Wall clock time and date at job start Tue Mar 31 2020 11:10:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36661 * 119.77548 * 2 1 4 4 C 1.39661 * 119.70606 * 180.02562 * 3 2 1 5 5 C 1.46253 * 134.19049 * 180.02562 * 4 3 2 6 6 C 1.35812 * 106.07917 * 179.97438 * 5 4 3 7 7 C 1.46978 * 125.12442 * 179.97438 * 6 5 4 8 8 O 1.21656 * 120.00354 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99814 * 180.02562 * 7 6 5 10 10 C 1.46504 * 120.00106 * 179.97438 * 9 7 6 11 11 C 1.52996 * 109.47001 * 179.97438 * 10 9 7 12 12 C 1.53003 * 109.47127 * 299.99593 * 11 10 9 13 13 C 1.52996 * 109.47343 * 59.99759 * 11 10 9 14 14 C 1.50707 * 109.46840 * 179.97438 * 11 10 9 15 15 H 1.07995 * 119.99719 * 1.34878 * 14 11 10 16 16 C 1.37878 * 119.99830 * 181.34241 * 14 11 10 17 17 N 1.31513 * 119.99878 * 193.97465 * 16 14 11 18 18 Si 1.86801 * 120.00021 * 13.98035 * 16 14 11 19 19 H 1.48510 * 109.47176 * 84.54310 * 18 16 14 20 20 H 1.48491 * 109.47252 * 204.54462 * 18 16 14 21 21 H 1.48507 * 109.47073 * 324.54795 * 18 16 14 22 22 O 1.34946 * 109.74649 * 0.02562 * 6 5 4 23 23 C 1.34720 * 110.86121 * 0.02562 * 22 6 5 24 24 C 1.38986 * 133.24500 * 179.97438 * 23 22 6 25 25 C 1.37834 * 119.85333 * 180.25521 * 24 23 22 26 26 C 1.50700 * 119.62919 * 179.72528 * 25 24 23 27 27 H 1.08998 * 109.46945 * 89.99940 * 1 2 3 28 28 H 1.08999 * 109.47082 * 209.99840 * 1 2 3 29 29 H 1.09004 * 109.47325 * 330.00169 * 1 2 3 30 30 H 1.08000 * 120.14712 * 0.04073 * 3 2 1 31 31 H 1.08002 * 126.96272 * 359.96452 * 5 4 3 32 32 H 0.97002 * 119.99888 * 359.97438 * 9 7 6 33 33 H 1.08994 * 109.46943 * 299.99479 * 10 9 7 34 34 H 1.09002 * 109.47082 * 59.99539 * 10 9 7 35 35 H 1.08996 * 109.46968 * 69.37183 * 12 11 10 36 36 H 1.08999 * 109.47261 * 189.37007 * 12 11 10 37 37 H 1.08997 * 109.46960 * 309.37217 * 12 11 10 38 38 H 1.09003 * 109.47194 * 60.00002 * 13 11 10 39 39 H 1.09000 * 109.47291 * 179.97438 * 13 11 10 40 40 H 1.08997 * 109.47332 * 300.00193 * 13 11 10 41 41 H 0.97000 * 119.99886 * 180.02562 * 17 16 14 42 42 H 1.07995 * 120.07480 * 359.97438 * 24 23 22 43 43 H 1.09004 * 109.47391 * 90.00183 * 26 25 24 44 44 H 1.09006 * 109.47416 * 209.99647 * 26 25 24 45 45 H 1.08997 * 109.47602 * 329.99885 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1857 1.1862 0.0000 4 6 3.5823 1.1845 -0.0005 5 6 4.6030 2.2319 -0.0002 6 6 5.8001 1.5906 -0.0005 7 6 7.1133 2.2508 -0.0009 8 8 7.1835 3.4654 -0.0015 9 7 8.2396 1.5107 -0.0017 10 6 9.5486 2.1688 -0.0027 11 6 10.6521 1.1091 -0.0028 12 6 10.5211 0.2362 1.2469 13 6 10.5198 0.2351 -1.2516 14 6 11.9986 1.7861 -0.0045 15 1 12.0609 2.8641 0.0167 16 6 13.1507 1.0293 -0.0328 17 7 14.3103 1.5863 0.2404 18 14 13.0646 -0.7873 -0.4595 19 1 13.0793 -0.9504 -1.9355 20 1 14.2336 -1.4897 0.1278 21 1 11.8121 -1.3660 0.0899 22 8 5.6022 0.2557 -0.0016 23 6 4.2866 -0.0342 -0.0025 24 6 3.5745 -1.2278 -0.0042 25 6 2.1964 -1.2046 -0.0102 26 6 1.4294 -2.5018 -0.0183 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3634 0.8900 0.5138 30 1 1.6444 2.1208 0.0007 31 1 4.4382 3.2993 0.0000 32 1 8.1837 0.5423 -0.0017 33 1 9.6417 2.7910 -0.8928 34 1 9.6430 2.7912 0.8872 35 1 9.6250 -0.3791 1.1680 36 1 11.3969 -0.4069 1.3343 37 1 10.4483 0.8728 2.1287 38 1 10.6131 0.8570 -2.1419 39 1 11.3063 -0.5196 -1.2519 40 1 9.5460 -0.2545 -1.2509 41 1 15.1209 1.0539 0.2200 42 1 4.0999 -2.1714 -0.0055 43 1 1.2399 -2.8184 1.0074 44 1 0.4806 -2.3598 -0.5358 45 1 2.0128 -3.2657 -0.5323 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457989401.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:10:42 Heat of formation + Delta-G solvation = -5.308428 kcal Electronic energy + Delta-G solvation = -25633.795977 eV Core-core repulsion = 22003.957545 eV Total energy + Delta-G solvation = -3629.838432 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.64353 -39.51852 -38.79534 -36.82095 -33.76280 -33.33709 -32.53664 -31.57773 -31.19171 -27.60701 -27.38412 -26.41773 -25.80182 -24.90743 -23.04195 -22.02663 -21.57590 -20.16455 -19.29865 -18.12645 -17.34009 -16.51320 -16.15620 -15.62834 -15.61622 -15.30508 -15.00708 -14.84307 -14.42520 -14.31816 -13.91210 -13.25191 -13.22470 -13.20936 -13.12427 -12.92369 -12.67767 -12.64050 -12.49610 -12.24801 -12.06252 -11.83021 -11.74679 -11.38626 -11.20994 -10.50560 -10.42772 -10.27974 -10.19780 -10.09645 -10.04031 -9.16225 -8.77669 -8.71621 -8.66713 -8.48894 -8.31949 -6.16941 -4.14586 0.39869 1.04863 1.71203 2.35327 3.23029 3.23879 3.30462 3.35547 3.36310 3.37779 4.26769 4.33849 4.39210 4.44269 4.64593 4.78974 4.85690 5.02865 5.13605 5.14342 5.19359 5.24577 5.25445 5.36620 5.45943 5.60069 5.67806 5.71080 5.88383 5.96182 5.99483 6.02231 6.12890 6.21304 6.31485 6.35307 6.41633 6.48022 6.56781 6.61614 6.66062 6.84334 6.91488 7.16502 7.38534 7.68007 7.72368 8.25877 8.42767 8.87932 9.46753 10.95977 Molecular weight = 315.16amu Principal moments of inertia in cm(-1) A = 0.025043 B = 0.002744 C = 0.002521 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1117.799128 B =10202.291546 C =11102.074023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.107 4.107 3 C -0.059 4.059 4 C -0.142 4.142 5 C -0.123 4.123 6 C -0.014 4.014 7 C 0.588 3.412 8 O -0.521 6.521 9 N -0.705 5.705 10 C 0.139 3.861 11 C 0.029 3.971 12 C -0.144 4.144 13 C -0.150 4.150 14 C -0.514 4.514 15 H 0.078 0.922 16 C 0.076 3.924 17 N -0.890 5.890 18 Si 0.885 3.115 19 H -0.285 1.285 20 H -0.305 1.305 21 H -0.249 1.249 22 O -0.183 6.183 23 C 0.068 3.932 24 C -0.109 4.109 25 C -0.053 4.053 26 C -0.115 4.115 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.067 0.933 30 H 0.130 0.870 31 H 0.170 0.830 32 H 0.403 0.597 33 H 0.068 0.932 34 H 0.069 0.931 35 H 0.022 0.978 36 H 0.058 0.942 37 H 0.048 0.952 38 H 0.054 0.946 39 H 0.043 0.957 40 H 0.030 0.970 41 H 0.265 0.735 42 H 0.135 0.865 43 H 0.075 0.925 44 H 0.073 0.927 45 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -27.722 -7.483 -0.492 28.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.107 4.107 3 C -0.077 4.077 4 C -0.143 4.143 5 C -0.144 4.144 6 C -0.064 4.064 7 C 0.372 3.628 8 O -0.399 6.399 9 N -0.354 5.354 10 C 0.017 3.983 11 C 0.027 3.973 12 C -0.202 4.202 13 C -0.207 4.207 14 C -0.551 4.551 15 H 0.096 0.904 16 C -0.127 4.127 17 N -0.526 5.526 18 Si 0.717 3.283 19 H -0.213 1.213 20 H -0.234 1.234 21 H -0.175 1.175 22 O -0.085 6.085 23 C 0.020 3.980 24 C -0.127 4.127 25 C -0.054 4.054 26 C -0.172 4.172 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.148 0.852 31 H 0.187 0.813 32 H 0.239 0.761 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.041 0.959 36 H 0.076 0.924 37 H 0.067 0.933 38 H 0.073 0.927 39 H 0.061 0.939 40 H 0.049 0.951 41 H 0.075 0.925 42 H 0.153 0.847 43 H 0.093 0.907 44 H 0.092 0.908 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -27.184 -6.823 -0.467 28.032 hybrid contribution 0.202 -1.328 -0.317 1.380 sum -26.982 -8.151 -0.784 28.198 Atomic orbital electron populations 1.20791 0.90619 1.02989 1.02423 1.19366 0.96364 0.92069 1.02913 1.20182 0.91068 0.98215 0.98279 1.19888 0.94509 0.92490 1.07385 1.22693 0.89170 1.00056 1.02461 1.22297 0.96365 0.80214 1.07538 1.16714 0.81442 0.86365 0.78262 1.90877 1.85728 1.12079 1.51261 1.46306 1.06494 1.10804 1.71818 1.21685 0.78639 0.95899 1.02089 1.18733 0.94744 0.92177 0.91618 1.22317 0.99363 0.99231 0.99253 1.22380 0.98370 0.99614 1.00297 1.20686 0.87198 0.94975 1.52289 0.90425 1.24965 0.95286 0.98272 0.94155 1.69947 0.98663 1.37095 1.46919 0.87306 0.76373 0.86294 0.78315 1.21303 1.23356 1.17491 1.84045 1.24457 1.23898 1.76102 1.19686 0.81044 0.95609 1.01697 1.19787 0.92407 0.94860 1.05692 1.19538 0.91989 0.95433 0.98399 1.20854 1.00000 0.93562 1.02765 0.91125 0.91172 0.91444 0.85205 0.81293 0.76077 0.91330 0.91229 0.95879 0.92363 0.93282 0.92657 0.93897 0.95130 0.92514 0.84749 0.90665 0.90820 0.91133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.61 9.15 36.01 0.33 -0.28 16 2 C -0.11 -0.91 5.85 -104.98 -0.61 -1.52 16 3 C -0.06 -0.58 9.68 -39.62 -0.38 -0.96 16 4 C -0.14 -1.75 6.38 -105.19 -0.67 -2.43 16 5 C -0.12 -1.65 10.81 -37.23 -0.40 -2.05 16 6 C -0.01 -0.21 7.07 -36.91 -0.26 -0.47 16 7 C 0.59 10.19 7.79 -12.72 -0.10 10.09 16 8 O -0.52 -10.37 16.83 5.23 0.09 -10.28 16 9 N -0.70 -12.14 5.00 -61.53 -0.31 -12.45 16 10 C 0.14 2.76 4.49 -4.04 -0.02 2.74 16 11 C 0.03 0.62 0.50 -155.66 -0.08 0.54 16 12 C -0.14 -2.96 7.53 37.16 0.28 -2.68 16 13 C -0.15 -3.06 7.52 37.16 0.28 -2.78 16 14 C -0.51 -13.69 8.62 -34.44 -0.30 -13.99 16 15 H 0.08 2.26 7.99 -52.49 -0.42 1.84 16 16 C 0.08 2.11 5.32 -17.82 -0.09 2.01 16 17 N -0.89 -26.48 13.96 55.43 0.77 -25.71 16 18 Si 0.88 21.07 22.79 -169.99 -3.87 17.20 16 19 H -0.29 -6.78 7.10 56.52 0.40 -6.38 16 20 H -0.30 -7.43 7.11 56.52 0.40 -7.03 16 21 H -0.25 -5.41 4.65 56.52 0.26 -5.15 16 22 O -0.18 -2.65 10.28 2.76 0.03 -2.62 16 23 C 0.07 0.88 7.41 -38.35 -0.28 0.59 16 24 C -0.11 -1.13 9.70 -39.45 -0.38 -1.51 16 25 C -0.05 -0.46 5.88 -104.56 -0.61 -1.07 16 26 C -0.12 -0.63 9.15 36.01 0.33 -0.30 16 27 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 28 H 0.07 0.30 6.69 -51.93 -0.35 -0.04 16 29 H 0.07 0.32 8.08 -51.93 -0.42 -0.10 16 30 H 0.13 0.99 8.06 -52.49 -0.42 0.56 16 31 H 0.17 2.00 8.06 -52.49 -0.42 1.58 16 32 H 0.40 6.38 5.97 -40.82 -0.24 6.13 16 33 H 0.07 1.41 8.14 -51.93 -0.42 0.99 16 34 H 0.07 1.45 8.14 -51.93 -0.42 1.02 16 35 H 0.02 0.40 7.13 -51.93 -0.37 0.03 16 36 H 0.06 1.27 4.30 -51.93 -0.22 1.04 16 37 H 0.05 0.99 8.12 -51.93 -0.42 0.57 16 38 H 0.05 1.12 8.14 -51.93 -0.42 0.70 16 39 H 0.04 0.93 2.25 -51.93 -0.12 0.81 16 40 H 0.03 0.53 6.86 -51.93 -0.36 0.17 16 41 H 0.26 7.44 8.31 -40.82 -0.34 7.10 16 42 H 0.13 1.15 8.06 -52.49 -0.42 0.72 16 43 H 0.07 0.35 8.14 -51.93 -0.42 -0.07 16 44 H 0.07 0.32 6.69 -51.93 -0.35 -0.03 16 45 H 0.07 0.34 8.08 -51.93 -0.42 -0.08 16 LS Contribution 355.90 15.07 5.36 5.36 Total: -1.00 -31.02 355.90 -7.25 -38.27 By element: Atomic # 1 Polarization: 10.63 SS G_CDS: -6.34 Total: 4.29 kcal Atomic # 6 Polarization: -11.08 SS G_CDS: -2.98 Total: -14.07 kcal Atomic # 7 Polarization: -38.62 SS G_CDS: 0.47 Total: -38.15 kcal Atomic # 8 Polarization: -13.02 SS G_CDS: 0.12 Total: -12.90 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -3.87 Total: 17.20 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -31.02 -7.25 -38.27 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457989401.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.959 kcal (2) G-P(sol) polarization free energy of solvation -31.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds