Wall clock time and date at job start Tue Mar 31 2020 10:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 H 1.09009 * 109.47575 * 2 1 4 4 C 1.53004 * 109.47235 * 119.99780 * 2 1 3 5 5 C 1.53781 * 113.61386 * 282.72304 * 4 2 1 6 6 C 1.53775 * 87.08226 * 220.01664 * 5 4 2 7 7 C 1.53774 * 113.61991 * 185.22422 * 4 2 1 8 8 N 1.46498 * 109.47576 * 239.99841 * 2 1 3 9 9 C 1.46507 * 119.99873 * 300.00039 * 8 2 1 10 10 C 1.34770 * 120.00474 * 120.00012 * 8 2 1 11 11 O 1.21287 * 120.00072 * 0.02562 * 10 8 2 12 12 C 1.50700 * 120.00659 * 180.02562 * 10 8 2 13 13 C 1.52998 * 109.47522 * 180.02562 * 12 10 8 14 14 H 1.08993 * 109.47203 * 55.00391 * 13 12 10 15 15 C 1.50704 * 109.46998 * 294.99900 * 13 12 10 16 16 H 1.07998 * 119.99844 * 327.35473 * 15 13 12 17 17 C 1.37869 * 119.99716 * 147.34884 * 15 13 12 18 18 N 1.31519 * 120.00122 * 5.29799 * 17 15 13 19 19 Si 1.86804 * 120.00127 * 185.29644 * 17 15 13 20 20 H 1.48499 * 109.47042 * 59.99788 * 19 17 15 21 21 H 1.48497 * 109.47541 * 180.02562 * 19 17 15 22 22 H 1.48501 * 109.46701 * 300.00092 * 19 17 15 23 23 C 1.50704 * 109.46778 * 175.00227 * 13 12 10 24 24 C 1.38237 * 119.99662 * 245.63512 * 23 13 12 25 25 C 1.38233 * 119.99929 * 179.97438 * 24 23 13 26 26 C 1.38242 * 119.99765 * 359.97397 * 25 24 23 27 27 C 1.38230 * 120.00221 * 0.02562 * 26 25 24 28 28 C 1.38230 * 120.00148 * 65.66103 * 23 13 12 29 29 H 1.09001 * 109.47566 * 184.85157 * 1 2 3 30 30 H 1.09000 * 109.47582 * 304.85866 * 1 2 3 31 31 H 1.09003 * 109.47175 * 64.85596 * 1 2 3 32 32 H 1.09002 * 112.84918 * 54.02421 * 4 2 1 33 33 H 1.09005 * 113.61232 * 334.56110 * 5 4 2 34 34 H 1.09003 * 113.61578 * 105.46550 * 5 4 2 35 35 H 1.09005 * 113.61578 * 270.88169 * 6 5 4 36 36 H 1.08998 * 113.69551 * 139.99244 * 6 5 4 37 37 H 1.09004 * 113.61466 * 254.53134 * 7 4 2 38 38 H 1.09009 * 113.61189 * 25.42762 * 7 4 2 39 39 H 1.08997 * 109.47468 * 270.00263 * 9 8 2 40 40 H 1.08998 * 109.46627 * 29.99800 * 9 8 2 41 41 H 1.08996 * 109.46922 * 149.99617 * 9 8 2 42 42 H 1.08999 * 109.46499 * 59.99582 * 12 10 8 43 43 H 1.09000 * 109.47073 * 300.00093 * 12 10 8 44 44 H 0.97004 * 119.99524 * 179.97438 * 18 17 15 45 45 H 1.08001 * 119.99961 * 0.02562 * 24 23 13 46 46 H 1.08004 * 120.00027 * 180.02562 * 25 24 23 47 47 H 1.07999 * 119.99674 * 179.72784 * 26 25 24 48 48 H 1.07991 * 120.00259 * 179.97438 * 27 26 25 49 49 H 1.08000 * 120.00280 * 0.02562 * 28 23 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 1.9527 0.1270 2.5290 6 6 3.3224 -0.4560 2.9147 7 6 3.5681 -0.6667 1.4114 8 7 2.0183 -0.6906 -1.1961 9 6 1.6645 -2.0933 -1.4279 10 6 2.7932 -0.0357 -2.0832 11 8 3.0866 1.1253 -1.8912 12 6 3.2952 -0.7459 -3.3140 13 6 4.1458 0.2154 -4.1464 14 1 4.9426 0.6257 -3.5261 15 6 3.2799 1.3373 -4.6589 16 1 2.2428 1.1532 -4.8974 17 6 3.8116 2.5987 -4.8231 18 7 5.0972 2.8003 -4.6327 19 14 2.7060 4.0215 -5.3159 20 1 1.6511 4.2079 -4.2875 21 1 3.5150 5.2619 -5.4264 22 1 2.0731 3.7256 -6.6263 23 6 4.7479 -0.5269 -5.3116 24 6 6.1175 -0.6979 -5.3888 25 6 6.6698 -1.3792 -6.4572 26 6 5.8524 -1.8900 -7.4482 27 6 4.4829 -1.7190 -7.3710 28 6 3.9308 -1.0362 -6.3033 29 1 -0.3634 -1.0240 0.0869 30 1 -0.3634 0.5873 0.8432 31 1 -0.3634 0.4367 -0.9303 32 1 1.6247 -1.7231 1.3588 33 1 1.9720 1.2009 2.3432 34 1 1.1462 -0.1734 3.1979 35 1 3.2577 -1.3851 3.4810 36 1 3.9954 0.2708 3.3696 37 1 4.0659 -1.6080 1.1780 38 1 4.0291 0.1902 0.9200 39 1 2.4157 -2.7378 -0.9715 40 1 0.6905 -2.3002 -0.9846 41 1 1.6238 -2.2853 -2.5001 42 1 2.4472 -1.0882 -3.9071 43 1 3.9006 -1.6026 -3.0176 44 1 5.4713 3.6878 -4.7486 45 1 6.7559 -0.2999 -4.6139 46 1 7.7398 -1.5132 -6.5173 47 1 6.2843 -2.4185 -8.2852 48 1 3.8445 -2.1176 -8.1453 49 1 2.8609 -0.9019 -6.2434 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000356692289.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:59:37 Heat of formation + Delta-G solvation = 0.764199 kcal Electronic energy + Delta-G solvation = -27120.357573 eV Core-core repulsion = 23626.615564 eV Total energy + Delta-G solvation = -3493.742009 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 315.194 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -39.87714 -38.54728 -37.91614 -35.12746 -33.91529 -31.66236 -30.96927 -29.97179 -28.57355 -26.57862 -25.89382 -25.29624 -25.28435 -22.91676 -21.64434 -21.22629 -19.66303 -19.29352 -18.30188 -16.60547 -16.38493 -15.95806 -15.63732 -15.24928 -14.95841 -14.50038 -14.32920 -13.99285 -13.83838 -13.10647 -12.98317 -12.72984 -12.61323 -12.48567 -12.37386 -12.31501 -12.10877 -11.99734 -11.85838 -11.67529 -11.61036 -11.51071 -10.92282 -10.81320 -10.66224 -10.55401 -10.44646 -10.30543 -10.22926 -10.12133 -9.98856 -9.40468 -8.99956 -8.75289 -8.29310 -8.07376 -8.00946 -7.56580 -5.89020 -3.88396 2.32445 2.38274 3.41184 3.44886 3.49046 3.50673 3.58999 4.55571 4.63770 4.72187 4.74487 4.78873 4.94189 5.18663 5.33628 5.38524 5.43800 5.47124 5.64569 5.66245 5.69182 5.69388 5.70907 5.76496 5.81461 5.85688 5.87375 5.88130 5.95309 6.05750 6.14880 6.20532 6.23220 6.29089 6.32577 6.36985 6.44741 6.57846 6.59804 6.83898 6.93560 7.05590 7.13557 7.34295 7.48773 7.57046 7.89496 7.98909 8.03886 8.11551 8.43438 9.10539 9.14528 9.73294 11.21188 Molecular weight = 315.19amu Principal moments of inertia in cm(-1) A = 0.011944 B = 0.004401 C = 0.003742 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2343.711590 B = 6360.242227 C = 7480.704836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.146 3.854 3 H 0.099 0.901 4 C -0.117 4.117 5 C -0.132 4.132 6 C -0.144 4.144 7 C -0.130 4.130 8 N -0.626 5.626 9 C 0.084 3.916 10 C 0.516 3.484 11 O -0.496 6.496 12 C -0.119 4.119 13 C 0.080 3.920 14 H 0.070 0.930 15 C -0.490 4.490 16 H 0.049 0.951 17 C 0.078 3.922 18 N -0.882 5.882 19 Si 0.885 3.115 20 H -0.278 1.278 21 H -0.289 1.289 22 H -0.280 1.280 23 C -0.019 4.019 24 C -0.119 4.119 25 C -0.128 4.128 26 C -0.156 4.156 27 C -0.132 4.132 28 C -0.114 4.114 29 H 0.053 0.947 30 H 0.061 0.939 31 H 0.059 0.941 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.063 0.937 35 H 0.075 0.925 36 H 0.065 0.935 37 H 0.061 0.939 38 H 0.085 0.915 39 H 0.046 0.954 40 H 0.061 0.939 41 H 0.070 0.930 42 H 0.075 0.925 43 H 0.063 0.937 44 H 0.259 0.741 45 H 0.112 0.888 46 H 0.105 0.895 47 H 0.103 0.897 48 H 0.105 0.895 49 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.288 -11.552 9.156 15.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.042 3.958 3 H 0.117 0.883 4 C -0.136 4.136 5 C -0.170 4.170 6 C -0.181 4.181 7 C -0.167 4.167 8 N -0.364 5.364 9 C -0.060 4.060 10 C 0.304 3.696 11 O -0.368 6.368 12 C -0.159 4.159 13 C 0.061 3.939 14 H 0.088 0.912 15 C -0.527 4.527 16 H 0.067 0.933 17 C -0.125 4.125 18 N -0.519 5.519 19 Si 0.714 3.286 20 H -0.203 1.203 21 H -0.215 1.215 22 H -0.206 1.206 23 C -0.020 4.020 24 C -0.137 4.137 25 C -0.147 4.147 26 C -0.174 4.174 27 C -0.151 4.151 28 C -0.132 4.132 29 H 0.072 0.928 30 H 0.080 0.920 31 H 0.078 0.922 32 H 0.104 0.896 33 H 0.101 0.899 34 H 0.082 0.918 35 H 0.094 0.906 36 H 0.083 0.917 37 H 0.080 0.920 38 H 0.103 0.897 39 H 0.065 0.935 40 H 0.080 0.920 41 H 0.089 0.911 42 H 0.093 0.907 43 H 0.082 0.918 44 H 0.069 0.931 45 H 0.131 0.869 46 H 0.123 0.877 47 H 0.121 0.879 48 H 0.123 0.877 49 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -4.961 -10.730 9.230 14.997 hybrid contribution -0.642 0.763 -0.459 1.097 sum -5.603 -9.967 8.771 14.410 Atomic orbital electron populations 1.22102 0.95824 1.01535 1.02192 1.20932 0.93232 0.97954 0.83657 0.88254 1.22882 0.96905 0.99369 0.94463 1.22879 0.97315 0.99999 0.96758 1.22813 0.97538 1.00794 0.96974 1.22837 0.95875 1.02374 0.95618 1.48039 1.53211 1.11999 1.23106 1.21604 0.99864 0.82549 1.01952 1.20906 0.77480 0.87256 0.83929 1.90737 1.55224 1.16094 1.74705 1.21795 1.00650 0.99041 0.94442 1.17831 0.95656 0.90621 0.89767 0.91156 1.20622 0.95288 0.92887 1.43944 0.93325 1.24795 0.94640 0.98416 0.94621 1.69908 1.11068 1.22130 1.48831 0.86778 0.80992 0.82239 0.78636 1.20318 1.21466 1.20561 1.20747 0.92692 0.90813 0.97761 1.21081 0.95457 0.98877 0.98321 1.20975 0.98547 0.99726 0.95414 1.20787 0.93967 1.03410 0.99248 1.20972 0.94853 1.00858 0.98377 1.20945 0.99793 0.98144 0.94279 0.92815 0.92011 0.92222 0.89614 0.89947 0.91786 0.90641 0.91660 0.91985 0.89662 0.93541 0.91986 0.91134 0.90682 0.91835 0.93146 0.86948 0.87694 0.87853 0.87718 0.86918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.88 9.00 37.15 0.33 -1.54 16 2 C 0.15 2.05 2.35 -67.93 -0.16 1.89 16 3 H 0.10 1.71 6.81 -51.92 -0.35 1.36 16 4 C -0.12 -1.35 2.84 -89.81 -0.25 -1.60 16 5 C -0.13 -1.36 7.56 -25.92 -0.20 -1.56 16 6 C -0.14 -1.49 8.08 -25.92 -0.21 -1.69 16 7 C -0.13 -1.63 7.51 -25.92 -0.19 -1.82 16 8 N -0.63 -9.67 2.63 -173.93 -0.46 -10.13 16 9 C 0.08 0.98 9.52 59.85 0.57 1.55 16 10 C 0.52 10.41 7.42 -10.99 -0.08 10.33 16 11 O -0.50 -12.42 14.31 5.55 0.08 -12.34 16 12 C -0.12 -2.33 3.53 -27.88 -0.10 -2.43 16 13 C 0.08 1.93 1.65 -92.92 -0.15 1.78 16 14 H 0.07 1.95 7.01 -51.93 -0.36 1.59 16 15 C -0.49 -13.25 6.27 -34.44 -0.22 -13.47 16 16 H 0.05 1.31 7.82 -52.49 -0.41 0.90 16 17 C 0.08 2.23 5.45 -17.82 -0.10 2.14 16 18 N -0.88 -26.18 12.88 55.43 0.71 -25.47 16 19 Si 0.89 22.48 29.54 -169.99 -5.02 17.46 16 20 H -0.28 -7.11 7.11 56.52 0.40 -6.71 16 21 H -0.29 -7.30 7.11 56.52 0.40 -6.90 16 22 H -0.28 -6.95 7.11 56.52 0.40 -6.55 16 23 C -0.02 -0.43 4.77 -104.62 -0.50 -0.93 16 24 C -0.12 -2.54 9.67 -39.58 -0.38 -2.92 16 25 C -0.13 -2.40 10.05 -39.58 -0.40 -2.80 16 26 C -0.16 -2.75 10.05 -39.58 -0.40 -3.15 16 27 C -0.13 -2.41 10.05 -39.58 -0.40 -2.80 16 28 C -0.11 -2.32 8.89 -39.58 -0.35 -2.67 16 29 H 0.05 0.54 6.87 -51.93 -0.36 0.19 16 30 H 0.06 0.65 8.14 -51.93 -0.42 0.22 16 31 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 32 H 0.09 0.89 8.02 -51.93 -0.42 0.47 16 33 H 0.08 0.91 8.04 -51.93 -0.42 0.49 16 34 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 35 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 36 H 0.06 0.67 8.14 -51.93 -0.42 0.24 16 37 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 38 H 0.08 1.31 8.10 -51.92 -0.42 0.89 16 39 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 40 H 0.06 0.60 6.53 -51.93 -0.34 0.26 16 41 H 0.07 0.81 6.44 -51.93 -0.33 0.47 16 42 H 0.07 1.37 7.19 -51.93 -0.37 1.00 16 43 H 0.06 1.11 8.11 -51.93 -0.42 0.69 16 44 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 45 H 0.11 2.41 7.95 -52.49 -0.42 2.00 16 46 H 0.10 1.68 8.06 -52.48 -0.42 1.26 16 47 H 0.10 1.52 8.06 -52.49 -0.42 1.10 16 48 H 0.10 1.61 8.06 -52.49 -0.42 1.18 16 49 H 0.11 2.24 7.83 -52.49 -0.41 1.83 16 LS Contribution 391.55 15.07 5.90 5.90 Total: -1.00 -31.66 391.55 -10.37 -42.03 By element: Atomic # 1 Polarization: 12.67 SS G_CDS: -8.40 Total: 4.27 kcal Atomic # 6 Polarization: -18.54 SS G_CDS: -3.18 Total: -21.72 kcal Atomic # 7 Polarization: -35.85 SS G_CDS: 0.26 Total: -35.60 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: 0.08 Total: -12.34 kcal Atomic # 14 Polarization: 22.48 SS G_CDS: -5.02 Total: 17.46 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -31.66 -10.37 -42.03 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000356692289.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.790 kcal (2) G-P(sol) polarization free energy of solvation -31.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.026 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.764 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds