Wall clock time and date at job start Tue Mar 31 2020 11:30:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31005 * 1 3 3 C 1.50702 * 119.99429 * 2 1 4 4 N 1.46910 * 109.46811 * 124.14217 * 3 2 1 5 5 C 1.46893 * 110.99723 * 300.02454 * 4 3 2 6 6 C 1.50705 * 109.47595 * 288.16589 * 5 4 3 7 7 H 1.08005 * 119.99414 * 354.74444 * 6 5 4 8 8 C 1.37871 * 120.00143 * 174.73899 * 6 5 4 9 9 N 1.31516 * 120.00179 * 0.02562 * 8 6 5 10 10 Si 1.86803 * 119.99908 * 180.02562 * 8 6 5 11 11 H 1.48498 * 109.47186 * 359.97438 * 10 8 6 12 12 H 1.48496 * 109.47368 * 120.00384 * 10 8 6 13 13 H 1.48499 * 109.46870 * 240.00232 * 10 8 6 14 14 C 1.46898 * 111.00093 * 63.98121 * 4 3 2 15 15 C 1.50704 * 109.47193 * 66.04619 * 14 4 3 16 16 C 1.39902 * 125.88295 * 95.02106 * 15 14 4 17 17 C 1.35333 * 107.93326 * 179.75968 * 16 15 14 18 18 N 1.35202 * 107.71350 * 0.38952 * 17 16 15 19 19 C 1.40256 * 126.05206 * 179.87273 * 18 17 16 20 20 C 1.38792 * 120.07569 * 359.74187 * 19 18 17 21 21 C 1.38127 * 119.95822 * 179.97438 * 20 19 18 22 22 C 1.38293 * 120.11169 * 359.97438 * 21 20 19 23 23 C 1.38236 * 120.15597 * 0.02562 * 22 21 20 24 24 C 1.38343 * 120.04138 * 359.97438 * 23 22 21 25 25 F 1.35096 * 120.06040 * 179.97438 * 24 23 22 26 26 N 1.30892 * 125.87784 * 275.02627 * 15 14 4 27 27 H 1.08000 * 119.99418 * 180.02562 * 1 2 3 28 28 H 1.07991 * 120.00118 * 0.02562 * 1 2 3 29 29 H 1.08001 * 120.00365 * 179.97438 * 2 1 3 30 30 H 1.08997 * 109.47706 * 4.14256 * 3 2 1 31 31 H 1.09003 * 109.46915 * 244.13565 * 3 2 1 32 32 H 1.08998 * 109.47406 * 48.17386 * 5 4 3 33 33 H 1.09008 * 109.47020 * 168.16820 * 5 4 3 34 34 H 0.96996 * 120.00080 * 179.97438 * 9 8 6 35 35 H 1.08995 * 109.47390 * 306.04614 * 14 4 3 36 36 H 1.09004 * 109.46924 * 186.04491 * 14 4 3 37 37 H 1.08001 * 126.03073 * 0.02562 * 16 15 14 38 38 H 1.07996 * 126.14318 * 180.26660 * 17 16 15 39 39 H 1.08007 * 120.02167 * 359.97438 * 20 19 18 40 40 H 1.08002 * 119.94743 * 180.02562 * 21 20 19 41 41 H 1.08001 * 119.92069 * 180.27722 * 22 21 20 42 42 H 1.07999 * 119.98326 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0634 1.3052 0.0000 4 7 2.9815 1.3406 1.1464 5 6 2.2470 1.2201 2.4128 6 6 1.4916 2.4967 2.6790 7 1 1.6176 3.3454 2.0230 8 6 0.6398 2.5811 3.7598 9 7 0.4868 1.5477 4.5588 10 14 -0.2970 4.1633 4.0894 11 1 0.0487 5.1684 3.0523 12 1 -1.7564 3.8919 4.0495 13 1 0.0726 4.6875 5.4287 14 6 4.0078 0.2959 1.0314 15 6 4.8966 0.5925 -0.1489 16 6 6.1186 1.2723 -0.1049 17 6 6.6087 1.3302 -1.3650 18 7 5.7222 0.7156 -2.1800 19 6 5.8484 0.5582 -3.5680 20 6 6.9612 1.0621 -4.2268 21 6 7.0832 0.9052 -5.5937 22 6 6.0986 0.2464 -6.3071 23 6 4.9883 -0.2573 -5.6557 24 6 4.8595 -0.1038 -4.2868 25 9 3.7743 -0.5955 -3.6498 26 7 4.6580 0.2586 -1.3918 27 1 -0.5399 -0.9354 0.0004 28 1 -0.5400 0.9352 -0.0004 29 1 1.8501 -0.9353 0.0004 30 1 1.3575 2.1323 0.0742 31 1 2.6333 1.3957 -0.9248 32 1 1.5447 0.3891 2.3479 33 1 2.9508 1.0383 3.2251 34 1 -0.1122 1.6072 5.3194 35 1 3.5268 -0.6719 0.8899 36 1 4.6075 0.2741 1.9414 37 1 6.5898 1.6754 0.7793 38 1 7.5398 1.7873 -1.6659 39 1 7.7313 1.5765 -3.6710 40 1 7.9495 1.2970 -6.1061 41 1 6.1994 0.1216 -7.3751 42 1 4.2212 -0.7717 -6.2155 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292387126.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:15 Heat of formation + Delta-G solvation = 102.660052 kcal Electronic energy + Delta-G solvation = -25615.364391 eV Core-core repulsion = 21899.040269 eV Total energy + Delta-G solvation = -3716.324122 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.82546 -41.44263 -39.13400 -37.25656 -33.87974 -32.72993 -31.96793 -31.08686 -30.18461 -29.35169 -27.33141 -26.31043 -24.06283 -23.66217 -22.56186 -20.90704 -20.81570 -19.83773 -18.57384 -18.39046 -17.27479 -16.31554 -16.12177 -15.97300 -15.34474 -15.16639 -14.98762 -14.74281 -14.38572 -14.12784 -13.97682 -13.60164 -13.51758 -13.29428 -12.87473 -12.57919 -12.35432 -12.09547 -11.91688 -11.59153 -11.39105 -11.12089 -10.88948 -10.65523 -10.57342 -10.51124 -10.31882 -10.21049 -9.87357 -9.24803 -9.19140 -9.02351 -8.55219 -8.35496 -8.05766 -7.19440 -5.95852 -3.96094 0.51364 0.78051 2.09926 2.31316 2.89758 3.07170 3.29257 3.34812 3.42256 3.47643 3.86695 4.23007 4.43451 4.48747 4.62113 4.71853 4.84423 4.95255 5.16836 5.29008 5.38499 5.40636 5.64047 5.65767 5.69703 5.77340 5.79236 5.89383 5.96268 6.01525 6.10705 6.24901 6.32274 6.36820 6.57767 6.72765 6.84179 7.10077 7.26942 7.33350 7.44480 7.54711 7.78136 7.88075 8.13046 8.24831 8.59478 9.11878 9.67360 11.14783 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.021621 B = 0.003128 C = 0.002963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1294.735573 B = 8948.704433 C = 9446.496883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.169 4.169 3 C 0.090 3.910 4 N -0.523 5.523 5 C 0.190 3.810 6 C -0.499 4.499 7 H 0.062 0.938 8 C 0.056 3.944 9 N -0.898 5.898 10 Si 0.894 3.106 11 H -0.273 1.273 12 H -0.286 1.286 13 H -0.285 1.285 14 C 0.125 3.875 15 C 0.110 3.890 16 C -0.230 4.230 17 C 0.038 3.962 18 N -0.336 5.336 19 C 0.141 3.859 20 C -0.123 4.123 21 C -0.104 4.104 22 C -0.109 4.109 23 C -0.133 4.133 24 C 0.097 3.903 25 F -0.112 7.112 26 N -0.271 5.271 27 H 0.084 0.916 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.081 0.919 31 H 0.066 0.934 32 H 0.009 0.991 33 H 0.025 0.975 34 H 0.259 0.741 35 H 0.045 0.955 36 H 0.091 0.909 37 H 0.156 0.844 38 H 0.174 0.826 39 H 0.138 0.862 40 H 0.137 0.863 41 H 0.136 0.864 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.702 -3.320 -20.240 25.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.189 4.189 3 C -0.038 4.038 4 N -0.246 5.246 5 C 0.066 3.934 6 C -0.538 4.538 7 H 0.080 0.920 8 C -0.145 4.145 9 N -0.538 5.538 10 Si 0.722 3.278 11 H -0.197 1.197 12 H -0.212 1.212 13 H -0.211 1.211 14 C -0.005 4.005 15 C -0.059 4.059 16 C -0.258 4.258 17 C -0.102 4.102 18 N -0.111 5.111 19 C 0.046 3.954 20 C -0.144 4.144 21 C -0.123 4.123 22 C -0.128 4.128 23 C -0.153 4.153 24 C 0.075 3.925 25 F -0.090 7.090 26 N -0.091 5.091 27 H 0.102 0.898 28 H 0.114 0.886 29 H 0.113 0.887 30 H 0.099 0.901 31 H 0.084 0.916 32 H 0.027 0.973 33 H 0.043 0.957 34 H 0.069 0.931 35 H 0.063 0.937 36 H 0.109 0.891 37 H 0.174 0.826 38 H 0.192 0.808 39 H 0.156 0.844 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 14.034 -3.488 -20.859 25.381 hybrid contribution -0.566 0.337 1.022 1.216 sum 13.468 -3.151 -19.836 24.183 Atomic orbital electron populations 1.23644 0.96014 1.00937 1.01654 1.23468 0.96530 0.99759 0.99161 1.21256 0.94570 0.94271 0.93730 1.62414 1.14041 1.43578 1.04601 1.19805 0.92290 0.97410 0.83916 1.21145 1.23606 0.98481 1.10532 0.91979 1.24949 0.96934 0.96422 0.96216 1.69966 1.38042 1.29689 1.16142 0.86501 0.79515 0.83686 0.78090 1.19710 1.21198 1.21106 1.20533 0.93104 0.94861 0.92043 1.22740 0.94905 0.95140 0.93114 1.21562 0.98084 1.08760 0.97436 1.22485 0.96829 1.00231 0.90650 1.45776 1.17081 1.44277 1.03997 1.17680 0.96316 1.01150 0.80246 1.20742 0.96464 1.01965 0.95188 1.20995 0.99555 0.98977 0.92773 1.21034 0.93259 0.98006 1.00525 1.21145 1.00226 1.02160 0.91736 1.17368 0.85257 0.99355 0.90525 1.91632 1.50773 1.84828 1.81796 1.77768 1.06373 1.22380 1.02539 0.89792 0.88646 0.88653 0.90092 0.91566 0.97343 0.95725 0.93111 0.93699 0.89120 0.82636 0.80840 0.84386 0.84503 0.84607 0.83976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.61 14.32 29.01 0.42 -3.19 16 2 C -0.17 -3.45 7.42 -36.03 -0.27 -3.72 16 3 C 0.09 1.92 5.49 -4.97 -0.03 1.89 16 4 N -0.52 -11.62 4.65 -238.95 -1.11 -12.73 16 5 C 0.19 4.96 4.59 -4.98 -0.02 4.93 16 6 C -0.50 -14.10 8.52 -34.44 -0.29 -14.39 16 7 H 0.06 1.77 7.66 -52.48 -0.40 1.37 16 8 C 0.06 1.59 5.46 -17.82 -0.10 1.49 16 9 N -0.90 -26.80 13.29 55.43 0.74 -26.06 16 10 Si 0.89 21.94 29.54 -169.99 -5.02 16.92 16 11 H -0.27 -6.59 7.11 56.52 0.40 -6.19 16 12 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 13 H -0.28 -6.92 7.11 56.52 0.40 -6.52 16 14 C 0.12 2.37 5.36 -4.97 -0.03 2.34 16 15 C 0.11 1.93 5.98 -82.37 -0.49 1.43 16 16 C -0.23 -3.36 10.74 -39.99 -0.43 -3.79 16 17 C 0.04 0.48 10.80 -17.10 -0.18 0.30 16 18 N -0.34 -5.01 3.80 -10.65 -0.04 -5.05 16 19 C 0.14 1.78 6.70 -83.50 -0.56 1.22 16 20 C -0.12 -1.06 9.45 -39.42 -0.37 -1.44 16 21 C -0.10 -0.69 10.04 -39.60 -0.40 -1.09 16 22 C -0.11 -0.74 10.04 -39.56 -0.40 -1.14 16 23 C -0.13 -1.23 10.02 -39.54 -0.40 -1.62 16 24 C 0.10 1.25 7.29 -39.25 -0.29 0.97 16 25 F -0.11 -1.81 15.54 2.25 0.03 -1.77 16 26 N -0.27 -4.87 9.67 33.69 0.33 -4.54 16 27 H 0.08 1.47 8.06 -52.49 -0.42 1.05 16 28 H 0.10 1.89 7.84 -52.49 -0.41 1.48 16 29 H 0.10 1.90 6.79 -52.49 -0.36 1.54 16 30 H 0.08 1.85 7.03 -51.93 -0.37 1.49 16 31 H 0.07 1.40 6.32 -51.93 -0.33 1.07 16 32 H 0.01 0.24 6.72 -51.93 -0.35 -0.11 16 33 H 0.02 0.67 7.81 -51.92 -0.41 0.27 16 34 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 35 H 0.05 0.86 6.33 -51.93 -0.33 0.53 16 36 H 0.09 1.61 7.86 -51.93 -0.41 1.20 16 37 H 0.16 1.96 8.06 -52.49 -0.42 1.54 16 38 H 0.17 1.38 7.04 -52.49 -0.37 1.01 16 39 H 0.14 0.87 6.74 -52.48 -0.35 0.52 16 40 H 0.14 0.50 8.06 -52.49 -0.42 0.07 16 41 H 0.14 0.53 8.06 -52.49 -0.42 0.11 16 42 H 0.14 1.04 8.06 -52.49 -0.42 0.61 16 LS Contribution 356.76 15.07 5.38 5.38 Total: -1.00 -33.35 356.76 -8.86 -42.21 By element: Atomic # 1 Polarization: 6.80 SS G_CDS: -5.33 Total: 1.47 kcal Atomic # 6 Polarization: -11.97 SS G_CDS: -3.84 Total: -15.81 kcal Atomic # 7 Polarization: -48.30 SS G_CDS: -0.09 Total: -48.39 kcal Atomic # 9 Polarization: -1.81 SS G_CDS: 0.03 Total: -1.77 kcal Atomic # 14 Polarization: 21.94 SS G_CDS: -5.02 Total: 16.92 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -33.35 -8.86 -42.21 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292387126.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.870 kcal (2) G-P(sol) polarization free energy of solvation -33.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.522 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.210 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds