Wall clock time and date at job start Tue Mar 31 2020 11:03:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09000 * 109.46907 * 2 1 4 4 N 1.46903 * 109.47232 * 239.99474 * 2 1 3 5 5 C 1.46900 * 110.99811 * 85.00114 * 4 2 1 6 6 C 1.52997 * 109.46987 * 185.01900 * 5 4 2 7 7 C 1.53001 * 112.84522 * 55.01828 * 6 5 4 8 8 C 1.53003 * 117.49871 * 118.95100 * 7 6 5 9 9 C 1.53001 * 60.00063 * 252.50914 * 8 7 6 10 10 C 1.53777 * 113.61337 * 186.20647 * 6 5 4 11 11 C 1.53957 * 87.01948 * 89.23397 * 10 6 5 12 12 C 1.53772 * 113.61627 * 283.81810 * 6 5 4 13 13 C 1.50704 * 109.47023 * 119.99524 * 2 1 3 14 14 C 1.38298 * 119.92765 * 79.72497 * 13 2 1 15 15 C 1.38109 * 120.06460 * 179.72578 * 14 13 2 16 16 C 1.38872 * 119.92920 * 0.52933 * 15 14 13 17 17 O 1.35758 * 120.06775 * 179.72525 * 16 15 14 18 18 C 1.34824 * 116.99886 * 185.55364 * 17 16 15 19 19 H 1.08001 * 120.00529 * 354.94841 * 18 17 16 20 20 C 1.38660 * 119.99883 * 174.94238 * 18 17 16 21 21 N 1.31560 * 119.99924 * 0.02562 * 20 18 17 22 22 Si 1.86796 * 120.00119 * 180.02562 * 20 18 17 23 23 H 1.48499 * 109.47344 * 90.00090 * 22 20 18 24 24 H 1.48507 * 109.47001 * 210.00255 * 22 20 18 25 25 H 1.48498 * 109.47216 * 330.00119 * 22 20 18 26 26 C 1.38875 * 119.86364 * 359.74433 * 16 15 14 27 27 C 1.38098 * 119.93293 * 0.02562 * 26 16 15 28 28 H 1.08997 * 109.46746 * 300.00538 * 1 2 3 29 29 H 1.08995 * 109.46723 * 60.00496 * 1 2 3 30 30 H 1.09000 * 109.46907 * 180.02562 * 1 2 3 31 31 H 1.00898 * 110.99298 * 208.95226 * 4 2 1 32 32 H 1.09007 * 109.46869 * 65.02426 * 5 4 2 33 33 H 1.08997 * 109.47260 * 305.02777 * 5 4 2 34 34 H 1.08997 * 115.55979 * 264.64095 * 7 6 5 35 35 H 1.08997 * 117.50197 * 359.97438 * 8 7 6 36 36 H 1.09007 * 117.49370 * 145.01785 * 8 7 6 37 37 H 1.09000 * 117.49663 * 252.51263 * 9 8 7 38 38 H 1.08998 * 117.49983 * 107.48973 * 9 8 7 39 39 H 1.09007 * 113.61829 * 203.75132 * 10 6 5 40 40 H 1.09002 * 113.61885 * 334.65612 * 10 6 5 41 41 H 1.08994 * 113.53755 * 270.81618 * 11 10 6 42 42 H 1.08995 * 113.66837 * 139.92666 * 11 10 6 43 43 H 1.08997 * 113.62023 * 25.35226 * 12 6 5 44 44 H 1.09009 * 113.61231 * 156.25453 * 12 6 5 45 45 H 1.07999 * 119.96747 * 359.97438 * 14 13 2 46 46 H 1.07998 * 120.02921 * 180.27883 * 15 14 13 47 47 H 0.96993 * 120.00060 * 179.97438 * 21 20 18 48 48 H 1.08010 * 120.03213 * 179.97438 * 26 16 15 49 49 H 1.08000 * 119.96726 * 179.97438 * 27 26 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0197 -0.6926 -1.1994 5 6 2.0826 0.2224 -2.3469 6 6 2.4753 -0.5596 -3.6018 7 6 1.5492 -1.7462 -3.8765 8 6 0.7707 -1.7446 -5.1936 9 6 0.0423 -1.4815 -3.8741 10 6 2.7169 0.3308 -4.8321 11 6 4.1830 0.4295 -4.3727 12 6 3.9696 -0.9176 -3.6621 13 6 2.0324 -0.7103 1.2306 14 6 2.0608 -2.0926 1.2661 15 6 2.5259 -2.7464 2.3902 16 6 2.9549 -2.0145 3.4896 17 8 3.4074 -2.6544 4.5982 18 6 3.6996 -1.8900 5.6697 19 1 3.6484 -0.8138 5.5955 20 6 4.0657 -2.4857 6.8671 21 7 4.1284 -3.7967 6.9574 22 14 4.4699 -1.4268 8.3519 23 1 3.2335 -1.1834 9.1377 24 1 5.4670 -2.1259 9.2018 25 1 5.0305 -0.1292 7.8967 26 6 2.9198 -0.6267 3.4529 27 6 2.4581 0.0213 2.3242 28 1 -0.3633 0.5139 0.8899 29 1 -0.3632 0.5137 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 2.9174 -1.1205 -1.0285 32 1 2.8253 0.9966 -2.1540 33 1 1.1068 0.6844 -2.4971 34 1 1.8919 -2.7082 -3.4955 35 1 0.9179 -0.8981 -5.8643 36 1 0.6012 -2.7058 -5.6791 37 1 -0.6065 -2.2695 -3.4915 38 1 -0.2894 -0.4621 -3.6768 39 1 2.5908 -0.1913 -5.7806 40 1 2.1822 1.2800 -4.7960 41 1 4.3704 1.2582 -3.6900 42 1 4.9020 0.3826 -5.1906 43 1 4.4448 -0.9749 -2.6829 44 1 4.1866 -1.7817 -4.2903 45 1 1.7227 -2.6612 0.4124 46 1 2.5520 -3.8257 2.4156 47 1 4.3848 -4.2134 7.7949 48 1 3.2525 -0.0547 4.3067 49 1 2.4302 1.1006 2.2952 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000182059077.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:37 Heat of formation + Delta-G solvation = 37.577988 kcal Electronic energy + Delta-G solvation = -26058.613201 eV Core-core repulsion = 22566.467558 eV Total energy + Delta-G solvation = -3492.145643 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 315.194 amu Computer time = -0.75 seconds Orbital eigenvalues (eV) -40.35100 -39.12535 -37.32336 -35.84249 -35.13969 -32.29843 -30.90723 -30.13375 -27.92066 -26.89156 -25.97893 -25.38438 -24.16768 -22.33144 -22.22525 -21.68026 -21.06947 -19.88278 -18.11366 -17.91252 -17.03195 -16.60891 -15.76808 -15.32379 -15.04754 -14.81762 -14.50405 -14.13603 -14.08318 -13.70989 -13.57470 -13.34288 -12.84893 -12.75915 -12.57023 -12.51855 -12.37777 -12.25055 -11.78456 -11.67996 -11.57442 -11.46984 -11.28011 -11.18159 -10.82907 -10.73692 -10.64739 -10.62717 -10.42114 -10.37432 -10.29980 -10.01241 -9.71562 -9.33056 -8.82326 -8.25992 -8.15269 -7.16404 -6.44920 -4.03754 2.24034 2.32175 3.12328 3.13347 3.17833 3.78976 3.96608 4.04747 4.38100 4.56429 4.58656 4.64409 4.66862 4.84594 4.95327 5.06953 5.08902 5.16728 5.32989 5.36125 5.44340 5.47651 5.49967 5.54670 5.62628 5.63043 5.69280 5.71178 5.72779 5.75621 5.83574 5.90065 5.92325 6.03717 6.06019 6.09002 6.16761 6.24829 6.26291 6.28989 6.41954 6.51219 6.75071 6.89338 7.05803 7.10876 7.28708 7.44575 7.46784 7.60491 7.84979 8.00292 9.00825 9.71581 10.73218 Molecular weight = 315.19amu Principal moments of inertia in cm(-1) A = 0.024573 B = 0.002455 C = 0.002429 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1139.176563 B =11401.033985 C =11523.203311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.144 3.856 3 H 0.037 0.963 4 N -0.674 5.674 5 C 0.086 3.914 6 C -0.045 4.045 7 C -0.110 4.110 8 C -0.196 4.196 9 C -0.164 4.164 10 C -0.134 4.134 11 C -0.144 4.144 12 C -0.130 4.130 13 C -0.191 4.191 14 C -0.054 4.054 15 C -0.195 4.195 16 C 0.155 3.845 17 O -0.179 6.179 18 C -0.392 4.392 19 H 0.091 0.909 20 C 0.039 3.961 21 N -0.863 5.863 22 Si 0.940 3.060 23 H -0.273 1.273 24 H -0.277 1.277 25 H -0.268 1.268 26 C -0.235 4.235 27 C -0.066 4.066 28 H 0.052 0.948 29 H 0.044 0.956 30 H 0.061 0.939 31 H 0.343 0.657 32 H 0.027 0.973 33 H 0.071 0.929 34 H 0.103 0.897 35 H 0.092 0.908 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.086 0.914 40 H 0.063 0.937 41 H 0.077 0.923 42 H 0.064 0.936 43 H 0.066 0.934 44 H 0.081 0.919 45 H 0.119 0.881 46 H 0.115 0.885 47 H 0.270 0.730 48 H 0.125 0.875 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.206 8.144 -21.572 23.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.035 3.965 3 H 0.055 0.945 4 N -0.306 5.306 5 C -0.043 4.043 6 C -0.046 4.046 7 C -0.128 4.128 8 C -0.233 4.233 9 C -0.201 4.201 10 C -0.172 4.172 11 C -0.181 4.181 12 C -0.167 4.167 13 C -0.192 4.192 14 C -0.073 4.073 15 C -0.215 4.215 16 C 0.101 3.899 17 O -0.082 6.082 18 C -0.468 4.468 19 H 0.109 0.891 20 C -0.165 4.165 21 N -0.498 5.498 22 Si 0.765 3.235 23 H -0.199 1.199 24 H -0.203 1.203 25 H -0.192 1.192 26 C -0.254 4.254 27 C -0.085 4.085 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.080 0.920 31 H 0.162 0.838 32 H 0.045 0.955 33 H 0.089 0.911 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.105 0.895 37 H 0.107 0.893 38 H 0.106 0.894 39 H 0.105 0.895 40 H 0.082 0.918 41 H 0.096 0.904 42 H 0.083 0.917 43 H 0.085 0.915 44 H 0.100 0.900 45 H 0.137 0.863 46 H 0.134 0.866 47 H 0.080 0.920 48 H 0.143 0.857 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -4.718 7.484 -21.492 23.242 hybrid contribution 0.953 1.120 1.096 1.834 sum -3.765 8.604 -20.397 22.455 Atomic orbital electron populations 1.21750 0.94654 1.02233 1.00133 1.20112 0.95064 0.94307 0.87056 0.94494 1.60485 1.33594 1.32672 1.03854 1.21694 1.00058 0.93038 0.89535 1.21355 0.94157 0.94500 0.94578 1.21884 0.92575 0.98928 0.99395 1.23136 1.06237 1.02578 0.91374 1.22744 0.95174 1.02239 0.99961 1.23138 0.96514 0.99592 0.97933 1.22852 0.96849 0.98132 1.00280 1.22951 0.95483 0.97378 1.00887 1.19271 1.10068 0.93798 0.96078 1.20494 0.96971 0.93378 0.96410 1.20257 1.08306 0.99383 0.93527 1.19420 0.91099 0.90920 0.88424 1.83981 1.70749 1.35306 1.18152 1.21316 1.47320 0.90731 0.87428 0.89135 1.25285 0.96824 0.96291 0.98127 1.70037 1.44252 1.08662 1.26846 0.85722 0.78567 0.79090 0.80107 1.19875 1.20250 1.19243 1.21111 1.09894 0.94422 0.99996 1.20582 0.97059 0.98068 0.92775 0.92915 0.93683 0.91982 0.83752 0.95474 0.91113 0.87902 0.88933 0.89497 0.89321 0.89385 0.89538 0.91817 0.90434 0.91672 0.91500 0.90001 0.86263 0.86647 0.92030 0.85703 0.87895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.62 9.39 37.16 0.35 -1.28 16 2 C 0.14 1.90 2.81 -68.86 -0.19 1.71 16 3 H 0.04 0.49 7.72 -51.93 -0.40 0.09 16 4 N -0.67 -7.88 5.26 -107.95 -0.57 -8.44 16 5 C 0.09 0.86 4.40 -3.83 -0.02 0.85 16 6 C -0.05 -0.40 0.92 -153.70 -0.14 -0.55 16 7 C -0.11 -1.02 5.13 -90.62 -0.47 -1.49 16 8 C -0.20 -1.62 9.55 -26.73 -0.26 -1.88 16 9 C -0.16 -1.52 9.83 -26.73 -0.26 -1.78 16 10 C -0.13 -1.05 6.38 -25.83 -0.16 -1.21 16 11 C -0.14 -1.15 7.74 -25.82 -0.20 -1.35 16 12 C -0.13 -1.14 7.13 -25.92 -0.18 -1.33 16 13 C -0.19 -3.16 4.71 -104.58 -0.49 -3.65 16 14 C -0.05 -0.95 9.00 -39.61 -0.36 -1.31 16 15 C -0.20 -4.12 9.99 -39.39 -0.39 -4.51 16 16 C 0.16 3.75 6.65 -39.11 -0.26 3.49 16 17 O -0.18 -5.11 9.76 0.04 0.00 -5.11 16 18 C -0.39 -10.98 9.49 30.89 0.29 -10.69 16 19 H 0.09 2.35 5.20 -52.49 -0.27 2.08 16 20 C 0.04 1.07 5.49 -17.51 -0.10 0.98 16 21 N -0.86 -25.41 13.67 55.48 0.76 -24.65 16 22 Si 0.94 20.58 29.55 -169.99 -5.02 15.55 16 23 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 24 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 25 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 26 C -0.23 -5.09 9.17 -39.40 -0.36 -5.45 16 27 C -0.07 -1.20 9.66 -39.61 -0.38 -1.58 16 28 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 29 H 0.04 0.50 7.39 -51.93 -0.38 0.11 16 30 H 0.06 0.83 8.14 -51.93 -0.42 0.40 16 31 H 0.34 4.30 7.43 -39.29 -0.29 4.00 16 32 H 0.03 0.28 7.31 -51.92 -0.38 -0.10 16 33 H 0.07 0.72 6.48 -51.93 -0.34 0.38 16 34 H 0.10 1.06 8.14 -51.93 -0.42 0.63 16 35 H 0.09 0.71 6.14 -51.93 -0.32 0.39 16 36 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 37 H 0.09 0.84 8.14 -51.93 -0.42 0.42 16 38 H 0.09 0.83 7.33 -51.93 -0.38 0.45 16 39 H 0.09 0.64 6.37 -51.93 -0.33 0.31 16 40 H 0.06 0.49 8.10 -51.93 -0.42 0.07 16 41 H 0.08 0.63 7.61 -51.93 -0.40 0.24 16 42 H 0.06 0.48 8.14 -51.93 -0.42 0.05 16 43 H 0.07 0.65 7.59 -51.93 -0.39 0.25 16 44 H 0.08 0.70 8.10 -51.92 -0.42 0.28 16 45 H 0.12 1.87 7.72 -52.49 -0.41 1.47 16 46 H 0.12 2.38 8.06 -52.49 -0.42 1.95 16 47 H 0.27 7.28 8.31 -40.82 -0.34 6.94 16 48 H 0.13 2.73 5.64 -52.48 -0.30 2.43 16 49 H 0.10 1.62 8.03 -52.49 -0.42 1.20 16 LS Contribution 386.40 15.07 5.82 5.82 Total: -1.00 -28.97 386.40 -10.54 -39.51 By element: Atomic # 1 Polarization: 16.29 SS G_CDS: -7.94 Total: 8.35 kcal Atomic # 6 Polarization: -27.44 SS G_CDS: -3.59 Total: -31.03 kcal Atomic # 7 Polarization: -33.28 SS G_CDS: 0.19 Total: -33.09 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: 0.00 Total: -5.11 kcal Atomic # 14 Polarization: 20.58 SS G_CDS: -5.02 Total: 15.55 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -28.97 -10.54 -39.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000182059077.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.090 kcal (2) G-P(sol) polarization free energy of solvation -28.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.512 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = -0.75 seconds