Wall clock time and date at job start Tue Mar 31 2020 11:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38253 * 119.99724 * 2 1 4 4 C 1.38219 * 119.99929 * 179.97438 * 3 2 1 5 5 C 1.38255 * 119.99871 * 0.02562 * 4 3 2 6 6 C 1.38208 * 119.99989 * 359.74430 * 5 4 3 7 7 C 1.38212 * 120.00066 * 179.97438 * 2 1 3 8 8 C 1.50696 * 119.99990 * 0.02562 * 7 2 1 9 9 H 1.09001 * 109.47110 * 325.00411 * 8 7 2 10 10 C 1.53012 * 109.46906 * 85.00132 * 8 7 2 11 11 C 1.53001 * 109.47069 * 53.82094 * 10 8 7 12 12 F 1.39901 * 109.46977 * 60.51511 * 11 10 8 13 13 F 1.39892 * 109.47036 * 180.51482 * 11 10 8 14 14 F 1.39900 * 109.46814 * 300.51555 * 11 10 8 15 15 N 1.46904 * 109.47396 * 204.99780 * 8 7 2 16 16 C 1.46888 * 111.00191 * 167.28365 * 15 8 7 17 17 C 1.52998 * 109.47148 * 176.19028 * 16 15 8 18 18 C 1.53008 * 109.47144 * 180.02562 * 17 16 15 19 19 C 1.50698 * 109.47131 * 180.02562 * 18 17 16 20 20 H 1.08003 * 120.00019 * 359.97438 * 19 18 17 21 21 C 1.37880 * 120.00282 * 179.97438 * 19 18 17 22 22 N 1.31516 * 119.99527 * 359.97438 * 21 19 18 23 23 Si 1.86800 * 120.00327 * 179.97438 * 21 19 18 24 24 H 1.48498 * 109.46886 * 89.99757 * 23 21 19 25 25 H 1.48491 * 109.47073 * 210.00170 * 23 21 19 26 26 H 1.48502 * 109.46930 * 330.00304 * 23 21 19 27 27 H 1.08998 * 109.47328 * 270.01916 * 1 2 3 28 28 H 1.09000 * 109.47304 * 30.02255 * 1 2 3 29 29 H 1.09002 * 109.46765 * 150.02109 * 1 2 3 30 30 H 1.07995 * 120.00475 * 359.97438 * 3 2 1 31 31 H 1.07997 * 120.00262 * 180.02562 * 4 3 2 32 32 H 1.08001 * 120.00062 * 180.02562 * 5 4 3 33 33 H 1.08001 * 120.00080 * 180.27850 * 6 5 4 34 34 H 1.08998 * 109.47017 * 293.81671 * 10 8 7 35 35 H 1.09004 * 109.46836 * 173.81773 * 10 8 7 36 36 H 1.00896 * 110.99921 * 291.24101 * 15 8 7 37 37 H 1.09003 * 109.47603 * 296.19239 * 16 15 8 38 38 H 1.09003 * 109.47403 * 56.19145 * 16 15 8 39 39 H 1.08994 * 109.47244 * 299.99758 * 17 16 15 40 40 H 1.08995 * 109.47362 * 60.00225 * 17 16 15 41 41 H 1.09006 * 109.46997 * 299.99665 * 18 17 16 42 42 H 1.08995 * 109.47063 * 59.99729 * 18 17 16 43 43 H 0.97000 * 119.99925 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1973 0.0000 4 6 3.5804 1.1974 0.0005 5 6 4.2717 0.0001 0.0005 6 6 3.5807 -1.1968 0.0053 7 6 2.1981 -1.1969 0.0005 8 6 1.4446 -2.5020 0.0005 9 1 0.5336 -2.3956 0.5895 10 6 1.0813 -2.8811 -1.4367 11 6 2.3449 -2.8799 -2.2994 12 9 3.2541 -3.8164 -1.7960 13 9 2.0110 -3.2151 -3.6159 14 9 2.9249 -1.6070 -2.2749 15 7 2.2866 -3.5536 0.5864 16 6 1.4973 -4.7568 0.8812 17 6 2.4226 -5.8594 1.3998 18 6 1.6004 -7.1129 1.7063 19 6 2.5117 -8.1987 2.2177 20 1 3.5714 -8.0135 2.3140 21 6 1.9928 -9.4287 2.5626 22 7 0.7023 -9.6541 2.4458 23 14 3.1225 -10.7749 3.1958 24 1 3.2244 -10.6807 4.6743 25 1 2.5702 -12.1014 2.8212 26 1 4.4709 -10.6125 2.5954 27 1 -0.3634 0.0003 1.0276 28 1 -0.3634 0.8898 -0.5142 29 1 -0.3633 -0.8902 -0.5135 30 1 1.6583 2.1326 -0.0004 31 1 4.1204 2.1327 0.0010 32 1 5.3517 0.0001 0.0014 33 1 4.1207 -2.1322 0.0099 34 1 0.3692 -2.1580 -1.8342 35 1 0.6345 -3.8753 -1.4482 36 1 3.0656 -3.7710 -0.0169 37 1 0.7492 -4.5240 1.6391 38 1 1.0003 -5.0970 -0.0273 39 1 3.1705 -6.0923 0.6420 40 1 2.9195 -5.5193 2.3083 41 1 0.8521 -6.8803 2.4641 42 1 1.1038 -7.4529 0.7976 43 1 0.3372 -10.5194 2.6880 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000444790741.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:53:49 Heat of formation + Delta-G solvation = -135.422321 kcal Electronic energy + Delta-G solvation = -27309.640724 eV Core-core repulsion = 23132.303390 eV Total energy + Delta-G solvation = -4177.337334 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 315.151 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.30601 -47.81614 -47.69133 -39.91282 -37.12836 -34.27191 -33.02014 -32.18626 -30.53980 -30.09749 -27.20837 -26.30728 -24.94345 -23.16465 -22.67965 -21.32679 -20.82416 -20.00721 -18.67517 -18.65141 -17.39351 -16.53331 -16.25005 -15.69323 -15.44043 -15.24532 -14.71042 -14.54825 -14.46533 -14.34381 -14.21474 -13.90979 -13.79074 -13.72109 -13.65388 -13.45000 -13.12284 -12.80300 -12.56035 -12.42622 -12.16962 -11.95215 -11.77332 -11.52827 -11.45502 -10.99394 -10.85164 -10.82061 -10.56528 -10.48861 -9.72083 -9.35810 -9.06456 -8.72658 -8.63783 -8.34077 -8.31320 -5.99017 -4.00816 1.27864 1.38771 2.64396 3.33346 3.39350 3.43174 3.60337 3.64454 3.87187 3.93760 4.28248 4.48364 4.55953 4.72339 4.74023 4.83754 4.96605 5.05086 5.19754 5.21208 5.24916 5.37091 5.43384 5.51508 5.61330 5.69787 5.77249 5.82748 5.98890 6.06349 6.27144 6.39314 6.49239 6.53022 6.69127 6.74500 6.96919 7.11707 7.23151 7.52005 7.68575 7.82998 8.01197 8.44690 9.06196 9.63206 11.12446 Molecular weight = 315.15amu Principal moments of inertia in cm(-1) A = 0.018723 B = 0.003134 C = 0.003019 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1495.099206 B = 8932.443848 C = 9272.468135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.079 4.079 3 C -0.125 4.125 4 C -0.117 4.117 5 C -0.128 4.128 6 C -0.080 4.080 7 C -0.079 4.079 8 C 0.127 3.873 9 H 0.111 0.889 10 C -0.206 4.206 11 C 0.450 3.550 12 F -0.176 7.176 13 F -0.187 7.187 14 F -0.170 7.170 15 N -0.690 5.690 16 C 0.057 3.943 17 C -0.109 4.109 18 C 0.023 3.977 19 C -0.519 4.519 20 H 0.055 0.945 21 C 0.056 3.944 22 N -0.897 5.897 23 Si 0.892 3.108 24 H -0.280 1.280 25 H -0.287 1.287 26 H -0.274 1.274 27 H 0.073 0.927 28 H 0.066 0.934 29 H 0.065 0.935 30 H 0.118 0.882 31 H 0.117 0.883 32 H 0.119 0.881 33 H 0.123 0.877 34 H 0.114 0.886 35 H 0.118 0.882 36 H 0.348 0.652 37 H 0.070 0.930 38 H 0.026 0.974 39 H 0.045 0.955 40 H 0.057 0.943 41 H 0.016 0.984 42 H 0.014 0.986 43 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.451 22.644 -9.396 24.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.079 4.079 3 C -0.143 4.143 4 C -0.135 4.135 5 C -0.146 4.146 6 C -0.098 4.098 7 C -0.079 4.079 8 C 0.016 3.984 9 H 0.129 0.871 10 C -0.246 4.246 11 C 0.396 3.604 12 F -0.158 7.158 13 F -0.168 7.168 14 F -0.151 7.151 15 N -0.328 5.328 16 C -0.071 4.071 17 C -0.147 4.147 18 C -0.014 4.014 19 C -0.557 4.557 20 H 0.073 0.927 21 C -0.145 4.145 22 N -0.536 5.536 23 Si 0.720 3.280 24 H -0.207 1.207 25 H -0.213 1.213 26 H -0.199 1.199 27 H 0.092 0.908 28 H 0.085 0.915 29 H 0.084 0.916 30 H 0.136 0.864 31 H 0.135 0.865 32 H 0.137 0.863 33 H 0.141 0.859 34 H 0.132 0.868 35 H 0.136 0.864 36 H 0.174 0.826 37 H 0.089 0.911 38 H 0.044 0.956 39 H 0.064 0.936 40 H 0.076 0.924 41 H 0.035 0.965 42 H 0.032 0.968 43 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges 0.332 22.724 -8.763 24.357 hybrid contribution 0.637 -1.196 -0.701 1.525 sum 0.969 21.528 -9.464 23.536 Atomic orbital electron populations 1.20881 0.91496 1.02622 1.02625 1.19615 0.95712 0.92466 1.00143 1.20888 0.94237 0.97062 1.02087 1.21072 0.94297 0.97863 1.00306 1.21061 0.99753 0.92447 1.01301 1.20979 0.93583 0.98327 0.96922 1.19528 0.93897 0.93237 1.01242 1.20481 0.97534 0.90376 0.90050 0.87117 1.23794 0.94742 1.07881 0.98184 1.20650 0.86631 0.73772 0.79310 1.92986 1.70547 1.66352 1.85870 1.93186 1.92359 1.92433 1.38854 1.93281 1.86132 1.39592 1.96099 1.60890 1.11553 1.10111 1.50231 1.22196 0.96788 0.89068 0.99068 1.21640 0.97990 0.95030 1.00001 1.19055 0.95120 0.90594 0.96663 1.21256 0.94287 0.97142 1.43010 0.92662 1.25024 0.95022 0.98625 0.95830 1.69963 1.11478 1.23379 1.48813 0.86596 0.80975 0.81282 0.79177 1.20653 1.21272 1.19869 0.90835 0.91512 0.91593 0.86388 0.86475 0.86320 0.85917 0.86781 0.86421 0.82552 0.91118 0.95561 0.93576 0.92391 0.96528 0.96803 0.93052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.93 9.22 36.01 0.33 -0.60 16 2 C -0.08 -0.81 5.88 -104.63 -0.62 -1.42 16 3 C -0.12 -1.21 9.70 -39.58 -0.38 -1.60 16 4 C -0.12 -1.16 10.05 -39.58 -0.40 -1.56 16 5 C -0.13 -1.39 10.05 -39.59 -0.40 -1.79 16 6 C -0.08 -0.97 6.69 -39.58 -0.26 -1.24 16 7 C -0.08 -0.91 3.48 -104.63 -0.36 -1.27 16 8 C 0.13 1.45 1.87 -68.86 -0.13 1.32 16 9 H 0.11 1.18 6.89 -51.93 -0.36 0.83 16 10 C -0.21 -2.08 5.12 -26.72 -0.14 -2.22 16 11 C 0.45 5.30 2.91 37.16 0.11 5.41 16 12 F -0.18 -2.35 13.95 2.25 0.03 -2.32 16 13 F -0.19 -2.29 17.32 2.25 0.04 -2.25 16 14 F -0.17 -2.06 12.86 2.25 0.03 -2.03 16 15 N -0.69 -9.81 5.59 -107.95 -0.60 -10.41 16 16 C 0.06 0.93 5.52 -3.83 -0.02 0.91 16 17 C -0.11 -2.23 5.37 -26.73 -0.14 -2.38 16 18 C 0.02 0.60 4.97 -27.88 -0.14 0.46 16 19 C -0.52 -14.80 9.11 -34.44 -0.31 -15.11 16 20 H 0.06 1.54 7.74 -52.48 -0.41 1.13 16 21 C 0.06 1.61 5.46 -17.82 -0.10 1.52 16 22 N -0.90 -27.01 13.29 55.43 0.74 -26.27 16 23 Si 0.89 21.83 29.54 -169.99 -5.02 16.81 16 24 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 25 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 26 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 27 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 28 H 0.07 0.43 8.09 -51.93 -0.42 0.01 16 29 H 0.07 0.46 5.38 -51.93 -0.28 0.18 16 30 H 0.12 0.90 8.06 -52.49 -0.42 0.48 16 31 H 0.12 0.90 8.06 -52.49 -0.42 0.48 16 32 H 0.12 1.09 8.06 -52.49 -0.42 0.67 16 33 H 0.12 1.56 6.33 -52.49 -0.33 1.22 16 34 H 0.11 0.89 6.81 -51.93 -0.35 0.54 16 35 H 0.12 1.19 6.53 -51.93 -0.34 0.85 16 36 H 0.35 4.99 3.99 -39.29 -0.16 4.84 16 37 H 0.07 1.16 8.14 -51.93 -0.42 0.73 16 38 H 0.03 0.42 6.51 -51.93 -0.34 0.08 16 39 H 0.05 0.94 8.14 -51.93 -0.42 0.52 16 40 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 41 H 0.02 0.44 8.14 -51.93 -0.42 0.02 16 42 H 0.01 0.37 8.14 -51.93 -0.42 -0.05 16 43 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 LS Contribution 348.87 15.07 5.26 5.26 Total: -1.00 -30.95 348.87 -8.42 -39.37 By element: Atomic # 1 Polarization: 7.33 SS G_CDS: -5.92 Total: 1.40 kcal Atomic # 6 Polarization: -16.60 SS G_CDS: -2.96 Total: -19.56 kcal Atomic # 7 Polarization: -36.82 SS G_CDS: 0.13 Total: -36.68 kcal Atomic # 9 Polarization: -6.70 SS G_CDS: 0.10 Total: -6.60 kcal Atomic # 14 Polarization: 21.83 SS G_CDS: -5.02 Total: 16.81 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -30.95 -8.42 -39.37 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000444790741.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.051 kcal (2) G-P(sol) polarization free energy of solvation -30.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds