Wall clock time and date at job start Tue Mar 31 2020 11:30:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53000 * 109.47081 * 2 1 4 4 N 1.46501 * 109.47598 * 120.00270 * 2 1 3 5 5 C 1.46490 * 120.00121 * 121.41205 * 4 2 1 6 6 C 1.50701 * 109.47608 * 270.00505 * 5 4 2 7 7 H 1.08001 * 119.99735 * 359.97438 * 6 5 4 8 8 C 1.37878 * 120.00212 * 180.02562 * 6 5 4 9 9 N 1.31516 * 119.99944 * 180.02562 * 8 6 5 10 10 Si 1.86798 * 119.99944 * 359.97438 * 8 6 5 11 11 H 1.48505 * 109.47009 * 90.00425 * 10 8 6 12 12 H 1.48506 * 109.47267 * 209.99992 * 10 8 6 13 13 H 1.48503 * 109.47344 * 330.00338 * 10 8 6 14 14 C 1.34778 * 119.99485 * 301.42052 * 4 2 1 15 15 O 1.21576 * 119.99442 * 212.60143 * 14 4 2 16 16 C 1.47697 * 120.00499 * 32.60512 * 14 4 2 17 17 C 1.39680 * 120.07944 * 137.38360 * 16 14 4 18 18 C 1.37750 * 119.92063 * 180.02562 * 17 16 14 19 19 C 1.39018 * 120.07492 * 359.97438 * 18 17 16 20 20 N 1.39975 * 119.91556 * 179.97438 * 19 18 17 21 21 C 1.35136 * 127.39531 * 179.71027 * 20 19 18 22 22 N 1.30710 * 107.26587 * 179.83978 * 21 20 19 23 23 N 1.28413 * 110.65660 * 0.44668 * 22 21 20 24 24 N 1.28947 * 110.21791 * 359.71770 * 23 22 21 25 25 C 1.39015 * 120.16354 * 0.26108 * 19 18 17 26 26 C 1.37748 * 120.08094 * 359.48121 * 25 19 18 27 27 H 1.08996 * 109.46890 * 253.42803 * 1 2 3 28 28 H 1.09003 * 109.47609 * 13.43089 * 1 2 3 29 29 H 1.09006 * 109.47160 * 133.42887 * 1 2 3 30 30 H 1.09004 * 109.47411 * 240.00386 * 2 1 3 31 31 H 1.08998 * 109.47664 * 223.89641 * 3 2 1 32 32 H 1.09001 * 109.47400 * 343.90751 * 3 2 1 33 33 H 1.08999 * 109.47125 * 103.89900 * 3 2 1 34 34 H 1.09000 * 109.47296 * 30.00652 * 5 4 2 35 35 H 1.09001 * 109.47113 * 149.99895 * 5 4 2 36 36 H 0.96996 * 119.99902 * 179.97438 * 9 8 6 37 37 H 1.08003 * 120.04380 * 0.02562 * 17 16 14 38 38 H 1.08004 * 119.96385 * 180.02562 * 18 17 16 39 39 H 1.08003 * 126.36327 * 359.96230 * 21 20 19 40 40 H 1.08001 * 119.95784 * 179.72344 * 25 19 18 41 41 H 1.07994 * 120.04384 * 180.23492 * 26 25 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 2.8860 -1.8633 1.0618 6 6 2.0404 -3.1090 0.9955 7 1 0.9642 -3.0345 1.0485 8 6 2.6406 -4.3437 0.8682 9 7 1.9025 -5.4307 0.8098 10 14 4.5019 -4.4725 0.7772 11 1 5.0553 -4.6212 2.1472 12 1 4.8770 -5.6550 -0.0392 13 1 5.0531 -3.2438 0.1513 14 6 1.6693 -0.2471 2.4200 15 8 2.4424 -0.3616 3.3513 16 6 0.3477 0.3779 2.6299 17 6 -0.4041 0.0617 3.7639 18 6 -1.6366 0.6462 3.9561 19 6 -2.1320 1.5502 3.0234 20 7 -3.3850 2.1417 3.2219 21 6 -4.0058 3.0370 2.4223 22 7 -5.1536 3.3232 2.9783 23 7 -5.2973 2.6776 4.0789 24 7 -4.2652 1.9365 4.2989 25 6 -1.3887 1.8636 1.8913 26 6 -0.1532 1.2870 1.6951 27 1 -0.3633 -0.2931 0.9850 28 1 -0.3634 0.9996 -0.2387 29 1 -0.3634 -0.7065 -0.7464 30 1 1.8933 -0.5138 -0.8900 31 1 2.8592 1.5383 -0.7125 32 1 1.2301 2.1142 -0.2849 33 1 2.3938 1.7028 0.9976 34 1 3.4764 -1.7760 0.1498 35 1 3.5529 -1.9223 1.9220 36 1 2.3248 -6.2993 0.7198 37 1 -0.0196 -0.6402 4.4891 38 1 -2.2183 0.4025 4.8329 39 1 -3.6251 3.4395 1.4952 40 1 -1.7788 2.5629 1.1666 41 1 0.4254 1.5338 0.8172 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000523701762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:39 Heat of formation + Delta-G solvation = 205.003012 kcal Electronic energy + Delta-G solvation = -26263.208113 eV Core-core repulsion = 22571.241876 eV Total energy + Delta-G solvation = -3691.966236 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -43.47494 -41.34512 -38.64138 -36.85464 -35.28924 -33.45088 -32.64841 -32.07972 -30.84078 -30.46382 -27.96524 -27.15622 -25.65941 -24.29164 -23.30602 -22.61092 -21.88107 -21.58064 -19.05409 -18.82322 -17.08513 -16.88263 -16.73280 -16.58075 -16.13320 -15.59817 -15.18769 -14.89452 -14.46864 -14.26088 -14.02557 -13.63311 -13.51008 -13.31044 -12.99434 -12.81241 -12.64576 -12.45956 -12.39420 -12.12605 -11.67112 -11.51303 -11.38008 -11.31717 -11.00296 -10.96713 -10.79765 -10.64380 -10.42966 -10.28188 -9.70227 -9.49835 -9.13952 -8.72392 -8.45887 -7.84318 -6.22165 -4.23300 -0.03708 1.07281 1.24651 1.47889 1.97219 2.81932 3.19833 3.26017 3.28498 3.39218 3.62733 3.73077 3.93216 4.27793 4.44120 4.52895 4.56656 4.62715 4.72585 4.92595 5.03041 5.05886 5.09688 5.11633 5.28626 5.34027 5.45432 5.54795 5.60183 5.63981 5.79269 5.85529 5.97276 6.07594 6.12729 6.16199 6.33478 6.50088 6.59125 6.78415 7.21071 7.44579 7.99715 8.09728 8.30633 8.53026 8.80820 9.37308 10.90496 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.021907 B = 0.003389 C = 0.003242 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1277.833493 B = 8260.322709 C = 8634.637714 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.135 3.865 3 C -0.183 4.183 4 N -0.602 5.602 5 C 0.219 3.781 6 C -0.540 4.540 7 H 0.076 0.924 8 C 0.075 3.925 9 N -0.893 5.893 10 Si 0.875 3.125 11 H -0.273 1.273 12 H -0.284 1.284 13 H -0.265 1.265 14 C 0.573 3.427 15 O -0.524 6.524 16 C -0.131 4.131 17 C -0.039 4.039 18 C -0.121 4.121 19 C 0.145 3.855 20 N -0.321 5.321 21 C 0.225 3.775 22 N -0.333 5.333 23 N -0.039 5.039 24 N -0.074 5.074 25 C -0.164 4.164 26 C -0.065 4.065 27 H 0.094 0.906 28 H 0.070 0.930 29 H 0.065 0.935 30 H 0.101 0.899 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.066 0.934 34 H 0.032 0.968 35 H 0.039 0.961 36 H 0.266 0.734 37 H 0.146 0.854 38 H 0.144 0.856 39 H 0.240 0.760 40 H 0.137 0.863 41 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.153 17.291 -2.962 18.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.259 4.259 2 C 0.030 3.970 3 C -0.240 4.240 4 N -0.334 5.334 5 C 0.099 3.901 6 C -0.579 4.579 7 H 0.094 0.906 8 C -0.128 4.128 9 N -0.531 5.531 10 Si 0.701 3.299 11 H -0.198 1.198 12 H -0.210 1.210 13 H -0.189 1.189 14 C 0.361 3.639 15 O -0.400 6.400 16 C -0.136 4.136 17 C -0.058 4.058 18 C -0.142 4.142 19 C 0.052 3.948 20 N -0.110 5.110 21 C -0.072 4.072 22 N -0.182 5.182 23 N -0.034 5.034 24 N -0.059 5.059 25 C -0.185 4.185 26 C -0.083 4.083 27 H 0.112 0.888 28 H 0.089 0.911 29 H 0.084 0.916 30 H 0.119 0.881 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.085 0.915 34 H 0.050 0.950 35 H 0.057 0.943 36 H 0.076 0.924 37 H 0.163 0.837 38 H 0.162 0.838 39 H 0.255 0.745 40 H 0.155 0.845 41 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges -5.770 16.925 -1.471 17.942 hybrid contribution 1.508 -0.525 -0.801 1.786 sum -4.262 16.401 -2.272 17.097 Atomic orbital electron populations 1.23724 0.96086 1.01552 1.04499 1.21076 0.93689 0.92295 0.89946 1.22749 1.01796 0.96005 1.03453 1.47725 1.51348 1.30910 1.03451 1.19756 0.90238 0.82492 0.97650 1.21382 0.95380 0.89249 1.51873 0.90551 1.24850 0.98185 0.95519 0.94253 1.69887 1.35600 0.98166 1.49406 0.86874 0.85984 0.78129 0.78889 1.19815 1.20971 1.18927 1.17885 0.85213 0.77566 0.83274 1.90739 1.51477 1.54937 1.42870 1.20497 0.97095 0.99784 0.96196 1.21148 0.92085 0.97033 0.95529 1.20808 0.96804 0.96945 0.99606 1.17708 0.81729 0.97651 0.97670 1.49067 1.15203 1.30093 1.16685 1.27445 0.89959 0.90640 0.99114 1.74462 1.16212 1.22935 1.04589 1.78081 1.14608 1.02363 1.08337 1.82700 0.96784 1.20023 1.06428 1.20608 0.96075 1.04563 0.97227 1.22930 0.95476 0.91924 0.97971 0.88781 0.91127 0.91602 0.88076 0.91121 0.91039 0.91509 0.94976 0.94311 0.92382 0.83653 0.83839 0.74451 0.84528 0.79526 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.35 7.72 37.15 0.29 -2.06 16 2 C 0.13 1.80 3.27 -67.93 -0.22 1.58 16 3 C -0.18 -1.77 8.36 37.16 0.31 -1.46 16 4 N -0.60 -11.09 2.38 -168.64 -0.40 -11.49 16 5 C 0.22 4.91 4.39 -5.20 -0.02 4.89 16 6 C -0.54 -14.34 9.94 -34.44 -0.34 -14.69 16 7 H 0.08 2.21 8.06 -52.49 -0.42 1.79 16 8 C 0.08 2.07 5.47 -17.82 -0.10 1.97 16 9 N -0.89 -26.17 13.96 55.43 0.77 -25.39 16 10 Si 0.87 20.40 27.47 -169.99 -4.67 15.73 16 11 H -0.27 -6.43 7.11 56.52 0.40 -6.02 16 12 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 13 H -0.26 -5.79 6.54 56.52 0.37 -5.42 16 14 C 0.57 10.66 5.85 -12.40 -0.07 10.59 16 15 O -0.52 -11.58 16.80 5.30 0.09 -11.49 16 16 C -0.13 -1.90 4.27 -104.95 -0.45 -2.34 16 17 C -0.04 -0.53 9.65 -39.22 -0.38 -0.91 16 18 C -0.12 -1.45 9.68 -39.47 -0.38 -1.84 16 19 C 0.14 1.54 6.71 -83.56 -0.56 0.98 16 20 N -0.32 -3.48 3.85 -11.71 -0.05 -3.52 16 21 C 0.23 1.92 12.15 -90.12 -1.09 0.83 16 22 N -0.33 -3.94 12.15 29.65 0.36 -3.58 16 23 N -0.04 -0.54 13.39 60.35 0.81 0.27 16 24 N -0.07 -0.99 13.31 60.35 0.80 -0.19 16 25 C -0.16 -1.39 9.20 -39.47 -0.36 -1.75 16 26 C -0.07 -0.68 4.88 -39.22 -0.19 -0.87 16 27 H 0.09 1.30 4.00 -61.16 -0.24 1.05 16 28 H 0.07 0.54 5.23 -51.93 -0.27 0.27 16 29 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 30 H 0.10 1.38 7.81 -51.93 -0.41 0.97 16 31 H 0.07 0.62 8.14 -51.93 -0.42 0.20 16 32 H 0.07 0.45 6.17 -51.93 -0.32 0.13 16 33 H 0.07 0.75 6.82 -51.93 -0.35 0.39 16 34 H 0.03 0.69 6.99 -51.93 -0.36 0.32 16 35 H 0.04 0.94 6.79 -51.93 -0.35 0.59 16 36 H 0.27 7.32 8.31 -40.82 -0.34 6.98 16 37 H 0.15 2.05 8.06 -52.48 -0.42 1.63 16 38 H 0.14 1.63 7.75 -52.48 -0.41 1.22 16 39 H 0.24 0.66 7.17 -52.48 -0.38 0.29 16 40 H 0.14 0.59 6.86 -52.49 -0.36 0.23 16 41 H 0.19 1.66 1.06 -53.70 -0.06 1.60 16 LS Contribution 332.95 15.07 5.02 5.02 Total: -1.00 -34.07 332.95 -5.21 -39.28 By element: Atomic # 1 Polarization: 4.82 SS G_CDS: -4.37 Total: 0.45 kcal Atomic # 6 Polarization: -1.52 SS G_CDS: -3.58 Total: -5.09 kcal Atomic # 7 Polarization: -46.20 SS G_CDS: 2.30 Total: -43.90 kcal Atomic # 8 Polarization: -11.58 SS G_CDS: 0.09 Total: -11.49 kcal Atomic # 14 Polarization: 20.40 SS G_CDS: -4.67 Total: 15.73 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -34.07 -5.21 -39.28 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000523701762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 244.283 kcal (2) G-P(sol) polarization free energy of solvation -34.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 210.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.280 kcal (6) G-S(sol) free energy of system = (1) + (5) 205.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds