Wall clock time and date at job start Tue Mar 31 2020 11:42:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34235 * 116.99818 * 2 1 4 4 O 1.20829 * 119.99791 * 359.97438 * 3 2 1 5 5 C 1.50692 * 120.00047 * 179.97438 * 3 2 1 6 6 N 1.46501 * 109.47336 * 179.97438 * 5 3 2 7 7 C 1.37099 * 120.00408 * 262.97809 * 6 5 3 8 8 H 1.08001 * 119.99814 * 203.52154 * 7 6 5 9 9 C 1.38951 * 119.99888 * 23.52360 * 7 6 5 10 10 N 1.31410 * 119.99675 * 6.95610 * 9 7 6 11 11 Si 1.86799 * 119.99856 * 186.95606 * 9 7 6 12 12 H 1.48496 * 109.47183 * 0.02562 * 11 9 7 13 13 H 1.48503 * 109.46967 * 120.00000 * 11 9 7 14 14 H 1.48493 * 109.46950 * 239.99970 * 11 9 7 15 15 C 1.34776 * 119.99659 * 82.97325 * 6 5 3 16 16 O 1.21294 * 120.00363 * 5.24655 * 15 6 5 17 17 C 1.50706 * 120.00145 * 185.23775 * 15 6 5 18 18 H 1.08997 * 109.46929 * 346.09170 * 17 15 6 19 19 F 1.39901 * 109.46875 * 106.08810 * 17 15 6 20 20 C 1.52988 * 109.47444 * 226.08684 * 17 15 6 21 21 C 1.53004 * 109.47441 * 175.00033 * 20 17 15 22 22 C 1.52998 * 109.47227 * 175.00174 * 21 20 17 23 23 C 1.53007 * 109.46739 * 180.02562 * 22 21 20 24 24 C 1.52995 * 109.47191 * 299.99726 * 23 22 21 25 25 C 1.53004 * 109.46952 * 60.00163 * 24 23 22 26 26 C 1.52994 * 109.47249 * 299.99815 * 25 24 23 27 27 H 1.08997 * 109.47696 * 300.00060 * 1 2 3 28 28 H 1.09008 * 109.47168 * 60.00362 * 1 2 3 29 29 H 1.09002 * 109.46707 * 179.97438 * 1 2 3 30 30 H 1.09007 * 109.47381 * 60.00236 * 5 3 2 31 31 H 1.09001 * 109.47483 * 300.00188 * 5 3 2 32 32 H 0.97006 * 119.99355 * 180.02562 * 10 9 7 33 33 H 1.09003 * 109.47114 * 55.00140 * 20 17 15 34 34 H 1.09003 * 109.47498 * 295.00276 * 20 17 15 35 35 H 1.09003 * 109.46748 * 55.00168 * 21 20 17 36 36 H 1.08994 * 109.47196 * 60.00135 * 22 21 20 37 37 H 1.09006 * 109.46971 * 299.99764 * 22 21 20 38 38 H 1.09000 * 109.47035 * 179.97438 * 23 22 21 39 39 H 1.09003 * 109.47138 * 60.00053 * 23 22 21 40 40 H 1.08991 * 109.47339 * 180.02562 * 24 23 22 41 41 H 1.09006 * 109.47254 * 300.00722 * 24 23 22 42 42 H 1.08994 * 109.46999 * 60.00038 * 25 24 23 43 43 H 1.09006 * 109.46868 * 180.02562 * 25 24 23 44 44 H 1.08998 * 109.47924 * 300.00390 * 26 25 24 45 45 H 1.09000 * 109.47245 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 7 3.9816 2.6799 -0.0002 7 6 4.3157 3.2954 -1.1788 8 1 4.9626 4.1602 -1.1719 9 6 3.8218 2.8067 -2.3821 10 7 2.9287 1.8427 -2.3827 11 14 4.4276 3.5199 -3.9988 12 1 5.4252 4.5857 -3.7268 13 1 5.0589 2.4464 -4.8078 14 1 3.2807 4.0940 -4.7471 15 6 4.0352 3.3673 1.1579 16 8 3.8323 2.7994 2.2103 17 6 4.3474 4.8416 1.1453 18 1 4.7372 5.1221 0.1668 19 9 3.1808 5.5675 1.4082 20 6 5.3930 5.1507 2.2185 21 6 5.8019 6.6220 2.1236 22 6 6.7525 6.9624 3.2731 23 6 7.1608 8.4339 3.1784 24 6 7.8653 8.6829 1.8433 25 6 6.9146 8.3424 0.6938 26 6 6.5064 6.8710 0.7884 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.9564 0.7807 -0.8892 31 1 3.9557 0.7811 0.8908 32 1 2.5843 1.5013 -3.2228 33 1 6.2686 4.5197 2.0652 34 1 4.9714 4.9536 3.2042 35 1 4.9138 7.2507 2.1882 36 1 7.6405 6.3337 3.2085 37 1 6.2504 6.7855 4.2243 38 1 7.8377 8.6766 3.9976 39 1 6.2725 9.0624 3.2433 40 1 8.1565 9.7310 1.7761 41 1 8.7535 8.0544 1.7784 42 1 6.0264 8.9708 0.7587 43 1 7.4167 8.5193 -0.2574 44 1 7.3945 6.2425 0.7236 45 1 5.8295 6.6283 -0.0308 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000793533499.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:42:50 Heat of formation + Delta-G solvation = -187.675853 kcal Electronic energy + Delta-G solvation = -28106.203610 eV Core-core repulsion = 24037.687908 eV Total energy + Delta-G solvation = -4068.515702 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 315.168 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -46.97159 -39.47900 -38.70204 -38.11503 -35.49053 -34.68092 -33.21276 -31.66542 -30.71196 -29.36102 -27.99091 -26.31919 -25.01907 -23.66045 -22.47775 -20.93832 -20.09746 -19.59278 -19.35152 -17.44984 -16.93540 -16.54074 -15.61390 -15.37499 -15.35730 -15.06949 -14.90706 -14.56851 -14.28824 -14.07923 -13.96108 -13.57736 -13.36499 -13.14325 -12.53343 -12.48179 -12.23477 -12.12825 -11.97875 -11.86392 -11.56448 -11.36479 -11.30908 -11.19646 -11.06291 -10.99374 -10.79285 -10.76835 -10.51824 -10.33260 -10.24734 -9.93470 -9.83321 -9.70671 -9.56543 -9.07703 -8.54540 -8.02274 -6.57372 -4.19076 3.00761 3.11878 3.15992 3.35038 3.67667 3.87722 4.01119 4.37401 4.74997 4.78218 4.83304 4.88812 5.16178 5.21749 5.38345 5.45630 5.52050 5.59129 5.63325 5.68474 5.69192 5.73297 5.74881 5.78267 5.85775 5.94670 6.05356 6.06764 6.18943 6.20201 6.20747 6.24956 6.32743 6.38298 6.40793 6.46018 6.62493 6.67473 6.70332 7.19032 7.41427 7.53826 8.09821 8.85566 9.06999 9.20289 9.58740 10.48600 Molecular weight = 315.17amu Principal moments of inertia in cm(-1) A = 0.015219 B = 0.004424 C = 0.003649 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1839.381333 B = 6327.582774 C = 7670.953192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 O -0.374 6.374 3 C 0.486 3.514 4 O -0.502 6.502 5 C 0.155 3.845 6 N -0.421 5.421 7 C -0.339 4.339 8 H 0.105 0.895 9 C 0.042 3.958 10 N -0.875 5.875 11 Si 0.932 3.068 12 H -0.266 1.266 13 H -0.278 1.278 14 H -0.279 1.279 15 C 0.449 3.551 16 O -0.587 6.587 17 C 0.090 3.910 18 H 0.107 0.893 19 F -0.200 7.200 20 C -0.128 4.128 21 C -0.087 4.087 22 C -0.112 4.112 23 C -0.119 4.119 24 C -0.119 4.119 25 C -0.119 4.119 26 C -0.121 4.121 27 H 0.050 0.950 28 H 0.055 0.945 29 H 0.086 0.914 30 H 0.132 0.868 31 H 0.080 0.920 32 H 0.275 0.725 33 H 0.078 0.922 34 H 0.079 0.921 35 H 0.075 0.925 36 H 0.062 0.938 37 H 0.061 0.939 38 H 0.057 0.943 39 H 0.060 0.940 40 H 0.056 0.944 41 H 0.060 0.940 42 H 0.061 0.939 43 H 0.059 0.941 44 H 0.064 0.936 45 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.780 5.473 3.365 9.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 O -0.292 6.292 3 C 0.327 3.673 4 O -0.387 6.387 5 C 0.030 3.970 6 N -0.139 5.139 7 C -0.466 4.466 8 H 0.122 0.878 9 C -0.163 4.163 10 N -0.513 5.513 11 Si 0.758 3.242 12 H -0.190 1.190 13 H -0.203 1.203 14 H -0.205 1.205 15 C 0.237 3.763 16 O -0.472 6.472 17 C 0.051 3.949 18 H 0.124 0.876 19 F -0.181 7.181 20 C -0.166 4.166 21 C -0.106 4.106 22 C -0.150 4.150 23 C -0.156 4.156 24 C -0.156 4.156 25 C -0.156 4.156 26 C -0.158 4.158 27 H 0.069 0.931 28 H 0.073 0.927 29 H 0.104 0.896 30 H 0.149 0.851 31 H 0.098 0.902 32 H 0.085 0.915 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.093 0.907 36 H 0.080 0.920 37 H 0.080 0.920 38 H 0.076 0.924 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.079 0.921 42 H 0.079 0.921 43 H 0.078 0.922 44 H 0.082 0.918 45 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 6.310 5.393 3.720 9.096 hybrid contribution -0.335 0.365 -1.112 1.217 sum 5.975 5.758 2.608 8.699 Atomic orbital electron populations 1.22937 0.78698 1.01822 1.01649 1.86450 1.21661 1.35376 1.85693 1.23885 0.92271 0.80577 0.70523 1.90537 1.66532 1.36370 1.45245 1.20519 0.87254 0.85381 1.03843 1.43376 1.56156 1.08158 1.06237 1.19701 1.29203 1.14977 0.82751 0.87787 1.25331 0.94483 0.96347 1.00148 1.69684 1.26748 1.26736 1.28143 0.85776 0.78634 0.78951 0.80828 1.19035 1.20336 1.20504 1.20561 0.82653 0.88833 0.84292 1.90548 1.55070 1.70320 1.31252 1.21540 0.82673 0.89331 1.01315 0.87600 1.92791 1.51397 1.78175 1.95697 1.22049 0.98459 0.96337 0.99800 1.21157 0.98469 0.95974 0.94964 1.21556 0.99229 0.95979 0.98198 1.21529 1.00155 0.96878 0.97054 1.21535 0.98495 1.00616 0.94973 1.21523 0.99272 0.96864 0.97964 1.21696 1.00548 0.96154 0.97441 0.93129 0.92657 0.89554 0.85071 0.90218 0.91456 0.90342 0.90205 0.90691 0.91973 0.92010 0.92397 0.92103 0.92526 0.92140 0.92057 0.92186 0.91763 0.91351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.77 10.56 101.05 1.07 1.84 16 2 O -0.37 -8.20 10.57 -39.27 -0.41 -8.62 16 3 C 0.49 12.27 6.07 36.00 0.22 12.49 16 4 O -0.50 -14.31 15.75 -18.75 -0.30 -14.60 16 5 C 0.16 3.75 5.16 -5.20 -0.03 3.72 16 6 N -0.42 -10.57 2.19 -116.09 -0.25 -10.82 16 7 C -0.34 -8.29 8.97 -14.93 -0.13 -8.42 16 8 H 0.10 2.33 5.89 -52.49 -0.31 2.03 16 9 C 0.04 1.01 5.17 -17.47 -0.09 0.92 16 10 N -0.87 -22.26 8.83 55.50 0.49 -21.77 16 11 Si 0.93 18.85 29.56 -169.99 -5.02 13.83 16 12 H -0.27 -5.15 7.11 56.52 0.40 -4.74 16 13 H -0.28 -5.53 7.11 56.52 0.40 -5.13 16 14 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 15 C 0.45 11.14 6.68 -10.98 -0.07 11.07 16 16 O -0.59 -15.75 16.30 5.54 0.09 -15.65 16 17 C 0.09 1.89 3.31 -27.89 -0.09 1.79 16 18 H 0.11 2.11 3.74 -51.93 -0.19 1.91 16 19 F -0.20 -4.57 16.66 2.25 0.04 -4.53 16 20 C -0.13 -2.17 4.17 -26.74 -0.11 -2.28 16 21 C -0.09 -1.21 2.15 -90.62 -0.19 -1.40 16 22 C -0.11 -1.31 5.20 -26.73 -0.14 -1.45 16 23 C -0.12 -1.21 5.92 -26.73 -0.16 -1.36 16 24 C -0.12 -1.17 5.92 -26.73 -0.16 -1.33 16 25 C -0.12 -1.32 5.92 -26.73 -0.16 -1.48 16 26 C -0.12 -1.57 4.97 -26.73 -0.13 -1.70 16 27 H 0.05 0.89 8.13 -51.93 -0.42 0.46 16 28 H 0.05 1.01 8.13 -51.92 -0.42 0.59 16 29 H 0.09 1.16 8.14 -51.93 -0.42 0.74 16 30 H 0.13 3.11 6.34 -51.92 -0.33 2.78 16 31 H 0.08 1.80 7.57 -51.93 -0.39 1.40 16 32 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 33 H 0.08 1.26 8.14 -51.93 -0.42 0.84 16 34 H 0.08 1.43 8.06 -51.93 -0.42 1.01 16 35 H 0.07 1.11 7.82 -51.93 -0.41 0.70 16 36 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 37 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 38 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 39 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 40 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 41 H 0.06 0.59 8.14 -51.93 -0.42 0.16 16 42 H 0.06 0.69 8.14 -51.93 -0.42 0.26 16 43 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 44 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 45 H 0.07 0.97 6.46 -51.93 -0.34 0.63 16 LS Contribution 361.38 15.07 5.45 5.45 Total: -1.00 -31.12 361.38 -7.13 -38.25 By element: Atomic # 1 Polarization: 13.08 SS G_CDS: -7.02 Total: 6.07 kcal Atomic # 6 Polarization: 12.59 SS G_CDS: -0.19 Total: 12.41 kcal Atomic # 7 Polarization: -32.82 SS G_CDS: 0.24 Total: -32.59 kcal Atomic # 8 Polarization: -38.25 SS G_CDS: -0.62 Total: -38.87 kcal Atomic # 9 Polarization: -4.57 SS G_CDS: 0.04 Total: -4.53 kcal Atomic # 14 Polarization: 18.85 SS G_CDS: -5.02 Total: 13.83 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -31.12 -7.13 -38.25 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000793533499.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.430 kcal (2) G-P(sol) polarization free energy of solvation -31.120 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds