Wall clock time and date at job start Tue Mar 31 2020 11:58:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52999 * 109.47724 * 2 1 4 4 H 1.08997 * 109.46927 * 305.00335 * 3 2 1 5 5 C 1.50698 * 109.47608 * 184.99950 * 3 2 1 6 6 H 1.07998 * 120.00212 * 240.00008 * 5 3 2 7 7 C 1.37875 * 119.99952 * 59.99628 * 5 3 2 8 8 N 1.31518 * 120.00124 * 0.02562 * 7 5 3 9 9 Si 1.86802 * 119.99990 * 180.02562 * 7 5 3 10 10 H 1.48498 * 109.46907 * 90.00525 * 9 7 5 11 11 H 1.48496 * 109.47210 * 210.00222 * 9 7 5 12 12 H 1.48495 * 109.47295 * 330.00251 * 9 7 5 13 13 O 1.45200 * 109.47072 * 64.99454 * 3 2 1 14 14 C 1.34773 * 117.00435 * 270.00781 * 13 3 2 15 15 O 1.21543 * 119.99671 * 359.97438 * 14 13 3 16 16 C 1.47137 * 120.00188 * 180.02562 * 14 13 3 17 17 C 1.38049 * 126.82196 * 0.02562 * 16 14 13 18 18 N 1.34118 * 107.88155 * 179.97438 * 17 16 14 19 19 C 1.46499 * 125.15410 * 180.02562 * 18 17 16 20 20 N 1.39765 * 109.69274 * 0.26072 * 18 17 16 21 21 C 1.31357 * 109.10269 * 359.54897 * 20 18 17 22 22 C 1.48287 * 126.52020 * 180.15921 * 21 20 18 23 23 C 1.39805 * 120.53883 * 325.32767 * 22 21 20 24 24 C 1.38405 * 118.30755 * 179.97438 * 23 22 21 25 25 C 1.38319 * 119.28614 * 359.97438 * 24 23 22 26 26 N 1.31888 * 121.04210 * 0.02562 * 25 24 23 27 27 C 1.31740 * 121.85448 * 359.72683 * 26 25 24 28 28 H 1.09006 * 109.46749 * 300.00303 * 1 2 3 29 29 H 1.09006 * 109.47079 * 59.99937 * 1 2 3 30 30 H 1.08999 * 109.47724 * 180.02562 * 1 2 3 31 31 H 1.08996 * 109.47467 * 239.99609 * 2 1 3 32 32 H 1.09006 * 109.47079 * 120.00063 * 2 1 3 33 33 H 0.96999 * 120.00418 * 179.97438 * 8 7 5 34 34 H 1.07998 * 126.05820 * 359.94065 * 17 16 14 35 35 H 1.09002 * 109.47391 * 89.99669 * 19 18 17 36 36 H 1.09001 * 109.46813 * 329.99725 * 19 18 17 37 37 H 1.09004 * 109.47041 * 209.99852 * 19 18 17 38 38 H 1.08002 * 120.85075 * 359.95263 * 23 22 21 39 39 H 1.07995 * 120.35742 * 180.02562 * 24 23 22 40 40 H 1.08008 * 119.48061 * 179.97438 * 25 24 23 41 41 H 1.07998 * 119.70817 * 180.29031 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 1 1.6055 1.9815 -0.8418 5 6 3.5420 1.4442 -0.1238 6 1 4.1473 1.8887 0.6523 7 6 4.1433 0.8782 -1.2279 8 7 3.4062 0.3372 -2.1733 9 14 6.0051 0.8798 -1.3810 10 1 6.5538 -0.3523 -0.7597 11 1 6.3837 0.9212 -2.8163 12 1 6.5577 2.0716 -0.6888 13 8 1.6559 2.0917 1.2406 14 6 0.4680 2.7280 1.2560 15 8 -0.2277 2.7403 0.2594 16 6 0.0137 3.4087 2.4788 17 6 0.6863 3.4846 3.6820 18 7 -0.0707 4.1929 4.5329 19 6 0.2848 4.5039 5.9197 20 7 -1.2524 4.5848 3.8978 21 6 -1.2431 4.1419 2.6612 22 6 -2.3047 4.3399 1.6450 23 6 -3.6510 4.3696 2.0205 24 6 -4.6035 4.5577 1.0342 25 6 -4.1968 4.7095 -0.2791 26 7 -2.9188 4.6770 -0.6034 27 6 -1.9762 4.5053 0.3009 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5139 -0.8899 32 1 1.8933 -0.5139 0.8900 33 1 3.8292 -0.0606 -2.9502 34 1 1.6508 3.0501 3.8996 35 1 0.8320 5.4460 5.9520 36 1 0.9098 3.7067 6.3220 37 1 -0.6230 4.5903 6.5168 38 1 -3.9405 4.2484 3.0539 39 1 -5.6530 4.5866 1.2873 40 1 -4.9375 4.8561 -1.0514 41 1 -0.9399 4.4890 -0.0027 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000787087025.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:58:45 Heat of formation + Delta-G solvation = 26.682274 kcal Electronic energy + Delta-G solvation = -26123.345878 eV Core-core repulsion = 22391.354323 eV Total energy + Delta-G solvation = -3731.991555 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.22346 -39.69707 -39.13728 -35.70262 -34.01746 -33.46220 -32.16008 -31.39112 -30.99954 -30.37506 -27.37691 -26.81675 -24.16321 -23.43839 -23.19773 -22.36697 -20.61763 -19.93001 -19.34569 -17.69779 -16.89198 -16.47150 -16.34488 -16.08210 -15.68498 -15.54030 -14.97547 -14.89084 -14.39524 -13.92771 -13.70911 -13.29216 -13.09191 -12.97772 -12.88128 -12.79017 -12.55630 -12.05563 -11.76358 -11.39411 -11.31139 -11.14858 -10.97197 -10.94127 -10.59503 -10.25205 -10.20781 -9.76755 -9.65488 -9.49289 -9.31896 -9.24418 -8.85558 -8.74898 -8.41644 -8.33972 -6.15690 -4.22842 0.88757 1.42735 1.54665 2.18514 2.32292 3.25362 3.31228 3.34451 3.71477 3.73413 4.00934 4.17892 4.37591 4.47969 4.70532 4.82091 4.88432 4.91578 5.05097 5.13549 5.13680 5.16293 5.32042 5.50345 5.60475 5.90091 5.98534 6.09294 6.29196 6.32096 6.33557 6.37915 6.53983 6.71761 6.85172 6.94233 7.04248 7.23388 7.32020 7.44364 7.64824 7.78464 8.00304 8.17687 8.19910 8.69811 8.94567 9.42311 10.90946 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.013363 B = 0.004220 C = 0.003476 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2094.798139 B = 6633.871663 C = 8053.372766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.135 4.135 3 C 0.224 3.776 4 H 0.050 0.950 5 C -0.521 4.521 6 H 0.067 0.933 7 C 0.064 3.936 8 N -0.886 5.886 9 Si 0.909 3.091 10 H -0.279 1.279 11 H -0.284 1.284 12 H -0.272 1.272 13 O -0.354 6.354 14 C 0.530 3.470 15 O -0.513 6.513 16 C -0.261 4.261 17 C 0.129 3.871 18 N -0.369 5.369 19 C 0.098 3.902 20 N -0.289 5.289 21 C 0.172 3.828 22 C -0.080 4.080 23 C -0.046 4.046 24 C -0.191 4.191 25 C 0.106 3.894 26 N -0.486 5.486 27 C 0.169 3.831 28 H 0.032 0.968 29 H 0.054 0.946 30 H 0.030 0.970 31 H 0.108 0.892 32 H 0.039 0.961 33 H 0.266 0.734 34 H 0.197 0.803 35 H 0.079 0.921 36 H 0.093 0.907 37 H 0.091 0.909 38 H 0.133 0.867 39 H 0.134 0.866 40 H 0.154 0.846 41 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.217 7.408 13.844 18.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.173 4.173 3 C 0.172 3.828 4 H 0.067 0.933 5 C -0.559 4.559 6 H 0.086 0.914 7 C -0.139 4.139 8 N -0.524 5.524 9 Si 0.736 3.264 10 H -0.204 1.204 11 H -0.210 1.210 12 H -0.197 1.197 13 O -0.270 6.270 14 C 0.375 3.625 15 O -0.405 6.405 16 C -0.273 4.273 17 C -0.019 4.019 18 N -0.148 5.148 19 C -0.043 4.043 20 N -0.108 5.108 21 C 0.004 3.996 22 C -0.084 4.084 23 C -0.074 4.074 24 C -0.211 4.211 25 C -0.051 4.051 26 N -0.194 5.194 27 C 0.011 3.989 28 H 0.051 0.949 29 H 0.073 0.927 30 H 0.049 0.951 31 H 0.126 0.874 32 H 0.058 0.942 33 H 0.076 0.924 34 H 0.213 0.787 35 H 0.098 0.902 36 H 0.111 0.889 37 H 0.110 0.890 38 H 0.151 0.849 39 H 0.152 0.848 40 H 0.171 0.829 41 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges -10.693 8.069 13.545 19.051 hybrid contribution 1.146 -0.810 0.306 1.436 sum -9.547 7.260 13.851 18.322 Atomic orbital electron populations 1.21849 0.98288 0.98842 1.00924 1.22011 0.92680 0.99397 1.03178 1.20666 0.94828 0.88694 0.78632 0.93253 1.21023 0.89702 1.38977 1.06215 0.91438 1.24867 0.99060 0.94838 0.95094 1.69892 1.35301 1.37753 1.09427 0.86315 0.84114 0.78568 0.77370 1.20447 1.20987 1.19690 1.86513 1.33580 1.62667 1.44261 1.19713 0.80689 0.76171 0.85935 1.90753 1.55352 1.59205 1.35150 1.20656 0.97825 1.13875 0.94988 1.23221 0.97162 0.92481 0.89084 1.48110 1.13913 1.41085 1.11703 1.21992 1.02606 1.02752 0.76953 1.77283 1.03057 1.23547 1.06958 1.21535 0.92571 0.94525 0.90964 1.18705 0.91099 1.05643 0.92964 1.21566 0.91511 0.94254 1.00022 1.21970 1.00390 1.04466 0.94247 1.22923 0.93298 0.93807 0.95046 1.67871 1.01156 1.13127 1.37246 1.23534 1.00377 0.88047 0.86912 0.94885 0.92692 0.95079 0.87421 0.94178 0.92402 0.78660 0.90245 0.88863 0.89045 0.84884 0.84813 0.82896 0.80602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.17 8.56 37.16 0.32 -2.85 16 2 C -0.13 -3.33 5.49 -26.73 -0.15 -3.48 16 3 C 0.22 5.84 2.25 -27.88 -0.06 5.78 16 4 H 0.05 1.43 7.16 -51.93 -0.37 1.06 16 5 C -0.52 -14.27 8.90 -34.44 -0.31 -14.58 16 6 H 0.07 1.81 7.81 -52.49 -0.41 1.40 16 7 C 0.06 1.72 5.29 -17.82 -0.09 1.63 16 8 N -0.89 -24.84 11.29 55.43 0.63 -24.22 16 9 Si 0.91 20.77 29.54 -169.99 -5.02 15.75 16 10 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 11 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 12 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 13 O -0.35 -8.15 9.65 -40.69 -0.39 -8.55 16 14 C 0.53 11.12 6.28 34.34 0.22 11.33 16 15 O -0.51 -11.61 9.66 -19.30 -0.19 -11.80 16 16 C -0.26 -4.50 6.27 -102.96 -0.65 -5.14 16 17 C 0.13 1.73 11.28 -16.62 -0.19 1.54 16 18 N -0.37 -4.40 3.95 -67.63 -0.27 -4.67 16 19 C 0.10 0.63 11.39 59.85 0.68 1.31 16 20 N -0.29 -4.21 12.48 34.58 0.43 -3.78 16 21 C 0.17 2.82 6.96 -80.55 -0.56 2.26 16 22 C -0.08 -1.29 5.74 -104.77 -0.60 -1.89 16 23 C -0.05 -0.62 9.92 -38.93 -0.39 -1.00 16 24 C -0.19 -2.21 10.10 -39.49 -0.40 -2.60 16 25 C 0.11 1.39 11.17 -17.50 -0.20 1.20 16 26 N -0.49 -8.23 10.35 -12.96 -0.13 -8.36 16 27 C 0.17 3.00 8.97 -17.18 -0.15 2.85 16 28 H 0.03 0.72 6.06 -51.93 -0.31 0.40 16 29 H 0.05 1.29 7.79 -51.93 -0.40 0.89 16 30 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 31 H 0.11 2.90 5.95 -51.93 -0.31 2.59 16 32 H 0.04 0.96 8.14 -51.93 -0.42 0.53 16 33 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 34 H 0.20 2.08 8.06 -52.49 -0.42 1.66 16 35 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 36 H 0.09 0.37 8.13 -51.93 -0.42 -0.05 16 37 H 0.09 0.51 8.14 -51.93 -0.42 0.08 16 38 H 0.13 1.52 8.06 -52.49 -0.42 1.09 16 39 H 0.13 1.08 8.06 -52.49 -0.42 0.65 16 40 H 0.15 1.49 8.06 -52.48 -0.42 1.07 16 41 H 0.18 3.44 5.69 -52.49 -0.30 3.14 16 LS Contribution 348.51 15.07 5.25 5.25 Total: -1.00 -32.95 348.51 -7.26 -40.22 By element: Atomic # 1 Polarization: 8.85 SS G_CDS: -5.05 Total: 3.80 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -2.52 Total: -3.65 kcal Atomic # 7 Polarization: -41.68 SS G_CDS: 0.66 Total: -41.03 kcal Atomic # 8 Polarization: -19.77 SS G_CDS: -0.58 Total: -20.35 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -32.95 -7.26 -40.22 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000787087025.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.899 kcal (2) G-P(sol) polarization free energy of solvation -32.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.217 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds