Wall clock time and date at job start Tue Mar 31 2020 11:30:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52990 * 109.47371 * 2 1 4 4 N 1.46500 * 109.46974 * 120.00397 * 2 1 3 5 5 C 1.46505 * 119.99621 * 295.04432 * 4 2 1 6 6 C 1.50696 * 109.47362 * 275.55349 * 5 4 2 7 7 H 1.08001 * 120.00083 * 359.97438 * 6 5 4 8 8 C 1.37875 * 120.00037 * 180.02562 * 6 5 4 9 9 N 1.31515 * 120.00121 * 359.97438 * 8 6 5 10 10 Si 1.86803 * 120.00039 * 179.97438 * 8 6 5 11 11 H 1.48498 * 109.47023 * 90.00139 * 10 8 6 12 12 H 1.48507 * 109.46844 * 210.00118 * 10 8 6 13 13 H 1.48503 * 109.46791 * 329.99841 * 10 8 6 14 14 C 1.34771 * 120.00490 * 115.04969 * 4 2 1 15 15 O 1.21517 * 119.99837 * 4.83304 * 14 4 2 16 16 C 1.48158 * 120.00266 * 184.83117 * 14 4 2 17 17 C 1.39945 * 120.89224 * 311.88971 * 16 14 4 18 18 C 1.38054 * 119.13304 * 180.02562 * 17 16 14 19 19 N 1.31841 * 120.98643 * 0.02562 * 18 17 16 20 20 C 1.32233 * 121.96974 * 359.97438 * 19 18 17 21 21 N 1.39867 * 119.62225 * 179.97438 * 20 19 18 22 22 C 1.34806 * 126.84652 * 0.02562 * 21 20 19 23 23 N 1.30815 * 108.01816 * 179.97438 * 22 21 20 24 24 C 1.33292 * 109.84956 * 359.97438 * 23 22 21 25 25 N 1.30718 * 109.01558 * 359.74065 * 24 23 22 26 26 C 1.38901 * 120.75398 * 0.02562 * 20 19 18 27 27 H 1.09000 * 109.47229 * 300.00375 * 1 2 3 28 28 H 1.08998 * 109.47092 * 59.99910 * 1 2 3 29 29 H 1.08995 * 109.47396 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46753 * 239.99395 * 2 1 3 31 31 H 1.09000 * 109.47093 * 180.02562 * 3 2 1 32 32 H 1.08998 * 109.47086 * 300.00093 * 3 2 1 33 33 H 1.08999 * 109.47676 * 59.99960 * 3 2 1 34 34 H 1.09001 * 109.47011 * 35.55786 * 5 4 2 35 35 H 1.08999 * 109.46764 * 155.54894 * 5 4 2 36 36 H 0.97004 * 120.00059 * 179.97438 * 9 8 6 37 37 H 1.08005 * 120.43089 * 0.04757 * 17 16 14 38 38 H 1.08004 * 119.50774 * 179.72731 * 18 17 16 39 39 H 1.07999 * 125.98826 * 359.95217 * 22 21 20 40 40 H 1.07995 * 125.49731 * 180.02562 * 24 23 22 41 41 H 1.07995 * 120.53274 * 180.02562 * 26 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 7 2.0183 -0.6907 1.1961 5 6 1.7560 -0.1301 2.5240 6 6 2.8068 0.8993 2.8512 7 1 3.5919 1.1142 2.1413 8 6 2.7667 1.5661 4.0574 9 7 1.8111 1.3041 4.9221 10 14 4.0697 2.8416 4.4633 11 1 3.6192 4.1763 3.9934 12 1 4.2838 2.8803 5.9323 13 1 5.3419 2.4821 3.7869 14 6 2.7088 -1.8417 1.0750 15 8 3.0025 -2.2610 -0.0271 16 6 3.1099 -2.5959 2.2856 17 6 3.7230 -1.9492 3.3647 18 6 4.0822 -2.6875 4.4746 19 7 3.8565 -3.9853 4.5287 20 6 3.2802 -4.6378 3.5334 21 7 3.0647 -6.0154 3.6429 22 6 3.3860 -6.8034 4.6884 23 7 3.0202 -8.0260 4.4011 24 6 2.4649 -8.0595 3.1899 25 7 2.4640 -6.8524 2.6882 26 6 2.8875 -3.9709 2.3800 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 1.8933 -0.5139 -0.8899 31 1 3.1300 1.4423 -0.0005 32 1 1.6767 1.9562 -0.8900 33 1 1.6768 1.9563 0.8899 34 1 0.7724 0.3395 2.5323 35 1 1.7844 -0.9271 3.2669 36 1 1.7831 1.7730 5.7709 37 1 3.9122 -0.8865 3.3298 38 1 4.5597 -2.1954 5.3090 39 1 3.8622 -6.4816 5.6028 40 1 2.0742 -8.9409 2.7033 41 1 2.4168 -4.5073 1.5694 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000608814912.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:53 Heat of formation + Delta-G solvation = 104.735538 kcal Electronic energy + Delta-G solvation = -26270.927899 eV Core-core repulsion = 22574.613738 eV Total energy + Delta-G solvation = -3696.314160 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.34501 -40.41565 -38.92534 -36.02883 -34.34268 -33.29775 -32.60200 -31.41880 -31.03918 -29.71800 -27.62832 -26.65007 -24.95939 -24.21876 -23.21592 -22.44926 -21.57512 -20.85569 -19.08186 -17.86672 -16.93143 -16.80854 -16.08318 -15.97954 -15.62739 -15.49511 -15.07571 -14.61608 -14.31692 -14.20334 -13.97642 -13.71878 -13.53642 -13.07768 -12.61661 -12.48790 -12.26208 -12.00135 -11.86930 -11.60281 -11.39915 -11.15801 -11.04056 -10.88752 -10.75918 -10.48410 -10.24678 -10.09233 -9.96859 -9.96016 -9.82415 -9.66141 -9.19554 -8.76675 -8.42563 -7.94432 -6.38057 -4.46423 0.67087 1.07165 1.92830 1.95044 2.81672 3.09473 3.13902 3.19060 3.21770 3.53688 3.95925 4.14915 4.18722 4.35623 4.50094 4.91103 4.91573 5.04900 5.11604 5.28132 5.39616 5.57074 5.62113 5.73225 5.79079 5.86383 6.04076 6.09122 6.17914 6.26421 6.27934 6.35407 6.42748 6.58549 6.61670 6.66273 6.96125 6.96696 7.04838 7.33784 7.55919 7.66188 7.83530 8.02455 8.09082 8.55248 8.72019 9.20245 10.67341 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.014069 B = 0.004430 C = 0.003613 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1989.710553 B = 6318.799980 C = 7748.309530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.137 3.863 3 C -0.153 4.153 4 N -0.578 5.578 5 C 0.227 3.773 6 C -0.543 4.543 7 H 0.068 0.932 8 C 0.071 3.929 9 N -0.880 5.880 10 Si 0.891 3.109 11 H -0.278 1.278 12 H -0.283 1.283 13 H -0.270 1.270 14 C 0.558 3.442 15 O -0.559 6.559 16 C -0.055 4.055 17 C -0.118 4.118 18 C 0.123 3.877 19 N -0.493 5.493 20 C 0.332 3.668 21 N -0.322 5.322 22 C 0.287 3.713 23 N -0.547 5.547 24 C 0.205 3.795 25 N -0.308 5.308 26 C -0.111 4.111 27 H 0.064 0.936 28 H 0.060 0.940 29 H 0.050 0.950 30 H 0.087 0.913 31 H 0.055 0.945 32 H 0.048 0.952 33 H 0.081 0.919 34 H 0.040 0.960 35 H 0.042 0.958 36 H 0.268 0.732 37 H 0.189 0.811 38 H 0.174 0.826 39 H 0.226 0.774 40 H 0.224 0.776 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.783 -6.893 -1.401 7.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.034 3.966 3 C -0.210 4.210 4 N -0.307 5.307 5 C 0.108 3.892 6 C -0.581 4.581 7 H 0.086 0.914 8 C -0.134 4.134 9 N -0.517 5.517 10 Si 0.718 3.282 11 H -0.204 1.204 12 H -0.209 1.209 13 H -0.195 1.195 14 C 0.344 3.656 15 O -0.440 6.440 16 C -0.066 4.066 17 C -0.138 4.138 18 C -0.034 4.034 19 N -0.206 5.206 20 C 0.105 3.895 21 N -0.107 5.107 22 C -0.009 4.009 23 N -0.273 5.273 24 C -0.098 4.098 25 N -0.134 5.134 26 C -0.134 4.134 27 H 0.083 0.917 28 H 0.079 0.921 29 H 0.070 0.930 30 H 0.105 0.895 31 H 0.074 0.926 32 H 0.067 0.933 33 H 0.100 0.900 34 H 0.058 0.942 35 H 0.060 0.940 36 H 0.078 0.922 37 H 0.206 0.794 38 H 0.191 0.809 39 H 0.243 0.757 40 H 0.240 0.760 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.816 -7.574 -1.549 7.774 hybrid contribution 0.390 1.376 -0.029 1.431 sum 1.206 -6.198 -1.578 6.509 Atomic orbital electron populations 1.22129 0.95633 1.01679 1.02270 1.20916 0.93525 0.93790 0.88390 1.22129 1.01497 0.95212 1.02212 1.48238 1.51602 1.21136 1.09755 1.19660 0.97830 0.94577 0.77180 1.21477 1.12124 1.22166 1.02347 0.91382 1.24955 0.95863 0.96666 0.95955 1.69926 1.31823 1.41353 1.08582 0.86590 0.81873 0.81919 0.77799 1.20375 1.20893 1.19504 1.18062 0.78641 0.81307 0.87557 1.90713 1.56630 1.69847 1.26766 1.20261 0.98019 0.92832 0.95507 1.23558 0.93866 1.05112 0.91267 1.22524 0.96440 0.86381 0.98096 1.66603 1.14167 1.11869 1.27982 1.17358 0.99256 0.80705 0.92166 1.47429 1.43670 1.05976 1.13632 1.26346 0.95057 0.85315 0.94156 1.70689 1.20457 1.20003 1.16177 1.26202 0.97096 0.95786 0.90710 1.78203 1.19897 1.02149 1.13177 1.21521 1.00731 0.93527 0.97607 0.91667 0.92075 0.93039 0.89485 0.92595 0.93288 0.89992 0.94226 0.93984 0.92208 0.79434 0.80928 0.75739 0.76016 0.83387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.42 9.25 37.16 0.34 -2.08 16 2 C 0.14 2.39 3.25 -67.94 -0.22 2.17 16 3 C -0.15 -2.53 8.13 37.15 0.30 -2.23 16 4 N -0.58 -11.32 2.42 -168.47 -0.41 -11.72 16 5 C 0.23 4.81 4.16 -5.19 -0.02 4.79 16 6 C -0.54 -12.01 4.98 -34.44 -0.17 -12.18 16 7 H 0.07 1.54 6.94 -52.49 -0.36 1.17 16 8 C 0.07 1.62 5.46 -17.82 -0.10 1.52 16 9 N -0.88 -21.52 13.29 55.43 0.74 -20.79 16 10 Si 0.89 18.19 29.54 -169.99 -5.02 13.17 16 11 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 12 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 13 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 14 C 0.56 11.32 7.30 -12.19 -0.09 11.23 16 15 O -0.56 -12.43 16.38 5.35 0.09 -12.34 16 16 C -0.05 -1.02 4.97 -104.67 -0.52 -1.54 16 17 C -0.12 -2.08 7.64 -39.01 -0.30 -2.38 16 18 C 0.12 1.90 11.17 -17.61 -0.20 1.70 16 19 N -0.49 -7.74 9.87 -12.33 -0.12 -7.86 16 20 C 0.33 5.52 7.56 -154.40 -1.17 4.35 16 21 N -0.32 -4.99 3.81 -13.36 -0.05 -5.04 16 22 C 0.29 3.82 12.26 -90.33 -1.11 2.71 16 23 N -0.55 -7.37 11.19 -15.74 -0.18 -7.54 16 24 C 0.20 2.56 13.03 -91.76 -1.20 1.37 16 25 N -0.31 -4.69 12.02 29.30 0.35 -4.33 16 26 C -0.11 -1.96 9.45 -38.82 -0.37 -2.33 16 27 H 0.06 1.05 6.87 -51.93 -0.36 0.69 16 28 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 30 H 0.09 1.56 6.91 -51.93 -0.36 1.20 16 31 H 0.05 0.97 7.68 -51.93 -0.40 0.58 16 32 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 33 H 0.08 1.50 6.68 -51.93 -0.35 1.16 16 34 H 0.04 0.90 6.71 -51.93 -0.35 0.55 16 35 H 0.04 0.94 5.43 -51.93 -0.28 0.66 16 36 H 0.27 6.33 8.31 -40.82 -0.34 5.99 16 37 H 0.19 3.59 4.83 -52.48 -0.25 3.34 16 38 H 0.17 2.17 8.06 -52.48 -0.42 1.75 16 39 H 0.23 2.30 8.06 -52.49 -0.42 1.87 16 40 H 0.22 1.77 8.06 -52.49 -0.42 1.35 16 41 H 0.15 2.65 7.73 -52.49 -0.41 2.24 16 LS Contribution 345.09 15.07 5.20 5.20 Total: -1.00 -27.54 345.09 -8.99 -36.54 By element: Atomic # 1 Polarization: 12.41 SS G_CDS: -4.79 Total: 7.62 kcal Atomic # 6 Polarization: 11.91 SS G_CDS: -4.81 Total: 7.10 kcal Atomic # 7 Polarization: -57.63 SS G_CDS: 0.33 Total: -57.29 kcal Atomic # 8 Polarization: -12.43 SS G_CDS: 0.09 Total: -12.34 kcal Atomic # 14 Polarization: 18.19 SS G_CDS: -5.02 Total: 13.17 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -27.54 -8.99 -36.54 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000608814912.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.272 kcal (2) G-P(sol) polarization free energy of solvation -27.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.537 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds