Wall clock time and date at job start Tue Mar 31 2020 10:39:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.35255 * 126.06722 * 2 1 4 4 C 1.40434 * 107.86362 * 180.02562 * 3 2 1 5 5 N 1.39981 * 125.97687 * 179.97438 * 4 3 2 6 6 C 1.46503 * 120.00067 * 359.97438 * 5 4 3 7 7 H 1.09007 * 110.26724 * 324.37770 * 6 5 4 8 8 C 1.54341 * 110.38397 * 202.25217 * 6 5 4 9 9 C 1.54343 * 102.39331 * 214.67544 * 8 6 5 10 10 C 1.51379 * 105.17057 * 26.35471 * 9 8 6 11 11 C 1.38517 * 130.35980 * 162.80356 * 10 9 8 12 12 C 1.38064 * 120.25126 * 179.70673 * 11 10 9 13 13 C 1.38486 * 119.90496 * 0.54978 * 12 11 10 14 14 F 1.35104 * 120.05776 * 179.74841 * 13 12 11 15 15 C 1.38321 * 119.87988 * 359.47603 * 13 12 11 16 16 C 1.38235 * 109.75327 * 342.80992 * 10 9 8 17 17 N 1.31229 * 108.04232 * 0.23884 * 4 3 2 18 18 N 1.34958 * 126.07225 * 180.02562 * 2 1 3 19 19 C 1.46498 * 125.96973 * 359.94506 * 18 2 1 20 20 C 1.50704 * 109.47134 * 90.00080 * 19 18 2 21 21 H 1.07999 * 119.99844 * 359.97438 * 20 19 18 22 22 C 1.37876 * 119.99778 * 180.02562 * 20 19 18 23 23 N 1.31509 * 120.00667 * 359.97438 * 22 20 19 24 24 Si 1.86804 * 119.99657 * 179.97438 * 22 20 19 25 25 H 1.48497 * 109.47221 * 59.99903 * 24 22 20 26 26 H 1.48501 * 109.47134 * 179.97438 * 24 22 20 27 27 H 1.48498 * 109.46966 * 299.99713 * 24 22 20 28 28 H 1.09010 * 109.46952 * 89.97700 * 1 2 3 29 29 H 1.08999 * 109.47042 * 209.97413 * 1 2 3 30 30 H 1.09004 * 109.47467 * 329.97938 * 1 2 3 31 31 H 1.07992 * 126.06969 * 359.97438 * 3 2 1 32 32 H 0.97000 * 119.99948 * 180.02562 * 5 4 3 33 33 H 1.09000 * 110.82506 * 332.89964 * 8 6 5 34 34 H 1.09000 * 110.82374 * 96.25606 * 8 6 5 35 35 H 1.08997 * 110.30696 * 145.27752 * 9 8 6 36 36 H 1.08997 * 110.30468 * 267.43719 * 9 8 6 37 37 H 1.08001 * 119.87757 * 359.97438 * 11 10 9 38 38 H 1.08003 * 120.05032 * 180.27527 * 12 11 10 39 39 H 1.08002 * 119.90400 * 180.23061 * 15 13 12 40 40 H 1.09006 * 109.47346 * 209.99628 * 19 18 2 41 41 H 1.08999 * 109.47385 * 329.99954 * 19 18 2 42 42 H 0.97000 * 120.00483 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3032 1.0933 0.0000 4 6 3.6373 0.6546 -0.0006 5 7 4.7723 1.4738 -0.0013 6 6 4.6238 2.9313 -0.0020 7 1 3.7584 3.2224 -0.5976 8 6 5.9013 3.6016 -0.5506 9 6 5.9834 4.8945 0.2885 10 6 5.2648 4.5738 1.5816 11 6 5.2929 5.2187 2.8072 12 6 4.5387 4.7426 3.8612 13 6 3.7598 3.6095 3.6964 14 9 3.0246 3.1380 4.7272 15 6 3.7315 2.9646 2.4731 16 6 4.4835 3.4457 1.4147 17 7 3.6336 -0.6577 -0.0061 18 7 2.3016 -1.0908 -0.0005 19 6 1.8499 -2.4844 0.0000 20 6 1.6939 -2.9625 -1.4206 21 1 1.9093 -2.2948 -2.2417 22 6 1.2753 -4.2519 -1.6721 23 7 1.0125 -5.0648 -0.6722 24 14 1.0813 -4.8442 -3.4331 25 1 2.3866 -4.7476 -4.1345 26 1 0.6235 -6.2569 -3.4326 27 1 0.0800 -3.9992 -4.1320 28 1 -0.3633 0.0004 -1.0278 29 1 -0.3633 -0.8902 0.5134 30 1 -0.3634 0.8898 0.5142 31 1 1.9720 2.1212 -0.0004 32 1 5.6572 1.0765 -0.0021 33 1 6.7740 2.9717 -0.3781 34 1 5.7941 3.8304 -1.6109 35 1 7.0239 5.1508 0.4876 36 1 5.4836 5.7134 -0.2288 37 1 5.9037 6.0998 2.9376 38 1 4.5597 5.2506 4.8140 39 1 3.1213 2.0831 2.3431 40 1 2.5849 -3.1045 0.5133 41 1 0.8916 -2.5557 0.5146 42 1 0.7184 -5.9720 -0.8492 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271029449.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:39:34 Heat of formation + Delta-G solvation = 53.935988 kcal Electronic energy + Delta-G solvation = -25445.517806 eV Core-core repulsion = 21727.080850 eV Total energy + Delta-G solvation = -3718.436956 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -48.89037 -40.59362 -39.98622 -36.38235 -34.31181 -33.15230 -31.63446 -30.89262 -30.48854 -28.77296 -26.91192 -26.47526 -25.58041 -23.13555 -22.84409 -21.25510 -21.14286 -19.65135 -18.89496 -17.30615 -16.67622 -16.60519 -16.29465 -15.61984 -15.57746 -15.25360 -15.09243 -14.58855 -14.36550 -14.12524 -13.67924 -13.50486 -13.25984 -13.08562 -12.54557 -12.45899 -12.30162 -12.19488 -12.02378 -11.85950 -11.68687 -11.51828 -11.36521 -11.12685 -11.04563 -10.99460 -10.76116 -10.27188 -10.03100 -9.58753 -9.22630 -9.04914 -8.60679 -8.56908 -7.76674 -7.04020 -6.20915 -4.29072 1.00888 1.12080 2.88598 3.18584 3.24732 3.28684 3.33314 3.47974 3.71630 4.00334 4.17909 4.25920 4.35042 4.43370 4.73353 4.84846 4.90104 5.00505 5.07964 5.11807 5.40386 5.41737 5.45518 5.56198 5.61982 5.77109 5.78034 5.83522 5.96256 6.04851 6.07428 6.08790 6.11361 6.26767 6.34476 6.43092 6.71196 6.80022 6.87862 7.07820 7.20594 7.70382 7.71520 7.94445 8.12941 8.21019 8.76285 8.91929 9.36920 10.85536 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.020170 B = 0.003123 C = 0.002852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1387.839851 B = 8963.807267 C = 9817.035867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.108 3.892 3 C -0.337 4.337 4 C 0.311 3.689 5 N -0.718 5.718 6 C 0.211 3.789 7 H 0.096 0.904 8 C -0.124 4.124 9 C -0.077 4.077 10 C -0.108 4.108 11 C -0.085 4.085 12 C -0.154 4.154 13 C 0.093 3.907 14 F -0.140 7.140 15 C -0.118 4.118 16 C -0.079 4.079 17 N -0.346 5.346 18 N -0.324 5.324 19 C 0.260 3.740 20 C -0.534 4.534 21 H 0.063 0.937 22 C 0.065 3.935 23 N -0.893 5.893 24 Si 0.906 3.094 25 H -0.275 1.275 26 H -0.284 1.284 27 H -0.274 1.274 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.070 0.930 31 H 0.128 0.872 32 H 0.399 0.601 33 H 0.081 0.919 34 H 0.087 0.913 35 H 0.078 0.922 36 H 0.085 0.915 37 H 0.128 0.872 38 H 0.134 0.866 39 H 0.139 0.861 40 H 0.050 0.950 41 H 0.051 0.949 42 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.783 21.901 4.452 23.356 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.025 4.025 3 C -0.370 4.370 4 C 0.056 3.944 5 N -0.360 5.360 6 C 0.104 3.896 7 H 0.113 0.887 8 C -0.162 4.162 9 C -0.114 4.114 10 C -0.109 4.109 11 C -0.103 4.103 12 C -0.173 4.173 13 C 0.073 3.927 14 F -0.119 7.119 15 C -0.137 4.137 16 C -0.081 4.081 17 N -0.177 5.177 18 N -0.104 5.104 19 C 0.142 3.858 20 C -0.573 4.573 21 H 0.081 0.919 22 C -0.138 4.138 23 N -0.531 5.531 24 Si 0.733 3.267 25 H -0.200 1.200 26 H -0.210 1.210 27 H -0.200 1.200 28 H 0.095 0.905 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.146 0.854 32 H 0.234 0.766 33 H 0.099 0.901 34 H 0.105 0.895 35 H 0.097 0.903 36 H 0.103 0.897 37 H 0.146 0.854 38 H 0.151 0.849 39 H 0.157 0.843 40 H 0.068 0.932 41 H 0.069 0.931 42 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 7.231 20.567 4.519 22.264 hybrid contribution -0.472 -0.021 -0.564 0.736 sum 6.759 20.546 3.955 21.988 Atomic orbital electron populations 1.20350 0.88334 1.02731 1.03072 1.20849 0.94484 0.87423 0.99777 1.20424 0.90663 0.98080 1.27856 1.19070 0.87362 0.89617 0.98391 1.43392 1.04609 1.01931 1.86026 1.20206 0.98840 0.80094 0.90470 0.88660 1.22582 0.97388 0.96017 1.00209 1.20990 1.00436 0.98046 0.91913 1.20594 0.98886 0.96323 0.95117 1.20375 0.98915 0.99756 0.91268 1.20997 0.99016 0.96727 1.00543 1.17591 0.94770 0.95291 0.85003 1.91505 1.75182 1.88075 1.57125 1.20767 1.00901 1.01190 0.90866 1.21024 0.95322 0.95262 0.96521 1.77370 0.98890 1.08811 1.32678 1.48902 1.01369 1.07388 1.52760 1.19595 0.95763 0.71706 0.98697 1.21296 1.46571 0.97910 0.91482 0.91881 1.24927 0.94773 0.96109 0.98019 1.69909 1.45025 1.07113 1.31041 0.86427 0.78762 0.77658 0.83892 1.20013 1.20994 1.19982 0.90477 0.90875 0.91067 0.85408 0.76553 0.90072 0.89472 0.90302 0.89714 0.85406 0.84857 0.84293 0.93201 0.93131 0.92256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.44 10.11 36.00 0.36 -1.07 16 2 C 0.11 2.19 6.92 -82.28 -0.57 1.62 16 3 C -0.34 -6.24 8.92 -39.82 -0.36 -6.59 16 4 C 0.31 6.00 7.74 -154.55 -1.20 4.81 16 5 N -0.72 -10.66 5.32 -53.68 -0.29 -10.94 16 6 C 0.21 2.42 3.16 -68.05 -0.22 2.21 16 7 H 0.10 1.12 7.23 -51.93 -0.38 0.74 16 8 C -0.12 -1.00 6.76 -25.32 -0.17 -1.17 16 9 C -0.08 -0.54 6.77 -26.85 -0.18 -0.72 16 10 C -0.11 -1.05 6.14 -104.19 -0.64 -1.69 16 11 C -0.09 -0.77 10.04 -39.54 -0.40 -1.16 16 12 C -0.15 -1.58 10.03 -39.55 -0.40 -1.98 16 13 C 0.09 1.20 7.30 -39.46 -0.29 0.91 16 14 F -0.14 -1.98 17.27 2.25 0.04 -1.94 16 15 C -0.12 -1.63 9.91 -39.47 -0.39 -2.02 16 16 C -0.08 -0.95 5.79 -104.21 -0.60 -1.55 16 17 N -0.35 -8.08 12.59 31.41 0.40 -7.68 16 18 N -0.32 -7.69 3.59 -58.33 -0.21 -7.90 16 19 C 0.26 6.79 5.99 -5.19 -0.03 6.76 16 20 C -0.53 -14.89 9.39 -34.44 -0.32 -15.21 16 21 H 0.06 1.81 7.81 -52.49 -0.41 1.40 16 22 C 0.06 1.79 5.46 -17.82 -0.10 1.69 16 23 N -0.89 -25.43 13.29 55.43 0.74 -24.70 16 24 Si 0.91 21.28 29.54 -169.99 -5.02 16.26 16 25 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 26 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 27 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 28 H 0.08 1.24 8.14 -51.92 -0.42 0.82 16 29 H 0.07 1.26 7.07 -51.93 -0.37 0.89 16 30 H 0.07 0.96 8.14 -51.93 -0.42 0.53 16 31 H 0.13 2.04 7.47 -52.49 -0.39 1.64 16 32 H 0.40 5.60 8.52 -40.82 -0.35 5.25 16 33 H 0.08 0.64 7.81 -51.93 -0.41 0.23 16 34 H 0.09 0.60 8.14 -51.93 -0.42 0.17 16 35 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 36 H 0.08 0.49 8.14 -51.93 -0.42 0.07 16 37 H 0.13 0.80 8.06 -52.49 -0.42 0.37 16 38 H 0.13 1.08 8.06 -52.48 -0.42 0.66 16 39 H 0.14 2.21 6.73 -52.49 -0.35 1.85 16 40 H 0.05 1.40 8.14 -51.93 -0.42 0.98 16 41 H 0.05 1.31 7.04 -51.93 -0.37 0.94 16 42 H 0.27 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 356.30 15.07 5.37 5.37 Total: -1.00 -31.40 356.30 -10.00 -41.40 By element: Atomic # 1 Polarization: 10.84 SS G_CDS: -5.53 Total: 5.31 kcal Atomic # 6 Polarization: -9.68 SS G_CDS: -5.49 Total: -15.18 kcal Atomic # 7 Polarization: -51.86 SS G_CDS: 0.64 Total: -51.23 kcal Atomic # 9 Polarization: -1.98 SS G_CDS: 0.04 Total: -1.94 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -5.02 Total: 16.26 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -31.40 -10.00 -41.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271029449.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.339 kcal (2) G-P(sol) polarization free energy of solvation -31.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds