Wall clock time and date at job start Tue Mar 31 2020 10:40:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31010 * 1 3 3 C 1.50702 * 120.00031 * 2 1 4 4 C 1.53002 * 109.46767 * 119.99928 * 3 2 1 5 5 O 1.42901 * 109.47023 * 359.97438 * 3 2 1 6 6 C 1.50696 * 109.46986 * 239.99838 * 3 2 1 7 7 C 1.35357 * 126.75460 * 65.24556 * 6 3 2 8 8 N 1.35303 * 106.17667 * 180.12450 * 7 6 3 9 9 C 1.46503 * 125.86766 * 179.90760 * 8 7 6 10 10 C 1.50701 * 109.46930 * 124.71636 * 9 8 7 11 11 C 1.38307 * 119.92751 * 269.72328 * 10 9 8 12 12 C 1.38105 * 120.06147 * 179.73104 * 11 10 9 13 13 C 1.38872 * 119.93430 * 0.56469 * 12 11 10 14 14 O 1.35750 * 120.06955 * 179.68276 * 13 12 11 15 15 C 1.34838 * 116.99807 * 174.49013 * 14 13 12 16 16 H 1.07994 * 119.99916 * 5.06161 * 15 14 13 17 17 C 1.38659 * 119.99657 * 185.05899 * 15 14 13 18 18 N 1.31558 * 119.99707 * 180.02562 * 17 15 14 19 19 Si 1.86800 * 119.99828 * 0.02562 * 17 15 14 20 20 H 1.48496 * 109.47037 * 90.00289 * 19 17 15 21 21 H 1.48508 * 109.46833 * 209.99679 * 19 17 15 22 22 H 1.48498 * 109.47512 * 329.99801 * 19 17 15 23 23 C 1.38887 * 119.86270 * 359.71205 * 13 12 11 24 24 C 1.38093 * 119.92815 * 359.97438 * 23 13 12 25 25 N 1.28714 * 108.26599 * 359.64540 * 8 7 6 26 26 N 1.28636 * 110.17918 * 0.22109 * 25 8 7 27 27 H 1.08001 * 119.99386 * 0.02562 * 1 2 3 28 28 H 1.07995 * 120.00095 * 179.97438 * 1 2 3 29 29 H 1.08001 * 119.99386 * 179.97438 * 2 1 3 30 30 H 1.09000 * 109.46487 * 179.97438 * 4 3 2 31 31 H 1.08994 * 109.47222 * 299.99741 * 4 3 2 32 32 H 1.09004 * 109.47103 * 60.00190 * 4 3 2 33 33 H 0.96699 * 114.00165 * 300.00103 * 5 3 2 34 34 H 1.08003 * 126.90479 * 0.02562 * 7 6 3 35 35 H 1.09004 * 109.47330 * 244.71575 * 9 8 7 36 36 H 1.08996 * 109.47063 * 4.71945 * 9 8 7 37 37 H 1.07994 * 119.96598 * 359.97438 * 11 10 9 38 38 H 1.07999 * 120.02925 * 180.28229 * 12 11 10 39 39 H 0.96992 * 119.99657 * 179.97438 * 18 17 15 40 40 H 1.08003 * 120.03351 * 179.97438 * 23 13 12 41 41 H 1.07999 * 119.96394 * 180.02562 * 24 23 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3101 0.0000 0.0000 3 6 2.0636 1.3051 0.0000 4 6 2.9432 1.3861 1.2493 5 8 1.1350 2.3913 -0.0006 6 6 2.9300 1.3849 -1.2304 7 6 2.5085 1.4456 -2.5153 8 7 3.6259 1.5020 -3.2762 9 6 3.6654 1.5770 -4.7388 10 6 4.4693 2.7806 -5.1585 11 6 3.8408 3.9978 -5.3490 12 6 4.5756 5.1040 -5.7282 13 6 5.9450 4.9904 -5.9297 14 8 6.6689 6.0745 -6.3087 15 6 8.0071 5.9238 -6.3760 16 1 8.4499 4.9523 -6.2136 17 6 8.8146 7.0162 -6.6537 18 7 10.1203 6.8691 -6.7199 19 14 8.0485 8.6967 -6.9340 20 1 7.9458 9.4160 -5.6389 21 1 8.8979 9.4783 -7.8683 22 1 6.6930 8.5317 -7.5175 23 6 6.5722 3.7654 -5.7431 24 6 5.8330 2.6645 -5.3576 25 7 4.6480 1.4841 -2.4941 26 7 4.2669 1.4147 -1.2675 27 1 -0.5399 0.9354 -0.0004 28 1 -0.5400 -0.9353 -0.0004 29 1 1.8500 -0.9354 0.0004 30 1 3.4885 2.3299 1.2490 31 1 2.3166 1.3284 2.1392 32 1 3.6515 0.5576 1.2493 33 1 0.5440 2.4030 -0.7659 34 1 1.4860 1.4469 -2.8630 35 1 4.1287 0.6740 -5.1365 36 1 2.6503 1.6652 -5.1257 37 1 2.7751 4.0842 -5.1972 38 1 4.0850 6.0552 -5.8723 39 1 10.6851 7.6332 -6.9146 40 1 7.6369 3.6739 -5.8995 41 1 6.3202 1.7117 -5.2120 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000881285506.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:35 Heat of formation + Delta-G solvation = 74.340948 kcal Electronic energy + Delta-G solvation = -25015.656737 eV Core-core repulsion = 21285.731818 eV Total energy + Delta-G solvation = -3729.924920 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.26149 -39.39524 -38.69090 -37.17819 -34.55738 -33.24196 -32.51645 -31.43930 -30.68153 -30.37572 -29.56174 -26.64191 -25.05426 -24.28769 -22.39251 -22.07276 -21.68483 -20.52702 -19.88385 -18.08632 -17.95762 -17.35906 -16.98953 -16.46293 -16.03348 -15.07764 -15.02006 -14.69199 -14.47806 -14.24220 -13.94207 -13.73578 -13.43627 -13.10005 -12.84393 -12.63678 -12.35668 -12.34505 -12.23275 -11.99813 -11.82047 -11.66208 -11.51274 -11.27607 -10.91906 -10.88345 -10.77220 -10.56582 -10.27778 -9.98035 -9.82847 -9.52402 -9.23568 -8.99209 -8.43580 -7.57756 -6.53216 -4.20020 1.56461 1.73928 1.86531 1.98768 2.49911 2.66729 3.15210 3.19654 3.32350 4.00648 4.11065 4.14033 4.30388 4.43025 4.56262 4.65471 4.66386 4.77868 4.88783 4.95083 4.98734 5.13452 5.31104 5.46630 5.47528 5.50104 5.62689 5.74506 5.81557 5.97322 5.97835 6.09371 6.14161 6.23959 6.34915 6.35740 6.59205 6.60892 6.81272 6.99239 7.12946 7.28740 7.43057 7.66985 7.90047 8.58368 8.80652 9.39765 10.53644 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.023635 B = 0.002591 C = 0.002552 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1184.397020 B =10805.989667 C =10969.592168 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C -0.173 4.173 3 C 0.248 3.752 4 C -0.124 4.124 5 O -0.545 6.545 6 C -0.052 4.052 7 C -0.048 4.048 8 N -0.275 5.275 9 C 0.171 3.829 10 C -0.220 4.220 11 C -0.052 4.052 12 C -0.196 4.196 13 C 0.173 3.827 14 O -0.209 6.209 15 C -0.392 4.392 16 H 0.109 0.891 17 C 0.066 3.934 18 N -0.871 5.871 19 Si 0.906 3.094 20 H -0.272 1.272 21 H -0.280 1.280 22 H -0.259 1.259 23 C -0.224 4.224 24 C -0.032 4.032 25 N -0.064 5.064 26 N -0.262 5.262 27 H 0.105 0.895 28 H 0.101 0.899 29 H 0.117 0.883 30 H 0.071 0.929 31 H 0.063 0.937 32 H 0.077 0.923 33 H 0.374 0.626 34 H 0.183 0.817 35 H 0.101 0.899 36 H 0.105 0.895 37 H 0.112 0.888 38 H 0.120 0.880 39 H 0.282 0.718 40 H 0.137 0.863 41 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.659 -13.116 7.534 24.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.192 4.192 3 C 0.205 3.795 4 C -0.182 4.182 5 O -0.350 6.350 6 C -0.191 4.191 7 C -0.200 4.200 8 N -0.068 5.068 9 C 0.052 3.948 10 C -0.222 4.222 11 C -0.071 4.071 12 C -0.216 4.216 13 C 0.119 3.881 14 O -0.112 6.112 15 C -0.467 4.467 16 H 0.126 0.874 17 C -0.139 4.139 18 N -0.508 5.508 19 Si 0.731 3.269 20 H -0.197 1.197 21 H -0.206 1.206 22 H -0.183 1.183 23 C -0.243 4.243 24 C -0.051 4.051 25 N -0.043 5.043 26 N -0.129 5.129 27 H 0.123 0.877 28 H 0.120 0.880 29 H 0.135 0.865 30 H 0.090 0.910 31 H 0.082 0.918 32 H 0.096 0.904 33 H 0.222 0.778 34 H 0.200 0.800 35 H 0.119 0.881 36 H 0.123 0.877 37 H 0.130 0.870 38 H 0.138 0.862 39 H 0.092 0.908 40 H 0.154 0.846 41 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -17.622 -12.594 8.017 23.096 hybrid contribution -1.492 0.496 -1.014 1.871 sum -19.114 -12.098 7.004 23.680 Atomic orbital electron populations 1.23855 0.95775 1.02473 0.99900 1.23493 0.96468 0.98483 1.00788 1.18144 0.86053 0.84340 0.90956 1.21569 0.98355 1.03984 0.94250 1.86662 1.49962 1.49453 1.48929 1.22395 0.92725 1.09219 0.94770 1.23220 0.94479 1.10854 0.91419 1.47889 1.04244 1.44923 1.09733 1.20878 1.02372 0.99287 0.72236 1.18993 0.94546 0.94112 1.14558 1.20442 0.98205 0.91514 0.96923 1.20153 0.91761 0.99239 1.10426 1.19188 0.91025 0.87042 0.90871 1.83570 1.20937 1.32712 1.74004 1.20821 0.76845 0.99041 1.50033 0.87351 1.24506 0.94495 0.99368 0.95530 1.69640 1.02845 1.32722 1.45593 0.86170 0.79949 0.81885 0.78864 1.19713 1.20580 1.18316 1.21272 1.01514 0.92512 1.09030 1.20640 0.92350 0.97860 0.94226 1.78382 1.13034 1.17949 0.94984 1.75077 1.10289 1.16503 1.11024 0.87668 0.88025 0.86473 0.91045 0.91769 0.90387 0.77788 0.79988 0.88125 0.87661 0.86989 0.86240 0.90798 0.84561 0.86808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.16 13.93 29.01 0.40 -0.76 16 2 C -0.17 -1.40 8.69 -36.03 -0.31 -1.71 16 3 C 0.25 2.56 1.28 -92.92 -0.12 2.44 16 4 C -0.12 -1.34 8.36 37.16 0.31 -1.03 16 5 O -0.55 -5.44 11.93 -35.23 -0.42 -5.86 16 6 C -0.05 -0.65 5.81 -82.77 -0.48 -1.14 16 7 C -0.05 -0.51 11.15 -17.05 -0.19 -0.70 16 8 N -0.27 -3.56 3.43 -62.44 -0.21 -3.77 16 9 C 0.17 1.85 6.58 -5.19 -0.03 1.81 16 10 C -0.22 -3.30 5.25 -104.57 -0.55 -3.85 16 11 C -0.05 -0.81 9.69 -39.60 -0.38 -1.19 16 12 C -0.20 -3.70 9.99 -39.40 -0.39 -4.10 16 13 C 0.17 3.85 6.65 -39.11 -0.26 3.59 16 14 O -0.21 -5.37 8.59 0.03 0.00 -5.37 16 15 C -0.39 -10.83 9.95 30.89 0.31 -10.52 16 16 H 0.11 3.06 5.44 -52.49 -0.29 2.77 16 17 C 0.07 1.81 5.49 -17.51 -0.10 1.71 16 18 N -0.87 -24.75 13.96 55.48 0.77 -23.98 16 19 Si 0.91 21.24 28.62 -169.99 -4.86 16.38 16 20 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 21 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 22 H -0.26 -6.06 7.11 56.52 0.40 -5.66 16 23 C -0.22 -4.68 9.17 -39.39 -0.36 -5.04 16 24 C -0.03 -0.55 9.69 -39.61 -0.38 -0.93 16 25 N -0.06 -1.05 12.92 60.35 0.78 -0.27 16 26 N -0.26 -4.23 11.79 33.29 0.39 -3.84 16 27 H 0.11 0.59 6.41 -52.49 -0.34 0.26 16 28 H 0.10 0.52 8.06 -52.49 -0.42 0.09 16 29 H 0.12 0.92 8.06 -52.49 -0.42 0.50 16 30 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 31 H 0.06 0.60 8.14 -51.93 -0.42 0.17 16 32 H 0.08 0.81 8.14 -51.93 -0.42 0.39 16 33 H 0.37 2.33 7.82 45.56 0.36 2.68 16 34 H 0.18 1.13 8.06 -52.48 -0.42 0.71 16 35 H 0.10 0.94 8.08 -51.93 -0.42 0.52 16 36 H 0.11 0.76 8.01 -51.93 -0.42 0.35 16 37 H 0.11 1.36 8.06 -52.49 -0.42 0.94 16 38 H 0.12 2.10 8.06 -52.49 -0.42 1.67 16 39 H 0.28 7.37 8.31 -40.82 -0.34 7.03 16 40 H 0.14 3.01 5.64 -52.48 -0.30 2.72 16 41 H 0.11 1.75 8.06 -52.49 -0.42 1.33 16 LS Contribution 356.74 15.07 5.38 5.38 Total: -1.00 -32.56 356.74 -5.06 -37.62 By element: Atomic # 1 Polarization: 9.46 SS G_CDS: -4.34 Total: 5.12 kcal Atomic # 6 Polarization: -18.87 SS G_CDS: -2.54 Total: -21.42 kcal Atomic # 7 Polarization: -33.59 SS G_CDS: 1.73 Total: -31.85 kcal Atomic # 8 Polarization: -10.80 SS G_CDS: -0.42 Total: -11.22 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -4.86 Total: 16.38 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -32.56 -5.06 -37.62 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000881285506.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.961 kcal (2) G-P(sol) polarization free energy of solvation -32.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.620 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds