Wall clock time and date at job start Tue Mar 31 2020 11:30:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.29984 * 119.98921 * 2 1 4 4 N 1.39505 * 122.69333 * 179.97438 * 3 2 1 5 5 C 1.46498 * 119.12529 * 179.97438 * 4 3 2 6 6 N 1.46910 * 109.46851 * 75.64601 * 5 4 3 7 7 C 1.46896 * 110.99919 * 208.87054 * 6 5 4 8 8 C 1.50701 * 109.47106 * 162.62051 * 7 6 5 9 9 H 1.07994 * 119.99681 * 354.67764 * 8 7 6 10 10 C 1.37871 * 119.99982 * 174.68423 * 8 7 6 11 11 N 1.31513 * 120.00424 * 359.97438 * 10 8 7 12 12 Si 1.86801 * 120.00119 * 179.97438 * 10 8 7 13 13 H 1.48502 * 109.47207 * 59.99476 * 12 10 8 14 14 H 1.48499 * 109.47370 * 179.97438 * 12 10 8 15 15 H 1.48503 * 109.47038 * 300.00049 * 12 10 8 16 16 C 1.46898 * 111.00033 * 84.91563 * 6 5 4 17 17 C 1.53002 * 109.47226 * 69.56244 * 16 6 5 18 18 C 1.52992 * 109.47271 * 189.56469 * 16 6 5 19 19 C 1.34952 * 121.74739 * 359.43080 * 4 3 2 20 20 O 1.21804 * 120.62690 * 180.02562 * 19 4 3 21 21 C 1.46806 * 118.73570 * 0.80271 * 19 4 3 22 22 C 1.39426 * 122.01240 * 179.19353 * 21 19 4 23 23 C 1.37759 * 119.39125 * 180.02562 * 22 21 19 24 24 C 1.38899 * 120.70219 * 359.97438 * 23 22 21 25 25 C 1.36687 * 120.91149 * 359.97438 * 24 23 22 26 26 C 1.39625 * 119.66784 * 0.27974 * 25 24 23 27 27 H 1.09002 * 109.46970 * 270.02179 * 1 2 3 28 28 H 1.09000 * 109.47207 * 30.01931 * 1 2 3 29 29 H 1.09000 * 109.46749 * 150.02389 * 1 2 3 30 30 H 1.09005 * 109.47522 * 195.64121 * 5 4 3 31 31 H 1.09000 * 109.47375 * 315.64724 * 5 4 3 32 32 H 1.09002 * 109.47179 * 282.62012 * 7 6 5 33 33 H 1.09001 * 109.47157 * 42.61941 * 7 6 5 34 34 H 0.97001 * 120.00591 * 180.02562 * 11 10 8 35 35 H 1.09002 * 109.47274 * 309.56938 * 16 6 5 36 36 H 1.09008 * 109.46812 * 68.94228 * 17 16 6 37 37 H 1.08996 * 109.47310 * 188.94307 * 17 16 6 38 38 H 1.09005 * 109.47220 * 308.94889 * 17 16 6 39 39 H 1.09002 * 109.47159 * 50.64714 * 18 16 6 40 40 H 1.09000 * 109.47284 * 170.64510 * 18 16 6 41 41 H 1.08998 * 109.47398 * 290.64616 * 18 16 6 42 42 H 1.08004 * 120.30748 * 359.97438 * 22 21 19 43 43 H 1.08001 * 119.65071 * 179.97438 * 23 22 21 44 44 H 1.08001 * 119.54810 * 180.02562 * 24 23 22 45 45 H 1.08001 * 120.16981 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1567 1.1258 0.0000 4 7 3.5502 1.1916 0.0005 5 6 4.2021 2.5036 -0.0001 6 7 4.1119 3.0958 1.3413 7 6 4.0980 4.5629 1.2692 8 6 3.5855 5.1249 2.5702 9 1 3.2182 4.4603 3.3381 10 6 3.5854 6.4876 2.7800 11 7 4.0330 7.2970 1.8451 12 14 2.9494 7.1844 4.3923 13 1 3.7581 6.6483 5.5165 14 1 3.0565 8.6653 4.3681 15 1 1.5284 6.7932 4.5743 16 6 5.2046 2.6212 2.2008 17 6 6.5295 3.2119 1.7143 18 6 4.9480 3.0634 3.6428 19 6 4.3137 0.0789 0.0125 20 8 5.5290 0.1601 0.0132 21 6 3.6516 -1.2314 0.0072 22 6 4.3734 -2.4242 0.0021 23 6 3.6965 -3.6241 -0.0033 24 6 2.3079 -3.6549 -0.0032 25 6 1.5798 -2.4981 0.0028 26 6 2.2385 -1.2670 0.0029 27 1 -0.3633 0.0004 1.0277 28 1 -0.3634 0.8898 -0.5141 29 1 -0.3633 -0.8902 -0.5135 30 1 5.2502 2.3885 -0.2767 31 1 3.7060 3.1555 -0.7191 32 1 5.1094 4.9274 1.0894 33 1 3.4471 4.8805 0.4547 34 1 4.0333 8.2557 1.9928 35 1 5.2544 1.5332 2.1578 36 1 6.5405 4.2852 1.9048 37 1 7.3551 2.7399 2.2469 38 1 6.6367 3.0317 0.6446 39 1 3.9351 2.7847 3.9336 40 1 5.6633 2.5758 4.3052 41 1 5.0627 4.1448 3.7172 42 1 5.4533 -2.4078 0.0016 43 1 4.2515 -4.5506 -0.0076 44 1 1.7963 -4.6061 -0.0070 45 1 0.5005 -2.5361 0.0032 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000745437696.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:32 Heat of formation + Delta-G solvation = 51.272863 kcal Electronic energy + Delta-G solvation = -26914.575272 eV Core-core repulsion = 23319.483140 eV Total energy + Delta-G solvation = -3595.092132 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 315.169 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.91574 -38.72482 -37.41884 -36.97766 -33.71207 -32.54673 -31.75284 -30.69365 -30.41670 -28.53880 -27.32225 -26.15125 -25.04418 -23.79225 -22.97826 -22.20772 -21.26993 -19.10557 -18.44964 -18.11102 -16.75798 -16.29205 -15.94384 -15.32307 -15.04110 -14.93607 -14.73849 -14.59356 -14.28663 -13.92700 -13.67279 -13.30330 -13.25936 -12.72938 -12.44646 -12.40961 -12.23576 -12.18415 -11.77102 -11.58005 -11.56575 -11.26876 -11.13491 -10.85694 -10.74368 -10.73082 -10.63223 -10.25902 -10.18387 -9.66106 -9.53394 -9.36572 -9.31679 -9.04300 -8.37127 -8.19938 -7.30200 -5.99584 -3.96280 0.45031 0.75001 2.10094 2.40332 2.77418 3.34886 3.39222 3.42260 3.77339 3.93972 4.22577 4.43696 4.44941 4.59619 4.89127 4.91920 5.05118 5.14983 5.31180 5.34304 5.40759 5.50607 5.53644 5.67292 5.77569 5.82361 5.84405 5.86067 5.94727 6.07870 6.11318 6.14932 6.31200 6.35091 6.42288 6.53981 6.60514 6.64317 6.78583 7.00412 7.17884 7.41458 7.49238 7.81172 7.91331 8.08169 8.14772 8.29650 8.53647 9.07145 9.62884 11.10829 Molecular weight = 315.17amu Principal moments of inertia in cm(-1) A = 0.018918 B = 0.003788 C = 0.003464 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1479.721422 B = 7389.886477 C = 8082.275313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.105 3.895 3 N -0.200 5.200 4 N -0.407 5.407 5 C 0.281 3.719 6 N -0.537 5.537 7 C 0.192 3.808 8 C -0.498 4.498 9 H 0.072 0.928 10 C 0.054 3.946 11 N -0.900 5.900 12 Si 0.893 3.107 13 H -0.277 1.277 14 H -0.289 1.289 15 H -0.277 1.277 16 C 0.094 3.906 17 C -0.178 4.178 18 C -0.140 4.140 19 C 0.524 3.476 20 O -0.527 6.527 21 C -0.126 4.126 22 C -0.056 4.056 23 C -0.123 4.123 24 C -0.094 4.094 25 C -0.103 4.103 26 C -0.050 4.050 27 H 0.085 0.915 28 H 0.085 0.915 29 H 0.079 0.921 30 H 0.084 0.916 31 H 0.094 0.906 32 H 0.013 0.987 33 H 0.026 0.974 34 H 0.261 0.739 35 H 0.053 0.947 36 H 0.072 0.928 37 H 0.046 0.954 38 H 0.045 0.955 39 H 0.052 0.948 40 H 0.027 0.973 41 H 0.095 0.905 42 H 0.140 0.860 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.970 -20.905 -5.103 22.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.080 4.080 3 N -0.010 5.010 4 N -0.226 5.226 5 C 0.071 3.929 6 N -0.263 5.263 7 C 0.067 3.933 8 C -0.537 4.537 9 H 0.090 0.910 10 C -0.147 4.147 11 N -0.540 5.540 12 Si 0.721 3.279 13 H -0.203 1.203 14 H -0.215 1.215 15 H -0.202 1.202 16 C -0.015 4.015 17 C -0.236 4.236 18 C -0.197 4.197 19 C 0.314 3.686 20 O -0.403 6.403 21 C -0.133 4.133 22 C -0.074 4.074 23 C -0.142 4.142 24 C -0.113 4.113 25 C -0.124 4.124 26 C -0.053 4.053 27 H 0.103 0.897 28 H 0.104 0.896 29 H 0.098 0.902 30 H 0.101 0.899 31 H 0.112 0.888 32 H 0.030 0.970 33 H 0.044 0.956 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.091 0.909 37 H 0.065 0.935 38 H 0.064 0.936 39 H 0.071 0.929 40 H 0.046 0.954 41 H 0.114 0.886 42 H 0.157 0.843 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -4.666 -19.707 -4.938 20.845 hybrid contribution 0.668 -0.162 0.573 0.895 sum -3.998 -19.868 -4.365 20.731 Atomic orbital electron populations 1.20565 0.86186 1.03942 1.03890 1.23399 0.97297 0.87191 1.00134 1.74515 0.91919 1.24884 1.09672 1.49559 1.00697 1.08106 1.64244 1.22170 0.96069 0.80612 0.94098 1.61965 1.43947 1.12142 1.08210 1.19849 0.96739 0.78402 0.98270 1.21292 1.40139 0.91186 1.01049 0.91020 1.24955 0.95893 0.97046 0.96831 1.69939 1.47275 1.03452 1.33325 0.86631 0.79561 0.77689 0.83981 1.20276 1.21478 1.20247 1.21430 0.88446 0.97082 0.94532 1.22404 0.98265 1.02772 1.00186 1.22183 0.99699 1.04537 0.93317 1.18643 0.87440 0.84721 0.77786 1.90860 1.12340 1.86633 1.50513 1.20171 0.93056 0.94322 1.05715 1.21123 1.00782 0.90494 0.95041 1.21264 0.94545 0.97866 1.00503 1.21065 0.94157 0.98573 0.97462 1.20975 1.00530 0.90877 0.99977 1.19718 0.92257 0.94570 0.98798 0.89665 0.89626 0.90185 0.89890 0.88809 0.96970 0.95636 0.92961 0.92908 0.90924 0.93456 0.93579 0.92918 0.95408 0.88632 0.84260 0.85075 0.85178 0.84351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.77 9.79 36.01 0.35 -0.42 16 2 C 0.11 1.41 7.10 -80.14 -0.57 0.84 16 3 N -0.20 -3.46 11.30 34.88 0.39 -3.07 16 4 N -0.41 -7.64 3.75 -64.52 -0.24 -7.88 16 5 C 0.28 5.63 5.55 -63.31 -0.35 5.28 16 6 N -0.54 -11.97 4.59 -231.96 -1.06 -13.03 16 7 C 0.19 4.87 4.47 -4.98 -0.02 4.85 16 8 C -0.50 -13.50 6.52 -34.44 -0.22 -13.73 16 9 H 0.07 1.95 5.61 -52.49 -0.29 1.65 16 10 C 0.05 1.48 5.46 -17.82 -0.10 1.39 16 11 N -0.90 -26.18 13.29 55.43 0.74 -25.45 16 12 Si 0.89 21.48 29.54 -169.99 -5.02 16.46 16 13 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 14 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 15 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 16 C 0.09 1.99 2.90 -67.72 -0.20 1.79 16 17 C -0.18 -3.56 8.32 37.16 0.31 -3.25 16 18 C -0.14 -2.97 7.70 37.15 0.29 -2.69 16 19 C 0.52 9.55 7.19 -12.72 -0.09 9.46 16 20 O -0.53 -10.59 15.39 5.10 0.08 -10.51 16 21 C -0.13 -1.87 5.90 -104.81 -0.62 -2.49 16 22 C -0.06 -0.67 9.67 -39.31 -0.38 -1.05 16 23 C -0.12 -1.08 10.01 -39.51 -0.40 -1.47 16 24 C -0.09 -0.73 9.96 -39.90 -0.40 -1.12 16 25 C -0.10 -0.91 9.36 -39.62 -0.37 -1.28 16 26 C -0.05 -0.62 5.89 -104.96 -0.62 -1.24 16 27 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 28 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.08 0.46 6.59 -51.93 -0.34 0.12 16 30 H 0.08 1.67 4.85 -51.93 -0.25 1.42 16 31 H 0.09 1.84 7.46 -51.93 -0.39 1.45 16 32 H 0.01 0.33 5.70 -51.93 -0.30 0.04 16 33 H 0.03 0.69 7.58 -51.93 -0.39 0.30 16 34 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 35 H 0.05 1.14 6.97 -51.93 -0.36 0.78 16 36 H 0.07 1.58 6.50 -51.92 -0.34 1.25 16 37 H 0.05 0.86 8.14 -51.93 -0.42 0.43 16 38 H 0.05 0.90 6.22 -51.93 -0.32 0.58 16 39 H 0.05 1.15 7.35 -51.93 -0.38 0.77 16 40 H 0.03 0.51 8.14 -51.93 -0.42 0.09 16 41 H 0.10 2.25 5.61 -51.93 -0.29 1.96 16 42 H 0.14 1.64 7.81 -52.48 -0.41 1.23 16 43 H 0.13 0.78 8.06 -52.49 -0.42 0.36 16 44 H 0.13 0.59 8.06 -52.49 -0.42 0.17 16 45 H 0.14 0.79 6.54 -52.49 -0.34 0.44 16 LS Contribution 356.73 15.07 5.38 5.38 Total: -1.00 -32.37 356.73 -9.21 -41.58 By element: Atomic # 1 Polarization: 7.76 SS G_CDS: -6.09 Total: 1.68 kcal Atomic # 6 Polarization: -1.76 SS G_CDS: -3.38 Total: -5.14 kcal Atomic # 7 Polarization: -49.26 SS G_CDS: -0.18 Total: -49.43 kcal Atomic # 8 Polarization: -10.59 SS G_CDS: 0.08 Total: -10.51 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.02 Total: 16.46 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -32.37 -9.21 -41.58 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000745437696.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.850 kcal (2) G-P(sol) polarization free energy of solvation -32.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.577 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds