Wall clock time and date at job start Tue Mar 31 2020 10:39:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35252 * 126.06610 * 2 1 4 4 C 1.40430 * 107.86296 * 179.97438 * 3 2 1 5 5 N 1.39984 * 125.97940 * 179.97438 * 4 3 2 6 6 C 1.46506 * 119.99560 * 0.02562 * 5 4 3 7 7 H 1.08997 * 110.27033 * 32.92633 * 6 5 4 8 8 C 1.54345 * 110.30159 * 155.00034 * 6 5 4 9 9 C 1.54342 * 102.39363 * 92.56359 * 8 6 5 10 10 C 1.51380 * 105.17165 * 26.35803 * 9 8 6 11 11 C 1.38519 * 130.35781 * 162.77999 * 10 9 8 12 12 C 1.38068 * 120.24801 * 180.02562 * 11 10 9 13 13 C 1.38478 * 119.90875 * 359.97438 * 12 11 10 14 14 F 1.35095 * 120.05902 * 180.02562 * 13 12 11 15 15 C 1.38330 * 119.87834 * 0.02562 * 13 12 11 16 16 C 1.38227 * 109.75075 * 342.80205 * 10 9 8 17 17 N 1.31229 * 108.04520 * 0.24623 * 4 3 2 18 18 N 1.34961 * 126.06898 * 179.97438 * 2 1 3 19 19 C 1.46496 * 125.97365 * 0.04738 * 18 2 1 20 20 C 1.50705 * 109.46736 * 90.00573 * 19 18 2 21 21 H 1.07997 * 120.00107 * 0.02562 * 20 19 18 22 22 C 1.37875 * 119.99704 * 179.97438 * 20 19 18 23 23 N 1.31506 * 120.00461 * 0.02562 * 22 20 19 24 24 Si 1.86810 * 119.99718 * 180.02562 * 22 20 19 25 25 H 1.48498 * 109.46942 * 359.97438 * 24 22 20 26 26 H 1.48500 * 109.47018 * 120.00121 * 24 22 20 27 27 H 1.48497 * 109.46766 * 239.99951 * 24 22 20 28 28 H 1.09002 * 109.47439 * 90.02402 * 1 2 3 29 29 H 1.09001 * 109.47126 * 210.02205 * 1 2 3 30 30 H 1.08993 * 109.47298 * 330.02478 * 1 2 3 31 31 H 1.07999 * 126.06639 * 0.02562 * 3 2 1 32 32 H 0.96995 * 120.00626 * 180.02562 * 5 4 3 33 33 H 1.08994 * 110.81993 * 210.79126 * 8 6 5 34 34 H 1.09003 * 110.81935 * 334.33805 * 8 6 5 35 35 H 1.09002 * 110.30197 * 145.28214 * 9 8 6 36 36 H 1.08996 * 110.30559 * 267.43385 * 9 8 6 37 37 H 1.07989 * 119.87774 * 0.04516 * 11 10 9 38 38 H 1.07994 * 120.04428 * 180.02562 * 12 11 10 39 39 H 1.08001 * 119.89679 * 179.97438 * 15 13 12 40 40 H 1.08999 * 109.47385 * 210.00209 * 19 18 2 41 41 H 1.08997 * 109.47327 * 330.00919 * 19 18 2 42 42 H 0.97000 * 120.00587 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3033 1.0933 0.0000 4 6 3.6373 0.6546 0.0006 5 7 4.7724 1.4738 0.0003 6 6 4.6238 2.9313 -0.0002 7 1 3.7317 3.2201 0.5555 8 6 5.8747 3.5973 0.6113 9 6 6.7487 3.8652 -0.6323 10 6 5.7731 3.9881 -1.7832 11 6 5.9413 4.5276 -3.0479 12 6 4.8938 4.5313 -3.9474 13 6 3.6703 3.9935 -3.5847 14 9 2.6435 3.9951 -4.4626 15 6 3.5016 3.4546 -2.3219 16 6 4.5522 3.4514 -1.4200 17 7 3.6337 -0.6577 -0.0044 18 7 2.3016 -1.0909 0.0005 19 6 1.8499 -2.4845 0.0001 20 6 1.6962 -2.9623 -1.4209 21 1 1.9136 -2.2948 -2.2416 22 6 1.2790 -4.2519 -1.6732 23 7 1.0147 -5.0650 -0.6739 24 14 1.0890 -4.8444 -3.4346 25 1 1.4452 -3.7454 -4.3676 26 1 1.9887 -6.0028 -3.6670 27 1 -0.3184 -5.2559 -3.6694 28 1 -0.3634 -0.0004 -1.0277 29 1 -0.3633 -0.8898 0.5142 30 1 -0.3633 0.8901 0.5134 31 1 1.9719 2.1212 0.0004 32 1 5.6573 1.0766 0.0004 33 1 5.6123 4.5309 1.1089 34 1 6.3778 2.9182 1.2996 35 1 7.3073 4.7930 -0.5092 36 1 7.4306 3.0319 -0.8019 37 1 6.8953 4.9465 -3.3316 38 1 5.0287 4.9523 -4.9326 39 1 2.5474 3.0354 -2.0386 40 1 2.5842 -3.1046 0.5144 41 1 0.8909 -2.5558 0.5132 42 1 0.7215 -5.9724 -0.8514 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271029446.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:39:31 Heat of formation + Delta-G solvation = 54.316920 kcal Electronic energy + Delta-G solvation = -25546.903622 eV Core-core repulsion = 21828.483185 eV Total energy + Delta-G solvation = -3718.420437 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -48.87660 -40.58366 -39.98225 -36.42314 -34.17087 -33.06056 -31.63731 -30.92185 -30.46267 -28.75318 -26.92321 -26.48776 -25.67876 -23.11011 -22.86029 -21.22487 -21.08450 -19.69525 -18.90637 -17.22809 -16.66274 -16.65097 -16.21288 -15.63635 -15.57264 -15.22397 -15.01444 -14.47743 -14.34674 -14.17010 -13.76565 -13.69448 -13.25500 -13.08748 -12.53545 -12.46936 -12.26032 -12.19156 -12.02781 -11.77812 -11.54123 -11.37869 -11.29840 -11.22564 -11.10393 -10.89817 -10.78953 -10.23902 -10.01462 -9.58719 -9.21665 -9.06244 -8.60995 -8.55005 -7.75982 -7.03834 -6.20893 -4.28594 1.03350 1.13101 2.89169 3.16873 3.22481 3.30356 3.37258 3.55137 3.72675 4.01319 4.21530 4.28562 4.36395 4.43223 4.78053 4.84134 4.89431 5.03276 5.10623 5.12167 5.39874 5.44188 5.54338 5.57016 5.65052 5.76783 5.78033 5.81268 5.98354 6.03130 6.07446 6.08592 6.14923 6.27015 6.34372 6.45055 6.70932 6.81407 6.87698 7.07675 7.20754 7.71059 7.72051 7.94763 8.13464 8.21522 8.77645 8.92471 9.37682 10.85583 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.013924 B = 0.003610 C = 0.003256 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2010.490256 B = 7753.843756 C = 8596.511931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.108 3.892 3 C -0.337 4.337 4 C 0.313 3.687 5 N -0.714 5.714 6 C 0.211 3.789 7 H 0.090 0.910 8 C -0.126 4.126 9 C -0.081 4.081 10 C -0.102 4.102 11 C -0.086 4.086 12 C -0.151 4.151 13 C 0.093 3.907 14 F -0.140 7.140 15 C -0.119 4.119 16 C -0.081 4.081 17 N -0.347 5.347 18 N -0.324 5.324 19 C 0.260 3.740 20 C -0.532 4.532 21 H 0.064 0.936 22 C 0.065 3.935 23 N -0.893 5.893 24 Si 0.904 3.096 25 H -0.272 1.272 26 H -0.281 1.281 27 H -0.281 1.281 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.128 0.872 32 H 0.399 0.601 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.078 0.922 36 H 0.082 0.918 37 H 0.128 0.872 38 H 0.134 0.866 39 H 0.137 0.863 40 H 0.050 0.950 41 H 0.051 0.949 42 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.576 21.021 0.728 22.356 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.026 4.026 3 C -0.369 4.369 4 C 0.057 3.943 5 N -0.355 5.355 6 C 0.103 3.897 7 H 0.108 0.892 8 C -0.164 4.164 9 C -0.118 4.118 10 C -0.103 4.103 11 C -0.104 4.104 12 C -0.170 4.170 13 C 0.073 3.927 14 F -0.119 7.119 15 C -0.138 4.138 16 C -0.083 4.083 17 N -0.178 5.178 18 N -0.104 5.104 19 C 0.142 3.858 20 C -0.571 4.571 21 H 0.082 0.918 22 C -0.138 4.138 23 N -0.531 5.531 24 Si 0.731 3.269 25 H -0.196 1.196 26 H -0.207 1.207 27 H -0.207 1.207 28 H 0.095 0.905 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.146 0.854 32 H 0.234 0.766 33 H 0.105 0.895 34 H 0.106 0.894 35 H 0.096 0.904 36 H 0.101 0.899 37 H 0.146 0.854 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.068 0.932 41 H 0.069 0.931 42 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 8.015 19.716 0.772 21.297 hybrid contribution -0.517 0.033 -1.410 1.502 sum 7.498 19.750 -0.638 21.135 Atomic orbital electron populations 1.20348 0.88335 1.02710 1.03085 1.20845 0.94472 0.87432 0.99805 1.20404 0.90684 0.98013 1.27839 1.19053 0.87333 0.89591 0.98289 1.43312 1.04587 1.01740 1.85872 1.20023 0.99223 0.80249 0.90159 0.89220 1.22585 0.95231 1.01430 0.97194 1.21063 0.96725 1.02533 0.91456 1.20640 0.95745 0.98844 0.95027 1.20388 0.98474 0.99442 0.92114 1.21001 0.92082 1.02941 1.01019 1.17559 0.85188 1.01857 0.88048 1.91501 1.57721 1.94693 1.67956 1.20728 1.00931 1.00335 0.91850 1.20977 0.92985 0.96726 0.97626 1.77362 0.98902 1.08802 1.32733 1.48894 1.01369 1.07378 1.52792 1.19602 0.95756 0.71722 0.98725 1.21378 1.46279 0.97887 0.91525 0.91812 1.24917 0.94778 0.96114 0.97991 1.69924 1.45255 1.07021 1.30910 0.86337 0.77828 0.78821 0.83933 1.19607 1.20671 1.20662 0.90503 0.90872 0.91056 0.85444 0.76646 0.89465 0.89358 0.90358 0.89927 0.85418 0.84828 0.84511 0.93188 0.93115 0.92387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.43 10.11 36.01 0.36 -1.07 16 2 C 0.11 2.19 6.92 -82.28 -0.57 1.62 16 3 C -0.34 -6.23 9.56 -39.82 -0.38 -6.61 16 4 C 0.31 6.08 8.16 -154.55 -1.26 4.82 16 5 N -0.71 -10.60 5.30 -53.68 -0.28 -10.88 16 6 C 0.21 2.42 3.23 -68.04 -0.22 2.20 16 7 H 0.09 1.03 7.09 -51.93 -0.37 0.66 16 8 C -0.13 -1.00 6.67 -25.32 -0.17 -1.17 16 9 C -0.08 -0.63 6.77 -26.85 -0.18 -0.81 16 10 C -0.10 -1.06 6.14 -104.19 -0.64 -1.70 16 11 C -0.09 -0.85 10.04 -39.54 -0.40 -1.24 16 12 C -0.15 -1.66 10.03 -39.56 -0.40 -2.06 16 13 C 0.09 1.24 7.30 -39.46 -0.29 0.95 16 14 F -0.14 -2.01 17.27 2.25 0.04 -1.97 16 15 C -0.12 -1.64 10.02 -39.46 -0.40 -2.03 16 16 C -0.08 -1.00 5.77 -104.21 -0.60 -1.60 16 17 N -0.35 -8.13 12.59 31.41 0.40 -7.73 16 18 N -0.32 -7.72 3.59 -58.33 -0.21 -7.93 16 19 C 0.26 6.78 5.99 -5.19 -0.03 6.75 16 20 C -0.53 -14.96 9.39 -34.44 -0.32 -15.28 16 21 H 0.06 1.87 7.81 -52.49 -0.41 1.46 16 22 C 0.06 1.80 5.46 -17.82 -0.10 1.70 16 23 N -0.89 -25.46 13.29 55.43 0.74 -24.72 16 24 Si 0.90 21.54 29.54 -169.99 -5.02 16.52 16 25 H -0.27 -6.53 7.11 56.52 0.40 -6.12 16 26 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 27 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 28 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 29 H 0.07 1.24 7.07 -51.93 -0.37 0.88 16 30 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 31 H 0.13 1.99 7.09 -52.49 -0.37 1.62 16 32 H 0.40 5.57 8.76 -40.82 -0.36 5.21 16 33 H 0.09 0.56 8.14 -51.93 -0.42 0.13 16 34 H 0.09 0.66 8.07 -51.93 -0.42 0.24 16 35 H 0.08 0.47 8.14 -51.93 -0.42 0.04 16 36 H 0.08 0.63 8.14 -51.93 -0.42 0.21 16 37 H 0.13 0.91 8.06 -52.49 -0.42 0.48 16 38 H 0.13 1.18 8.06 -52.49 -0.42 0.75 16 39 H 0.14 1.96 7.45 -52.49 -0.39 1.57 16 40 H 0.05 1.40 8.14 -51.93 -0.42 0.98 16 41 H 0.05 1.30 7.04 -51.93 -0.37 0.94 16 42 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 LS Contribution 358.08 15.07 5.40 5.40 Total: -1.00 -31.89 358.08 -10.10 -41.99 By element: Atomic # 1 Polarization: 10.43 SS G_CDS: -5.57 Total: 4.86 kcal Atomic # 6 Polarization: -9.95 SS G_CDS: -5.59 Total: -15.53 kcal Atomic # 7 Polarization: -51.90 SS G_CDS: 0.64 Total: -51.27 kcal Atomic # 9 Polarization: -2.01 SS G_CDS: 0.04 Total: -1.97 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -31.89 -10.10 -41.99 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271029446.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.311 kcal (2) G-P(sol) polarization free energy of solvation -31.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.994 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds