Wall clock time and date at job start Tue Mar 31 2020 11:23:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53006 * 109.46501 * 2 1 4 4 H 1.08996 * 109.47464 * 305.00223 * 3 2 1 5 5 C 1.50701 * 109.46796 * 184.99997 * 3 2 1 6 6 H 1.08005 * 119.99832 * 240.00330 * 5 3 2 7 7 C 1.37875 * 119.99936 * 60.00259 * 5 3 2 8 8 N 1.31514 * 120.00112 * 359.97438 * 7 5 3 9 9 Si 1.86801 * 119.99969 * 180.02562 * 7 5 3 10 10 H 1.48499 * 109.47111 * 89.99928 * 9 7 5 11 11 H 1.48504 * 109.47208 * 209.99976 * 9 7 5 12 12 H 1.48499 * 109.46926 * 329.99905 * 9 7 5 13 13 N 1.46503 * 109.46849 * 65.00601 * 3 2 1 14 14 C 1.34780 * 119.99803 * 274.99035 * 13 3 2 15 15 O 1.21595 * 119.99972 * 0.02562 * 14 13 3 16 16 N 1.34772 * 120.00254 * 180.02562 * 14 13 3 17 17 C 1.40013 * 120.00412 * 184.61915 * 16 14 13 18 18 C 1.38886 * 120.00841 * 144.90051 * 17 16 14 19 19 C 1.38026 * 119.99393 * 179.97438 * 18 17 16 20 20 C 1.38839 * 120.00785 * 359.97265 * 19 18 17 21 21 N 1.40326 * 119.99914 * 180.02562 * 20 19 18 22 22 C 1.36091 * 125.94594 * 180.02562 * 21 20 19 23 23 C 1.35383 * 106.05032 * 179.97438 * 22 21 20 24 24 N 1.33757 * 106.53858 * 359.97438 * 23 22 21 25 25 N 1.28607 * 109.05613 * 0.02562 * 24 23 22 26 26 C 1.38845 * 120.00808 * 0.30101 * 20 19 18 27 27 C 1.38027 * 120.00581 * 359.44965 * 26 20 19 28 28 H 1.08995 * 109.47163 * 299.99587 * 1 2 3 29 29 H 1.08999 * 109.47148 * 59.99751 * 1 2 3 30 30 H 1.09001 * 109.46742 * 180.02562 * 1 2 3 31 31 H 1.08995 * 109.47163 * 240.00413 * 2 1 3 32 32 H 1.08994 * 109.47423 * 119.99887 * 2 1 3 33 33 H 0.96996 * 120.00026 * 180.02562 * 8 7 5 34 34 H 0.96996 * 120.00089 * 94.99629 * 13 3 2 35 35 H 0.97008 * 119.99727 * 4.61815 * 16 14 13 36 36 H 1.08002 * 119.99921 * 359.95152 * 18 17 16 37 37 H 1.08003 * 119.99551 * 179.97438 * 19 18 17 38 38 H 1.08001 * 126.97177 * 359.71111 * 22 21 20 39 39 H 1.08002 * 126.72865 * 179.97438 * 23 22 21 40 40 H 1.08002 * 119.99311 * 179.70564 * 26 20 19 41 41 H 1.07995 * 120.00557 * 180.25820 * 27 26 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 1 1.6053 1.9816 -0.8417 5 6 3.5418 1.4445 -0.1238 6 1 4.1471 1.8891 0.6524 7 6 4.1432 0.8787 -1.2280 8 7 3.4062 0.3368 -2.1729 9 14 6.0049 0.8803 -1.3812 10 1 6.5538 -0.3517 -0.7599 11 1 6.3835 0.9218 -2.8165 12 1 6.5574 2.0723 -0.6889 13 7 1.6524 2.0975 1.2519 14 6 0.4350 2.6644 1.3671 15 8 -0.3417 2.6319 0.4321 16 7 0.0786 3.2673 2.5185 17 6 -1.2187 3.7708 2.6728 18 6 -1.8423 3.7157 3.9125 19 6 -3.1210 4.2127 4.0644 20 6 -3.7836 4.7682 2.9781 21 7 -5.0834 5.2740 3.1329 22 6 -5.8415 5.8412 2.1553 23 6 -7.0133 6.1827 2.7412 24 7 -6.9191 5.8151 4.0238 25 7 -5.7664 5.2811 4.2240 26 6 -3.1625 4.8183 1.7374 27 6 -1.8819 4.3261 1.5861 28 1 -0.3633 0.5137 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 1.8934 -0.5137 -0.8900 32 1 1.8934 -0.5138 0.8899 33 1 3.8293 -0.0615 -2.9495 34 1 2.2719 2.1231 1.9978 35 1 0.7209 3.3523 3.2405 36 1 -1.3269 3.2836 4.7576 37 1 -3.6062 4.1695 5.0284 38 1 -5.5631 5.9925 1.1229 39 1 -7.8584 6.6585 2.2660 40 1 -3.6800 5.2462 0.8914 41 1 -1.3972 4.3689 0.6220 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000155967899.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:23:03 Heat of formation + Delta-G solvation = 106.857600 kcal Electronic energy + Delta-G solvation = -25181.956218 eV Core-core repulsion = 21485.734077 eV Total energy + Delta-G solvation = -3696.222141 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.57636 -40.50954 -38.88092 -35.97599 -34.83901 -33.60158 -32.43872 -31.83737 -30.95963 -30.82810 -28.86224 -26.94321 -24.33893 -23.95257 -23.08327 -21.99511 -21.64806 -20.64840 -19.65446 -18.85335 -18.32534 -17.66144 -16.63190 -16.14820 -15.63486 -15.40291 -15.22913 -15.04120 -14.50861 -14.33558 -14.09228 -13.74591 -13.40534 -13.25342 -13.03793 -12.73655 -12.39381 -12.07288 -11.70453 -11.48320 -11.34289 -11.25416 -11.21198 -11.06214 -10.90357 -10.40503 -10.29230 -10.00925 -9.69504 -9.65793 -9.56376 -9.22977 -9.13236 -8.60491 -8.18809 -7.86140 -6.21433 -4.31328 0.44848 1.10169 1.80444 2.09594 2.34083 2.94599 3.18116 3.25939 3.27565 3.38106 3.77364 4.16980 4.23913 4.33846 4.61484 4.71997 4.80737 4.91059 4.99628 5.05736 5.10588 5.22162 5.47137 5.64850 5.80174 5.86198 6.08112 6.13559 6.31013 6.32743 6.38813 6.54614 6.57239 6.86195 6.88176 7.01439 7.21895 7.25190 7.32186 7.55003 7.74558 7.84544 8.08630 8.24977 8.59218 8.70882 9.06611 9.36564 10.83834 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.035481 B = 0.002401 C = 0.002364 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 788.972752 B =11656.809391 C =11840.641096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.129 4.129 3 C 0.286 3.714 4 H 0.051 0.949 5 C -0.536 4.536 6 H 0.061 0.939 7 C 0.068 3.932 8 N -0.881 5.881 9 Si 0.902 3.098 10 H -0.279 1.279 11 H -0.285 1.285 12 H -0.274 1.274 13 N -0.715 5.715 14 C 0.692 3.308 15 O -0.574 6.574 16 N -0.696 5.696 17 C 0.199 3.801 18 C -0.140 4.140 19 C -0.076 4.076 20 C 0.080 3.920 21 N -0.229 5.229 22 C -0.050 4.050 23 C -0.049 4.049 24 N -0.271 5.271 25 N -0.085 5.085 26 C -0.092 4.092 27 C -0.103 4.103 28 H 0.037 0.963 29 H 0.050 0.950 30 H 0.022 0.978 31 H 0.100 0.900 32 H 0.031 0.969 33 H 0.265 0.735 34 H 0.387 0.613 35 H 0.406 0.594 36 H 0.138 0.862 37 H 0.142 0.858 38 H 0.193 0.807 39 H 0.193 0.807 40 H 0.135 0.865 41 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.055 8.817 9.190 16.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.168 4.168 3 C 0.185 3.815 4 H 0.069 0.931 5 C -0.575 4.575 6 H 0.079 0.921 7 C -0.136 4.136 8 N -0.518 5.518 9 Si 0.729 3.271 10 H -0.205 1.205 11 H -0.210 1.210 12 H -0.199 1.199 13 N -0.365 5.365 14 C 0.393 3.607 15 O -0.452 6.452 16 N -0.344 5.344 17 C 0.101 3.899 18 C -0.161 4.161 19 C -0.097 4.097 20 C -0.011 4.011 21 N -0.017 5.017 22 C -0.199 4.199 23 C -0.205 4.205 24 N -0.137 5.137 25 N -0.063 5.063 26 C -0.114 4.114 27 C -0.124 4.124 28 H 0.056 0.944 29 H 0.069 0.931 30 H 0.041 0.959 31 H 0.118 0.882 32 H 0.050 0.950 33 H 0.076 0.924 34 H 0.219 0.781 35 H 0.241 0.759 36 H 0.156 0.844 37 H 0.160 0.840 38 H 0.210 0.790 39 H 0.210 0.790 40 H 0.153 0.847 41 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -11.692 8.237 9.562 17.204 hybrid contribution 1.642 0.195 -0.647 1.776 sum -10.050 8.432 8.915 15.861 Atomic orbital electron populations 1.21815 0.98249 0.98023 1.01189 1.21968 0.92691 0.99800 1.02347 1.18765 0.94121 0.88931 0.79733 0.93103 1.21200 0.90543 1.39348 1.06395 0.92060 1.24874 0.98684 0.94725 0.95326 1.69886 1.35210 1.37336 1.09361 0.86440 0.84701 0.78460 0.77453 1.20514 1.21025 1.19875 1.45878 1.13075 1.58123 1.19457 1.16119 0.83813 0.78734 0.82076 1.90893 1.51735 1.64680 1.37852 1.42972 1.11703 1.61048 1.18641 1.17719 0.85194 0.93061 0.93954 1.20809 0.94548 1.03407 0.97357 1.20645 0.94081 0.96938 0.98003 1.17608 0.81741 1.05426 0.96369 1.44742 1.11948 1.37457 1.07528 1.23858 0.93323 1.04849 0.97846 1.23622 0.99219 1.06134 0.91552 1.75091 1.09836 1.12337 1.16417 1.78322 1.00131 1.19268 1.08596 1.20782 0.95434 1.00491 0.94650 1.21346 0.94078 0.96327 1.00646 0.94398 0.93110 0.95918 0.88175 0.95036 0.92449 0.78073 0.75887 0.84378 0.83975 0.78975 0.78987 0.84708 0.82290 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.89 8.51 37.16 0.32 -2.57 16 2 C -0.13 -2.97 5.45 -26.72 -0.15 -3.12 16 3 C 0.29 6.69 2.24 -69.08 -0.15 6.53 16 4 H 0.05 1.38 7.58 -51.93 -0.39 0.99 16 5 C -0.54 -13.31 8.73 -34.44 -0.30 -13.61 16 6 H 0.06 1.45 7.74 -52.48 -0.41 1.05 16 7 C 0.07 1.73 5.29 -17.82 -0.09 1.63 16 8 N -0.88 -23.63 11.29 55.43 0.63 -23.01 16 9 Si 0.90 19.74 29.54 -169.99 -5.02 14.72 16 10 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 11 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 12 H -0.27 -5.91 7.11 56.52 0.40 -5.50 16 13 N -0.71 -13.24 5.03 -59.81 -0.30 -13.54 16 14 C 0.69 12.13 6.98 -86.92 -0.61 11.52 16 15 O -0.57 -11.85 10.91 5.28 0.06 -11.79 16 16 N -0.70 -8.91 5.34 -14.20 -0.08 -8.98 16 17 C 0.20 2.46 6.30 -83.64 -0.53 1.94 16 18 C -0.14 -1.42 9.96 -39.42 -0.39 -1.82 16 19 C -0.08 -0.82 9.61 -39.44 -0.38 -1.20 16 20 C 0.08 0.92 6.68 -83.52 -0.56 0.36 16 21 N -0.23 -2.73 3.56 -10.45 -0.04 -2.77 16 22 C -0.05 -0.47 10.92 -16.68 -0.18 -0.65 16 23 C -0.05 -0.47 12.05 -17.73 -0.21 -0.69 16 24 N -0.27 -3.60 12.39 30.24 0.37 -3.23 16 25 N -0.08 -1.16 12.41 60.35 0.75 -0.41 16 26 C -0.09 -1.01 9.45 -39.43 -0.37 -1.38 16 27 C -0.10 -1.33 8.69 -39.42 -0.34 -1.67 16 28 H 0.04 0.79 5.64 -51.93 -0.29 0.49 16 29 H 0.05 1.15 7.84 -51.93 -0.41 0.75 16 30 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 31 H 0.10 2.58 5.95 -51.93 -0.31 2.27 16 32 H 0.03 0.70 8.14 -51.93 -0.42 0.27 16 33 H 0.27 6.79 8.31 -40.82 -0.34 6.45 16 34 H 0.39 6.08 8.56 -40.82 -0.35 5.73 16 35 H 0.41 3.82 8.84 -40.82 -0.36 3.45 16 36 H 0.14 1.06 8.06 -52.49 -0.42 0.64 16 37 H 0.14 1.42 7.69 -52.48 -0.40 1.01 16 38 H 0.19 1.06 7.10 -52.49 -0.37 0.69 16 39 H 0.19 1.11 8.06 -52.49 -0.42 0.68 16 40 H 0.14 1.13 6.76 -52.49 -0.35 0.77 16 41 H 0.16 2.38 6.22 -52.49 -0.33 2.05 16 LS Contribution 343.27 15.07 5.17 5.17 Total: -1.00 -31.09 343.27 -7.21 -38.30 By element: Atomic # 1 Polarization: 15.07 SS G_CDS: -4.80 Total: 10.27 kcal Atomic # 6 Polarization: -0.77 SS G_CDS: -3.95 Total: -4.73 kcal Atomic # 7 Polarization: -53.27 SS G_CDS: 1.34 Total: -51.93 kcal Atomic # 8 Polarization: -11.85 SS G_CDS: 0.06 Total: -11.79 kcal Atomic # 14 Polarization: 19.74 SS G_CDS: -5.02 Total: 14.72 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -31.09 -7.21 -38.30 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000155967899.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.153 kcal (2) G-P(sol) polarization free energy of solvation -31.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.067 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.295 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.858 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds