Wall clock time and date at job start Tue Mar 31 2020 12:10:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47231 * 2 1 4 4 N 1.46505 * 109.46830 * 120.00110 * 2 1 3 5 5 C 1.46493 * 120.00076 * 304.77755 * 4 2 1 6 6 C 1.50709 * 109.47205 * 262.67446 * 5 4 2 7 7 H 1.07991 * 119.99724 * 359.97438 * 6 5 4 8 8 C 1.37873 * 119.99993 * 180.02562 * 6 5 4 9 9 N 1.31519 * 120.00249 * 359.97438 * 8 6 5 10 10 Si 1.86798 * 120.00234 * 179.97438 * 8 6 5 11 11 H 1.48508 * 109.46794 * 59.99660 * 10 8 6 12 12 H 1.48501 * 109.47543 * 179.97438 * 10 8 6 13 13 H 1.48500 * 109.46995 * 300.00154 * 10 8 6 14 14 C 1.34779 * 119.99981 * 124.78148 * 4 2 1 15 15 O 1.21602 * 119.99571 * 3.25105 * 14 4 2 16 16 C 1.47487 * 120.00064 * 183.24905 * 14 4 2 17 17 N 1.33522 * 119.92818 * 354.19256 * 16 14 4 18 18 N 1.28386 * 123.16601 * 180.27574 * 17 16 14 19 19 C 1.34036 * 121.92437 * 359.74692 * 18 17 16 20 20 C 1.40255 * 121.55723 * 179.97438 * 19 18 17 21 21 C 1.36302 * 119.68573 * 180.02562 * 20 19 18 22 22 C 1.39208 * 121.10263 * 359.95528 * 21 20 19 23 23 C 1.36390 * 120.81986 * 0.02562 * 22 21 20 24 24 C 1.39992 * 119.49068 * 359.97438 * 23 22 21 25 25 C 1.39871 * 119.93040 * 173.95284 * 16 14 4 26 26 O 1.35265 * 121.37822 * 0.02562 * 25 16 14 27 27 H 1.09002 * 109.47560 * 299.99624 * 1 2 3 28 28 H 1.09000 * 109.47302 * 59.99823 * 1 2 3 29 29 H 1.09005 * 109.47066 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47012 * 239.99845 * 2 1 3 31 31 H 1.08997 * 109.47596 * 179.97438 * 3 2 1 32 32 H 1.09000 * 109.47122 * 300.00287 * 3 2 1 33 33 H 1.09001 * 109.47249 * 59.99990 * 3 2 1 34 34 H 1.09004 * 109.47631 * 22.67175 * 5 4 2 35 35 H 1.09002 * 109.47701 * 142.67493 * 5 4 2 36 36 H 0.96994 * 120.00393 * 180.02562 * 9 8 6 37 37 H 1.08005 * 120.15450 * 0.05108 * 20 19 18 38 38 H 1.08005 * 119.44333 * 179.97438 * 21 20 19 39 39 H 1.08008 * 119.59084 * 180.02562 * 22 21 20 40 40 H 1.07996 * 120.25468 * 179.97438 * 23 22 21 41 41 H 0.96705 * 114.00112 * 269.71097 * 26 25 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 7 2.0183 -0.6907 1.1962 5 6 1.5801 -0.2541 2.5242 6 6 2.6222 0.6548 3.1234 7 1 3.5211 0.8840 2.5705 8 6 2.4285 1.1929 4.3779 9 7 1.3340 0.9134 5.0515 10 14 3.7204 2.3190 5.1210 11 1 3.9054 3.5049 4.2465 12 1 3.2763 2.7616 6.4672 13 1 5.0066 1.5861 5.2397 14 6 2.8706 -1.7276 1.0749 15 8 3.2806 -2.0524 -0.0229 16 6 3.3061 -2.4684 2.2736 17 7 2.9490 -2.0410 3.4871 18 7 3.2970 -2.6341 4.5713 19 6 4.0500 -3.7429 4.5622 20 6 4.4262 -4.3844 5.7514 21 6 5.1933 -5.5098 5.6978 22 6 5.6117 -6.0376 4.4794 23 6 5.2646 -5.4406 3.3032 24 6 4.4773 -4.2832 3.3238 25 6 4.0881 -3.6200 2.1365 26 8 4.4605 -4.0777 0.9194 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.8933 -0.5139 -0.8900 31 1 3.1299 1.4425 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 0.6360 0.2836 2.4369 35 1 1.4445 -1.1244 3.1664 36 1 1.1975 1.2923 5.9339 37 1 4.1092 -3.9888 6.7050 38 1 5.4811 -6.0004 6.6159 39 1 6.2187 -6.9308 4.4654 40 1 5.5945 -5.8576 2.3632 41 1 3.8387 -4.7068 0.5285 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000735653265.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:10:09 Heat of formation + Delta-G solvation = 25.898457 kcal Electronic energy + Delta-G solvation = -26994.464703 eV Core-core repulsion = 23262.439159 eV Total energy + Delta-G solvation = -3732.025544 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.17214 -39.18259 -37.68377 -37.39837 -35.67454 -32.98950 -32.30503 -31.68155 -30.74871 -29.83815 -27.09201 -26.63830 -24.82021 -24.76957 -22.87786 -22.13468 -21.53745 -19.11412 -18.76885 -18.23161 -17.47358 -16.53021 -15.94797 -15.88052 -15.44114 -15.03877 -14.56928 -14.32342 -14.26292 -13.95858 -13.85012 -13.53725 -13.07668 -12.54382 -12.52575 -12.21602 -12.12265 -12.01340 -11.77708 -11.65477 -11.50149 -11.03762 -10.93168 -10.74878 -10.69975 -10.45645 -10.18844 -10.08826 -9.85951 -9.52264 -9.19193 -9.15726 -8.84014 -8.22039 -8.16124 -7.60527 -5.96313 -3.92892 0.11108 0.69746 1.77459 2.74276 3.36208 3.40000 3.43275 3.59070 3.65056 3.85461 4.25418 4.37502 4.50697 4.54177 4.70586 4.85314 4.99734 5.14147 5.23395 5.41654 5.48005 5.54826 5.69196 5.71371 5.83251 5.86034 5.91777 6.12571 6.19202 6.21089 6.28624 6.31909 6.38381 6.44460 6.72167 6.74456 6.90087 7.03666 7.51937 7.57312 7.75061 7.95694 8.30917 8.33183 8.83315 9.06197 9.17164 9.64222 11.11440 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.011624 B = 0.006193 C = 0.004453 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2408.135160 B = 4519.820822 C = 6286.253452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.134 3.866 3 C -0.154 4.154 4 N -0.569 5.569 5 C 0.224 3.776 6 C -0.498 4.498 7 H 0.051 0.949 8 C 0.075 3.925 9 N -0.877 5.877 10 Si 0.885 3.115 11 H -0.279 1.279 12 H -0.286 1.286 13 H -0.280 1.280 14 C 0.570 3.430 15 O -0.558 6.558 16 C -0.033 4.033 17 N -0.094 5.094 18 N -0.218 5.218 19 C 0.084 3.916 20 C -0.082 4.082 21 C -0.099 4.099 22 C -0.116 4.116 23 C -0.086 4.086 24 C -0.117 4.117 25 C 0.184 3.816 26 O -0.458 6.458 27 H 0.069 0.931 28 H 0.059 0.941 29 H 0.051 0.949 30 H 0.086 0.914 31 H 0.052 0.948 32 H 0.050 0.950 33 H 0.076 0.924 34 H 0.035 0.965 35 H 0.079 0.921 36 H 0.262 0.738 37 H 0.143 0.857 38 H 0.132 0.868 39 H 0.129 0.871 40 H 0.135 0.865 41 H 0.398 0.602 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.940 -12.451 -2.672 13.069 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C 0.031 3.969 3 C -0.212 4.212 4 N -0.298 5.298 5 C 0.104 3.896 6 C -0.538 4.538 7 H 0.069 0.931 8 C -0.129 4.129 9 N -0.515 5.515 10 Si 0.713 3.287 11 H -0.205 1.205 12 H -0.212 1.212 13 H -0.206 1.206 14 C 0.356 3.644 15 O -0.438 6.438 16 C -0.166 4.166 17 N 0.048 4.952 18 N -0.075 5.075 19 C -0.043 4.043 20 C -0.103 4.103 21 C -0.119 4.119 22 C -0.135 4.135 23 C -0.105 4.105 24 C -0.125 4.125 25 C 0.125 3.875 26 O -0.268 6.268 27 H 0.088 0.912 28 H 0.078 0.922 29 H 0.070 0.930 30 H 0.104 0.896 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.095 0.905 34 H 0.052 0.948 35 H 0.096 0.904 36 H 0.072 0.928 37 H 0.161 0.839 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.153 0.847 41 H 0.258 0.742 Dipole moment (debyes) X Y Z Total from point charges 2.732 -11.147 -2.239 11.693 hybrid contribution 1.273 -0.541 -0.226 1.401 sum 4.005 -11.688 -2.465 12.599 Atomic orbital electron populations 1.22132 0.95368 1.01739 1.02407 1.20932 0.93666 0.93597 0.88713 1.22071 1.01375 0.95681 1.02030 1.48344 1.42736 1.28871 1.09886 1.20135 0.95499 0.97510 0.76421 1.21217 1.04673 1.26720 1.01215 0.93089 1.24734 0.95227 0.96387 0.96522 1.69886 1.25402 1.43521 1.12682 0.86780 0.82393 0.81089 0.78432 1.20481 1.21196 1.20557 1.17327 0.79841 0.80978 0.86304 1.90721 1.57642 1.69327 1.26128 1.23409 1.00031 0.96732 0.96448 1.74623 1.10025 1.17321 0.93264 1.74273 1.08867 1.03827 1.20537 1.20616 0.96289 0.94438 0.92968 1.20834 0.97344 0.94875 0.97218 1.20989 0.96911 0.95722 0.98317 1.20955 1.00134 1.00230 0.92197 1.20820 0.96558 0.93758 0.99330 1.19138 1.02058 0.98228 0.93108 1.19463 0.90534 0.91965 0.85549 1.84613 1.49081 1.64602 1.28495 0.91240 0.92194 0.93003 0.89600 0.92875 0.93093 0.90525 0.94760 0.90441 0.92822 0.83876 0.85032 0.85301 0.84712 0.74247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.54 9.10 37.16 0.34 -2.20 16 2 C 0.13 2.51 3.24 -67.93 -0.22 2.29 16 3 C -0.15 -2.78 8.94 37.15 0.33 -2.45 16 4 N -0.57 -12.43 2.38 -168.71 -0.40 -12.83 16 5 C 0.22 5.45 4.10 -5.19 -0.02 5.43 16 6 C -0.50 -13.25 7.11 -34.44 -0.24 -13.50 16 7 H 0.05 1.42 7.81 -52.49 -0.41 1.01 16 8 C 0.07 2.03 5.46 -17.82 -0.10 1.94 16 9 N -0.88 -24.53 13.29 55.43 0.74 -23.79 16 10 Si 0.88 21.65 29.54 -169.99 -5.02 16.63 16 11 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 12 H -0.29 -6.91 7.11 56.52 0.40 -6.50 16 13 H -0.28 -7.01 7.11 56.52 0.40 -6.60 16 14 C 0.57 12.67 7.57 -12.49 -0.09 12.57 16 15 O -0.56 -12.61 14.58 -16.24 -0.24 -12.85 16 16 C -0.03 -0.71 6.71 -82.75 -0.55 -1.27 16 17 N -0.09 -2.18 6.13 33.32 0.20 -1.97 16 18 N -0.22 -4.73 11.54 32.20 0.37 -4.36 16 19 C 0.08 1.48 6.68 -84.82 -0.57 0.92 16 20 C -0.08 -1.13 9.99 -39.52 -0.40 -1.52 16 21 C -0.10 -1.05 9.94 -39.92 -0.40 -1.44 16 22 C -0.12 -1.18 9.96 -39.89 -0.40 -1.57 16 23 C -0.09 -1.06 9.62 -39.59 -0.38 -1.44 16 24 C -0.12 -1.90 5.75 -106.69 -0.61 -2.52 16 25 C 0.18 3.31 6.80 -37.75 -0.26 3.06 16 26 O -0.46 -7.18 11.09 -39.01 -0.43 -7.61 16 27 H 0.07 1.20 6.50 -51.93 -0.34 0.86 16 28 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 29 H 0.05 0.81 8.14 -51.93 -0.42 0.38 16 30 H 0.09 1.61 6.93 -51.93 -0.36 1.25 16 31 H 0.05 1.03 8.14 -51.93 -0.42 0.60 16 32 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 33 H 0.08 1.53 7.33 -51.93 -0.38 1.15 16 34 H 0.03 0.86 6.20 -51.93 -0.32 0.54 16 35 H 0.08 2.03 5.20 -54.14 -0.28 1.75 16 36 H 0.26 7.07 8.31 -40.82 -0.34 6.73 16 37 H 0.14 1.79 8.06 -52.48 -0.42 1.37 16 38 H 0.13 0.96 8.06 -52.48 -0.42 0.53 16 39 H 0.13 0.89 8.06 -52.48 -0.42 0.47 16 40 H 0.14 1.37 7.74 -52.49 -0.41 0.96 16 41 H 0.40 4.29 9.06 45.56 0.41 4.70 16 LS Contribution 342.65 15.07 5.16 5.16 Total: -1.00 -32.39 342.65 -7.36 -39.75 By element: Atomic # 1 Polarization: 7.75 SS G_CDS: -4.18 Total: 3.57 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -3.57 Total: -1.70 kcal Atomic # 7 Polarization: -43.87 SS G_CDS: 0.91 Total: -42.96 kcal Atomic # 8 Polarization: -19.79 SS G_CDS: -0.67 Total: -20.46 kcal Atomic # 14 Polarization: 21.65 SS G_CDS: -5.02 Total: 16.63 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -32.39 -7.36 -39.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000735653265.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.650 kcal (2) G-P(sol) polarization free energy of solvation -32.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.752 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds