Wall clock time and date at job start Tue Mar 31 2020 11:27:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52997 * 109.46988 * 2 1 4 4 N 1.46507 * 109.46869 * 119.99811 * 2 1 3 5 5 C 1.38274 * 119.99752 * 85.00303 * 4 2 1 6 6 N 1.32421 * 119.83057 * 354.54638 * 5 4 2 7 7 C 1.31852 * 121.78081 * 179.97438 * 6 5 4 8 8 C 1.38378 * 121.21666 * 0.02562 * 7 6 5 9 9 C 1.38337 * 119.50397 * 0.28315 * 8 7 6 10 10 C 1.39973 * 118.37073 * 359.45459 * 9 8 7 11 11 C 1.47410 * 120.61063 * 180.26741 * 10 9 8 12 12 O 1.21635 * 120.00124 * 185.69448 * 11 10 9 13 13 N 1.34779 * 119.99865 * 5.69362 * 11 10 9 14 14 C 1.40544 * 119.99588 * 180.02562 * 13 11 10 15 15 C 1.40659 * 126.08684 * 0.02562 * 14 13 11 16 16 N 1.30913 * 108.38729 * 180.02562 * 15 14 13 17 17 N 1.40065 * 108.40903 * 0.02562 * 16 15 14 18 18 C 1.37316 * 126.06556 * 180.02562 * 17 16 15 19 19 H 1.08001 * 120.00094 * 179.97438 * 18 17 16 20 20 C 1.38986 * 120.00128 * 359.97438 * 18 17 16 21 21 N 1.31293 * 119.99855 * 359.97438 * 20 18 17 22 22 Si 1.86799 * 119.99913 * 180.02562 * 20 18 17 23 23 H 1.48503 * 109.47256 * 359.97438 * 22 20 18 24 24 H 1.48497 * 109.47287 * 119.99761 * 22 20 18 25 25 H 1.48504 * 109.47087 * 239.99558 * 22 20 18 26 26 C 1.35699 * 126.07902 * 179.71808 * 14 13 11 27 27 H 1.09002 * 109.46807 * 300.00047 * 1 2 3 28 28 H 1.08994 * 109.47057 * 60.00144 * 1 2 3 29 29 H 1.08997 * 109.47052 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47143 * 239.99651 * 2 1 3 31 31 H 1.09007 * 109.46941 * 179.97438 * 3 2 1 32 32 H 1.08994 * 109.47104 * 299.99827 * 3 2 1 33 33 H 1.09002 * 109.47385 * 60.00307 * 3 2 1 34 34 H 0.96998 * 119.99487 * 264.99749 * 4 2 1 35 35 H 1.07998 * 119.39034 * 180.02562 * 7 6 5 36 36 H 1.07990 * 120.24297 * 180.02562 * 8 7 6 37 37 H 1.08006 * 120.81254 * 179.69913 * 9 8 7 38 38 H 0.96999 * 120.00156 * 359.97438 * 13 11 10 39 39 H 1.07994 * 125.80872 * 0.02562 * 15 14 13 40 40 H 0.97000 * 119.99548 * 180.02562 * 21 20 18 41 41 H 1.08000 * 126.24676 * 359.95513 * 26 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0183 -0.6906 1.1963 5 6 2.1504 -2.0670 1.1944 6 7 1.7337 -2.7673 0.1506 7 6 1.8413 -4.0808 0.1079 8 6 2.3972 -4.7894 1.1585 9 6 2.8438 -4.1100 2.2778 10 6 2.7256 -2.7155 2.3005 11 6 3.1909 -1.9417 3.4658 12 8 2.9897 -0.7433 3.5197 13 7 3.8392 -2.5621 4.4714 14 6 4.2824 -1.8244 5.5825 15 6 4.1186 -0.4410 5.7773 16 7 4.6611 -0.1184 6.9242 17 7 5.1910 -1.2778 7.5046 18 6 5.8414 -1.3529 8.7116 19 1 6.2119 -2.3030 9.0671 20 6 6.0229 -0.2063 9.4758 21 7 5.5729 0.9489 9.0433 22 14 6.9083 -0.3084 11.1174 23 1 7.3145 -1.7136 11.3742 24 1 8.1142 0.5576 11.0842 25 1 5.9998 0.1494 12.1992 26 6 4.9392 -2.3210 6.6611 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 1.8934 -0.5139 -0.8899 31 1 3.1301 1.4425 0.0005 32 1 1.6767 1.9563 -0.8899 33 1 1.6767 1.9563 0.8900 34 1 2.2490 -0.1822 1.9895 35 1 1.4891 -4.6133 -0.7631 36 1 2.4780 -5.8650 1.1067 37 1 3.2767 -4.6423 3.1119 38 1 3.9994 -3.5178 4.4285 39 1 3.6287 0.2393 5.0965 40 1 5.7000 1.7491 9.5765 41 1 5.2151 -3.3528 6.8214 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000746183469.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:27:57 Heat of formation + Delta-G solvation = 91.917450 kcal Electronic energy + Delta-G solvation = -25429.001907 eV Core-core repulsion = 21732.131913 eV Total energy + Delta-G solvation = -3696.869994 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -40.69684 -39.64872 -38.24913 -36.93397 -34.36989 -33.33574 -32.37445 -32.29362 -30.25796 -28.98729 -27.62096 -27.21984 -25.15129 -24.22786 -22.92868 -21.45330 -20.72326 -20.42549 -19.42361 -17.85914 -17.67458 -17.01651 -16.52796 -15.49877 -15.23317 -15.05443 -14.96337 -14.66187 -14.42423 -14.21155 -13.90231 -13.68153 -13.14841 -12.98157 -12.95670 -12.87521 -12.56458 -12.26667 -11.99656 -11.70890 -11.50173 -11.44964 -11.30210 -11.01995 -10.93116 -10.52627 -10.28764 -10.24350 -9.76274 -9.72343 -9.20898 -9.12388 -8.83845 -8.09043 -7.68101 -6.71878 -6.58350 -4.25108 0.85802 1.46878 2.88330 3.03605 3.08709 3.09693 3.31497 3.58182 3.63317 3.86305 4.01683 4.44224 4.46861 4.71831 4.74610 4.87355 4.99888 5.01754 5.07214 5.13058 5.22554 5.30487 5.54313 5.55979 5.72403 5.76776 5.87333 5.90174 6.10318 6.13452 6.21646 6.24352 6.40568 6.51277 6.85815 6.92305 7.03663 7.19412 7.31619 7.58458 7.83200 8.10366 8.20798 8.32801 8.61417 8.82055 9.34861 9.63970 10.37642 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.021365 B = 0.002951 C = 0.002625 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.217709 B = 9486.975102 C =10664.833715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.142 3.858 3 C -0.162 4.162 4 N -0.695 5.695 5 C 0.454 3.546 6 N -0.550 5.550 7 C 0.172 3.828 8 C -0.253 4.253 9 C -0.001 4.001 10 C -0.254 4.254 11 C 0.558 3.442 12 O -0.546 6.546 13 N -0.613 5.613 14 C -0.062 4.062 15 C -0.030 4.030 16 N -0.260 5.260 17 N -0.142 5.142 18 C -0.322 4.322 19 H 0.117 0.883 20 C 0.046 3.954 21 N -0.769 5.769 22 Si 0.935 3.065 23 H -0.263 1.263 24 H -0.274 1.274 25 H -0.274 1.274 26 C -0.083 4.083 27 H 0.053 0.947 28 H 0.059 0.941 29 H 0.061 0.939 30 H 0.083 0.917 31 H 0.061 0.939 32 H 0.069 0.931 33 H 0.062 0.938 34 H 0.427 0.573 35 H 0.155 0.845 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.397 0.603 39 H 0.176 0.824 40 H 0.274 0.726 41 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.996 -8.387 -15.198 18.365 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C 0.036 3.964 3 C -0.220 4.220 4 N -0.338 5.338 5 C 0.214 3.786 6 N -0.269 5.269 7 C 0.011 3.989 8 C -0.276 4.276 9 C -0.028 4.028 10 C -0.265 4.265 11 C 0.347 3.653 12 O -0.427 6.427 13 N -0.253 5.253 14 C -0.167 4.167 15 C -0.206 4.206 16 N -0.091 5.091 17 N 0.091 4.909 18 C -0.455 4.455 19 H 0.135 0.865 20 C -0.171 4.171 21 N -0.395 5.395 22 Si 0.759 3.241 23 H -0.187 1.187 24 H -0.199 1.199 25 H -0.199 1.199 26 C -0.234 4.234 27 H 0.073 0.927 28 H 0.078 0.922 29 H 0.080 0.920 30 H 0.101 0.899 31 H 0.080 0.920 32 H 0.088 0.912 33 H 0.081 0.919 34 H 0.279 0.721 35 H 0.172 0.828 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.231 0.769 39 H 0.193 0.807 40 H 0.085 0.915 41 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -6.288 -5.693 -15.028 17.257 hybrid contribution 0.724 -1.745 1.093 2.183 sum -5.564 -7.439 -13.935 16.748 Atomic orbital electron populations 1.22184 0.95762 1.02423 1.01568 1.20898 0.93956 0.92618 0.88899 1.22073 1.01880 0.95335 1.02675 1.45843 1.67459 1.02402 1.18123 1.18300 0.86657 0.86072 0.87618 1.67356 1.24307 1.08850 1.26343 1.22579 0.90685 0.88755 0.96839 1.21655 1.08545 1.01243 0.96148 1.21501 0.91934 0.92185 0.97132 1.20169 1.13843 0.94578 0.97922 1.17672 0.78881 0.86811 0.81925 1.90285 1.58803 1.14993 1.78604 1.42285 1.54632 1.10526 1.17875 1.17262 1.15457 0.92449 0.91543 1.24104 1.05632 0.93305 0.97529 1.78261 1.17295 1.05437 1.08136 1.44560 1.30906 1.03387 1.12053 1.19928 1.35392 0.97112 0.93038 0.86545 1.25648 0.96701 0.94619 1.00164 1.70226 1.34796 0.98730 1.35792 0.85760 0.78980 0.79263 0.80120 1.18680 1.19898 1.19901 1.21259 1.13380 0.94164 0.94617 0.92739 0.92165 0.92032 0.89864 0.92005 0.91222 0.91897 0.72095 0.82771 0.84918 0.84890 0.76920 0.80681 0.91497 0.83673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.74 9.50 37.16 0.35 -1.39 16 2 C 0.14 1.68 3.15 -67.93 -0.21 1.46 16 3 C -0.16 -1.68 9.38 37.16 0.35 -1.33 16 4 N -0.70 -10.19 5.09 -53.73 -0.27 -10.47 16 5 C 0.45 6.72 7.46 -155.18 -1.16 5.56 16 6 N -0.55 -7.19 9.15 -12.20 -0.11 -7.30 16 7 C 0.17 1.76 11.16 -17.49 -0.20 1.56 16 8 C -0.25 -2.42 10.09 -39.49 -0.40 -2.82 16 9 C 0.00 -0.01 9.63 -38.90 -0.37 -0.39 16 10 C -0.25 -3.77 5.91 -104.65 -0.62 -4.38 16 11 C 0.56 10.07 7.72 -12.53 -0.10 9.97 16 12 O -0.55 -11.22 10.82 5.25 0.06 -11.17 16 13 N -0.61 -10.97 5.42 -10.97 -0.06 -11.03 16 14 C -0.06 -1.41 6.90 -83.86 -0.58 -1.99 16 15 C -0.03 -0.79 10.85 -17.03 -0.18 -0.97 16 16 N -0.26 -7.51 10.40 30.80 0.32 -7.19 16 17 N -0.14 -3.86 3.74 -11.41 -0.04 -3.91 16 18 C -0.32 -8.47 10.25 -14.82 -0.15 -8.63 16 19 H 0.12 2.73 7.83 -52.49 -0.41 2.32 16 20 C 0.05 1.18 5.50 -17.50 -0.10 1.08 16 21 N -0.77 -21.37 11.81 55.49 0.66 -20.71 16 22 Si 0.93 18.80 29.55 -169.99 -5.02 13.78 16 23 H -0.26 -5.02 7.11 56.52 0.40 -4.62 16 24 H -0.27 -5.47 7.11 56.52 0.40 -5.06 16 25 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 26 C -0.08 -1.94 11.50 -16.38 -0.19 -2.13 16 27 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 28 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 29 H 0.06 0.73 8.05 -51.93 -0.42 0.31 16 30 H 0.08 1.00 7.63 -51.93 -0.40 0.60 16 31 H 0.06 0.68 8.14 -51.92 -0.42 0.25 16 32 H 0.07 0.57 8.14 -51.93 -0.42 0.15 16 33 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 34 H 0.43 7.04 5.10 -40.92 -0.21 6.83 16 35 H 0.16 1.04 8.06 -52.49 -0.42 0.62 16 36 H 0.13 0.88 8.06 -52.49 -0.42 0.46 16 37 H 0.13 1.18 6.55 -52.48 -0.34 0.84 16 38 H 0.40 5.52 6.96 -40.82 -0.28 5.23 16 39 H 0.18 4.46 5.91 -52.49 -0.31 4.15 16 40 H 0.27 6.96 8.31 -40.82 -0.34 6.62 16 41 H 0.15 2.81 8.06 -52.49 -0.42 2.38 16 LS Contribution 347.49 15.07 5.24 5.24 Total: -1.00 -32.87 347.49 -7.68 -40.55 By element: Atomic # 1 Polarization: 21.47 SS G_CDS: -4.89 Total: 16.58 kcal Atomic # 6 Polarization: -0.82 SS G_CDS: -3.55 Total: -4.37 kcal Atomic # 7 Polarization: -61.10 SS G_CDS: 0.49 Total: -60.61 kcal Atomic # 8 Polarization: -11.22 SS G_CDS: 0.06 Total: -11.17 kcal Atomic # 14 Polarization: 18.80 SS G_CDS: -5.02 Total: 13.78 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -32.87 -7.68 -40.55 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000746183469.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.471 kcal (2) G-P(sol) polarization free energy of solvation -32.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.553 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds