 H 0.145 0.855 39 H 0.149 0.851 40 H 0.161 0.839 41 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -2.073 13.817 9.297 16.782 hybrid contribution 0.905 0.680 1.296 1.721 sum -1.169 14.498 10.593 17.993 Atomic orbital electron populations 1.22107 0.96677 1.01528 1.00968 1.20664 0.92564 0.92298 0.91223 1.22462 1.00625 0.97413 1.02542 1.48161 1.50897 1.35145 1.02185 1.20010 0.92733 0.93507 0.87306 1.24086 0.91889 0.88563 0.88559 1.67700 1.33636 1.01856 1.21849 1.19591 0.88805 0.85114 0.87977 1.84657 1.72520 1.18567 1.52082 1.19602 0.99679 0.96150 1.03261 1.20791 0.93696 0.98883 0.96042 1.20916 0.97978 0.96165 0.99639 1.21011 0.98821 0.92732 0.98354 1.20880 0.92674 1.01102 0.96514 1.19102 0.94718 0.87616 0.94195 1.68924 1.02429 1.35634 1.10872 1.18424 0.77163 0.77657 0.90699 1.90588 1.62614 1.63886 1.28712 1.21046 1.22536 1.19784 0.92616 0.89885 1.25720 0.95607 0.95700 0.96138 1.70023 1.23695 1.23343 1.23162 0.86491 0.79101 0.78940 0.82554 1.19288 1.20968 1.19210 0.92837 0.92834 0.92639 0.89209 0.94227 0.93577 0.89504 0.87493 0.89862 0.73680 0.84955 0.85472 0.85102 0.83901 0.92317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.56 9.07 37.16 0.34 -2.22 16 2 C 0.14 2.85 3.25 -67.93 -0.22 2.63 16 3 C -0.17 -3.31 8.63 37.16 0.32 -2.99 16 4 N -0.63 -14.55 2.39 -169.12 -0.40 -14.95 16 5 C 0.19 3.74 5.06 -5.19 -0.03 3.71 16 6 C 0.34 6.54 6.69 -157.21 -1.05 5.49 16 7 N -0.53 -9.04 7.29 -10.41 -0.08 -9.11 16 8 C 0.39 5.80 7.89 -16.10 -0.13 5.67 16 9 O -0.47 -5.34 12.94 -17.51 -0.23 -5.57 16 10 C -0.18 -2.72 5.75 -106.71 -0.61 -3.33 16 11 C -0.07 -0.85 9.61 -39.60 -0.38 -1.23 16 12 C -0.13 -1.33 9.96 -39.89 -0.40 -1.73 16 13 C -0.09 -1.01 9.95 -39.91 -0.40 -1.41 16 14 C -0.09 -1.41 10.01 -39.56 -0.40 -1.80 16 15 C 0.17 3.02 6.61 -84.85 -0.56 2.45 16 16 N -0.46 -9.38 9.09 -8.80 -0.08 -9.46 16 17 C 0.55 15.91 7.59 -12.99 -0.10 15.81 16 18 O -0.58 -18.94 14.38 5.20 0.07 -18.86 16 19 C -0.52 -14.66 8.33 -35.63 -0.30 -14.96 16 20 H 0.08 2.15 5.26 -52.49 -0.28 1.88 16 21 C 0.09 2.46 5.50 -17.37 -0.10 2.36 16 22 N -0.77 -23.51 11.84 55.55 0.66 -22.86 16 23 Si 0.90 20.54 29.56 -169.99 -5.02 15.51 16 24 H -0.27 -5.90 7.11 56.52 0.40 -5.49 16 25 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 26 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 27 H 0.05 0.80 6.52 -51.93 -0.34 0.47 16 28 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 30 H 0.09 2.15 6.91 -51.93 -0.36 1.79 16 31 H 0.04 0.87 8.14 -51.93 -0.42 0.44 16 32 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 33 H 0.09 1.61 4.85 -51.93 -0.25 1.36 16 34 H 0.11 2.12 6.26 -51.93 -0.33 1.79 16 35 H 0.08 1.37 6.17 -51.93 -0.32 1.05 16 36 H 0.40 2.25 9.06 45.56 0.41 2.66 16 37 H 0.13 1.17 7.73 -52.48 -0.41 0.76 16 38 H 0.13 0.91 8.06 -52.49 -0.42 0.49 16 39 H 0.13 1.12 8.06 -52.49 -0.42 0.69 16 40 H 0.14 2.19 8.06 -52.49 -0.42 1.77 16 41 H 0.27 7.43 8.29 -40.82 -0.34 7.09 16 LS Contribution 340.48 15.07 5.13 5.13 Total: -1.00 -37.23 340.48 -7.91 -45.14 By element: Atomic # 1 Polarization: 10.53 SS G_CDS: -3.96 Total: 6.57 kcal Atomic # 6 Polarization: 12.46 SS G_CDS: -4.00 Total: 8.45 kcal Atomic # 7 Polarization: -56.48 SS G_CDS: 0.10 Total: -56.38 kcal Atomic # 8 Polarization: -24.28 SS G_CDS: -0.15 Total: -24.43 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.51 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -37.23 -7.91 -45.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355661137.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.071 kcal (2) G-P(sol) polarization free energy of solvation -37.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.140 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds