Wall clock time and date at job start Tue Mar 31 2020 11:24:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53004 * 109.47059 * 2 1 4 4 N 1.46501 * 109.46983 * 119.99536 * 2 1 3 5 5 C 1.34966 * 125.97644 * 274.71735 * 4 2 1 6 6 C 1.35246 * 107.85746 * 179.83959 * 5 4 2 7 7 C 1.40402 * 107.86455 * 0.42498 * 6 5 4 8 8 N 1.40186 * 125.96830 * 179.73914 * 7 6 5 9 9 C 1.34778 * 120.00354 * 359.97226 * 8 7 6 10 10 O 1.21583 * 119.99654 * 0.02562 * 9 8 7 11 11 N 1.34773 * 120.00060 * 179.97438 * 9 8 7 12 12 C 1.39447 * 120.00146 * 175.45586 * 11 9 8 13 13 C 1.38652 * 119.65359 * 186.29257 * 12 11 9 14 14 C 1.40812 * 118.67370 * 179.97438 * 13 12 11 15 15 C 1.41549 * 120.99541 * 179.97438 * 14 13 12 16 16 H 1.07999 * 119.99994 * 201.15274 * 15 14 13 17 17 C 1.40030 * 119.99757 * 21.14890 * 15 14 13 18 18 N 1.30740 * 120.00283 * 12.11200 * 17 15 14 19 19 Si 1.86804 * 119.99774 * 192.10818 * 17 15 14 20 20 H 1.48503 * 109.46908 * 60.00166 * 19 17 15 21 21 H 1.48500 * 109.46928 * 180.02562 * 19 17 15 22 22 H 1.48493 * 109.47340 * 300.00234 * 19 17 15 23 23 C 1.41166 * 118.01100 * 0.02562 * 14 13 12 24 24 C 1.36596 * 119.12562 * 359.97438 * 23 14 13 25 25 N 1.32065 * 121.25503 * 359.72953 * 24 23 14 26 26 N 1.31209 * 108.05735 * 359.73353 * 7 6 5 27 27 H 1.09004 * 109.47135 * 300.00358 * 1 2 3 28 28 H 1.08996 * 109.47164 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.46823 * 59.99884 * 1 2 3 30 30 H 1.08994 * 109.47210 * 239.99651 * 2 1 3 31 31 H 1.08994 * 109.47395 * 59.99764 * 3 2 1 32 32 H 1.08999 * 109.47074 * 180.02562 * 3 2 1 33 33 H 1.09008 * 109.47066 * 299.99639 * 3 2 1 34 34 H 1.08001 * 126.07072 * 359.97438 * 5 4 2 35 35 H 1.08005 * 126.06552 * 180.16011 * 6 5 4 36 36 H 0.97007 * 119.99960 * 179.97438 * 8 7 6 37 37 H 0.97005 * 120.00027 * 355.46144 * 11 9 8 38 38 H 1.07997 * 120.65719 * 0.02562 * 13 12 11 39 39 H 0.96996 * 120.00147 * 179.97438 * 18 17 15 40 40 H 1.07997 * 120.43723 * 179.97438 * 23 14 13 41 41 H 1.07992 * 119.37028 * 179.97438 * 24 23 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0183 -0.6905 1.1962 5 6 2.1979 -0.1365 2.4138 6 6 2.6556 -1.1004 3.2447 7 6 2.7695 -2.2883 2.5049 8 7 3.2149 -3.5239 2.9949 9 6 3.5816 -3.6443 4.2862 10 8 3.5257 -2.6813 5.0263 11 7 4.0093 -4.8324 4.7573 12 6 4.4781 -4.9354 6.0666 13 6 5.0374 -6.1266 6.5032 14 6 5.5046 -6.2077 7.8291 15 6 6.0837 -7.3998 8.3263 16 1 6.1236 -7.5776 9.3908 17 6 6.6047 -8.3486 7.4379 18 7 6.7746 -8.0410 6.1786 19 14 7.0570 -10.0538 8.0521 20 1 5.8512 -10.7132 8.6147 21 1 7.5832 -10.8629 6.9235 22 1 8.0965 -9.9406 9.1063 23 6 5.3773 -5.0649 8.6479 24 6 4.8120 -3.9348 8.1290 25 7 4.3896 -3.8921 6.8784 26 7 2.3862 -2.0398 1.2749 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 -0.8900 30 1 1.8934 -0.5139 -0.8899 31 1 1.6767 1.9564 0.8899 32 1 3.1300 1.4425 -0.0005 33 1 1.6767 1.9564 -0.8901 34 1 2.0077 0.8933 2.6781 35 1 2.8953 -0.9772 4.2905 36 1 3.2592 -4.2924 2.4044 37 1 3.9911 -5.6158 4.1856 38 1 5.1138 -6.9750 5.8393 39 1 7.1358 -8.6980 5.5633 40 1 5.7222 -5.0838 9.6711 41 1 4.7123 -3.0584 8.7520 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000871731464.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:24:54 Heat of formation + Delta-G solvation = 100.026221 kcal Electronic energy + Delta-G solvation = -24906.530794 eV Core-core repulsion = 21210.012423 eV Total energy + Delta-G solvation = -3696.518371 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 315.144 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.26820 -39.78581 -38.08786 -36.06050 -34.41187 -33.99269 -33.71276 -30.51374 -29.96428 -29.37410 -28.20535 -27.65660 -26.02697 -23.23735 -22.55672 -21.91110 -20.74181 -20.21639 -19.67566 -17.89550 -17.64309 -17.20721 -16.42498 -15.55775 -15.46269 -15.14068 -14.81415 -14.47037 -14.29325 -14.17275 -13.70085 -13.47327 -13.21069 -12.96497 -12.88619 -12.62870 -12.61309 -12.44623 -12.33889 -11.77730 -11.46685 -11.43494 -11.18560 -10.90794 -10.62583 -10.57787 -10.29844 -10.10575 -9.79924 -9.51586 -9.40652 -8.68603 -8.04507 -7.97659 -7.75132 -7.02396 -6.76729 -4.64010 1.95417 2.15172 2.64285 2.80662 3.00024 3.02864 3.03227 3.07750 3.27085 3.83255 3.91208 4.25633 4.42777 4.55772 4.69003 4.72666 4.82468 5.09719 5.17338 5.30498 5.34239 5.49005 5.68664 5.71026 5.78557 5.83704 5.94584 6.00230 6.42455 6.52994 6.64297 6.79609 6.91631 7.03142 7.14086 7.17435 7.20496 7.41551 7.47979 7.79170 7.90136 8.11127 8.33091 8.45097 8.72083 8.75076 9.05060 9.71327 10.05371 Molecular weight = 315.14amu Principal moments of inertia in cm(-1) A = 0.031562 B = 0.002428 C = 0.002296 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 886.940037 B =11527.684188 C =12192.993016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.161 3.839 3 C -0.164 4.164 4 N -0.370 5.370 5 C 0.057 3.943 6 C -0.261 4.261 7 C 0.327 3.673 8 N -0.654 5.654 9 C 0.699 3.301 10 O -0.507 6.507 11 N -0.659 5.659 12 C 0.352 3.648 13 C -0.247 4.247 14 C 0.139 3.861 15 C -0.448 4.448 16 H 0.081 0.919 17 C 0.074 3.926 18 N -0.790 5.790 19 Si 0.915 3.085 20 H -0.263 1.263 21 H -0.278 1.278 22 H -0.264 1.264 23 C -0.284 4.284 24 C 0.120 3.880 25 N -0.554 5.554 26 N -0.336 5.336 27 H 0.062 0.938 28 H 0.064 0.936 29 H 0.074 0.926 30 H 0.099 0.901 31 H 0.066 0.934 32 H 0.067 0.933 33 H 0.080 0.920 34 H 0.171 0.829 35 H 0.175 0.825 36 H 0.406 0.594 37 H 0.407 0.593 38 H 0.140 0.860 39 H 0.282 0.718 40 H 0.101 0.899 41 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.265 10.262 -12.650 18.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.059 3.941 3 C -0.223 4.223 4 N -0.155 5.155 5 C -0.088 4.088 6 C -0.292 4.292 7 C 0.071 3.929 8 N -0.307 5.307 9 C 0.398 3.602 10 O -0.376 6.376 11 N -0.307 5.307 12 C 0.127 3.873 13 C -0.273 4.273 14 C 0.131 3.869 15 C -0.479 4.479 16 H 0.100 0.900 17 C -0.144 4.144 18 N -0.416 5.416 19 Si 0.740 3.260 20 H -0.187 1.187 21 H -0.202 1.202 22 H -0.189 1.189 23 C -0.308 4.308 24 C -0.033 4.033 25 N -0.273 5.273 26 N -0.167 5.167 27 H 0.081 0.919 28 H 0.084 0.916 29 H 0.093 0.907 30 H 0.117 0.883 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.098 0.902 34 H 0.188 0.812 35 H 0.193 0.807 36 H 0.241 0.759 37 H 0.242 0.758 38 H 0.158 0.842 39 H 0.093 0.907 40 H 0.120 0.880 41 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -8.798 11.434 -13.737 19.921 hybrid contribution 0.825 -2.073 0.631 2.319 sum -7.973 9.361 -13.106 17.971 Atomic orbital electron populations 1.22250 0.93956 1.03272 1.02830 1.21144 0.94511 0.92468 0.85979 1.22195 1.02434 0.94131 1.03496 1.48261 1.52623 1.06110 1.08481 1.22449 1.01283 0.99817 0.85246 1.21975 1.13430 0.90487 1.03283 1.18825 0.96213 0.86701 0.91209 1.41859 1.68517 1.09556 1.10758 1.15845 0.79136 0.84624 0.80602 1.90936 1.55343 1.36288 1.54999 1.42442 1.65637 1.09523 1.13135 1.17939 0.94666 0.91707 0.83030 1.21779 1.08631 0.97086 0.99829 1.17577 0.87087 0.91728 0.90512 1.19587 1.32948 1.00742 0.94661 0.90037 1.25988 0.93318 1.00615 0.94491 1.69719 1.32203 1.35308 1.04369 0.86245 0.79760 0.80735 0.79297 1.18735 1.20246 1.18879 1.21651 1.12698 0.95264 1.01150 1.21452 0.94918 0.96304 0.90661 1.67159 1.26275 1.29203 1.04698 1.77271 1.27665 0.94598 1.17124 0.91890 0.91650 0.90741 0.88295 0.91451 0.91422 0.90151 0.81177 0.80742 0.75890 0.75836 0.84236 0.90696 0.88044 0.85975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.15 9.52 37.16 0.35 -0.79 16 2 C 0.16 1.33 3.93 -67.93 -0.27 1.06 16 3 C -0.16 -0.95 8.83 37.16 0.33 -0.62 16 4 N -0.37 -4.59 3.53 -54.88 -0.19 -4.79 16 5 C 0.06 0.72 10.58 -17.24 -0.18 0.54 16 6 C -0.26 -4.29 9.61 -39.83 -0.38 -4.67 16 7 C 0.33 5.49 8.11 -154.37 -1.25 4.24 16 8 N -0.65 -10.58 5.45 -15.51 -0.08 -10.67 16 9 C 0.70 13.88 8.49 -86.92 -0.74 13.14 16 10 O -0.51 -11.77 11.73 5.29 0.06 -11.70 16 11 N -0.66 -13.05 5.39 -15.86 -0.09 -13.13 16 12 C 0.35 8.52 7.42 -154.68 -1.15 7.37 16 13 C -0.25 -6.22 8.67 -38.46 -0.33 -6.56 16 14 C 0.14 3.64 5.65 -106.55 -0.60 3.03 16 15 C -0.45 -11.38 9.15 -37.65 -0.34 -11.73 16 16 H 0.08 1.97 7.88 -52.49 -0.41 1.56 16 17 C 0.07 1.77 5.31 -17.35 -0.09 1.68 16 18 N -0.79 -19.14 10.50 55.55 0.58 -18.56 16 19 Si 0.92 17.74 29.58 -169.99 -5.03 12.71 16 20 H -0.26 -5.06 7.11 56.52 0.40 -4.66 16 21 H -0.28 -5.24 7.11 56.52 0.40 -4.84 16 22 H -0.26 -5.10 7.11 56.52 0.40 -4.69 16 23 C -0.28 -6.91 9.85 -39.06 -0.38 -7.30 16 24 C 0.12 2.88 11.10 -18.04 -0.20 2.68 16 25 N -0.55 -14.10 7.86 -12.76 -0.10 -14.20 16 26 N -0.34 -5.19 12.59 31.44 0.40 -4.80 16 27 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 29 H 0.07 0.34 8.14 -51.93 -0.42 -0.08 16 30 H 0.10 0.80 8.14 -51.93 -0.42 0.38 16 31 H 0.07 0.35 7.14 -51.93 -0.37 -0.02 16 32 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 33 H 0.08 0.30 8.14 -51.92 -0.42 -0.12 16 34 H 0.17 1.49 7.25 -52.49 -0.38 1.11 16 35 H 0.18 3.25 5.91 -52.48 -0.31 2.94 16 36 H 0.41 5.25 8.84 -40.82 -0.36 4.89 16 37 H 0.41 6.52 8.72 -40.82 -0.36 6.17 16 38 H 0.14 3.48 5.81 -52.49 -0.30 3.17 16 39 H 0.28 6.20 8.29 -40.82 -0.34 5.86 16 40 H 0.10 2.26 8.06 -52.49 -0.42 1.84 16 41 H 0.12 2.55 8.06 -52.49 -0.42 2.13 16 LS Contribution 348.96 15.07 5.26 5.26 Total: -1.00 -32.54 348.96 -9.45 -41.99 By element: Atomic # 1 Polarization: 20.84 SS G_CDS: -5.01 Total: 15.83 kcal Atomic # 6 Polarization: 7.31 SS G_CDS: -5.24 Total: 2.07 kcal Atomic # 7 Polarization: -66.67 SS G_CDS: 0.52 Total: -66.15 kcal Atomic # 8 Polarization: -11.77 SS G_CDS: 0.06 Total: -11.70 kcal Atomic # 14 Polarization: 17.74 SS G_CDS: -5.03 Total: 12.71 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -32.54 -9.45 -41.99 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000871731464.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.016 kcal (2) G-P(sol) polarization free energy of solvation -32.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.990 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds