Wall clock time and date at job start Tue Mar 31 2020 11:07:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09009 * 109.46891 * 2 1 4 4 C 1.52992 * 109.47400 * 240.00311 * 2 1 3 5 5 C 1.53005 * 109.47413 * 176.93348 * 4 2 1 6 6 C 1.52991 * 109.47358 * 173.38244 * 5 4 2 7 7 C 1.53000 * 109.47068 * 179.97438 * 6 5 4 8 8 C 1.53004 * 109.47476 * 300.00113 * 7 6 5 9 9 C 1.53002 * 109.46608 * 59.99613 * 8 7 6 10 10 C 1.52999 * 109.47396 * 299.99988 * 9 8 7 11 11 C 1.50696 * 109.47396 * 119.99799 * 2 1 3 12 12 O 1.21277 * 119.99859 * 99.64719 * 11 2 1 13 13 N 1.34782 * 119.99984 * 279.65875 * 11 2 1 14 14 C 1.37140 * 120.00218 * 5.04883 * 13 11 2 15 15 H 1.07999 * 120.00204 * 302.88472 * 14 13 11 16 16 C 1.38884 * 119.99856 * 122.87917 * 14 13 11 17 17 N 1.31422 * 120.00269 * 171.77492 * 16 14 13 18 18 Si 1.86804 * 120.00258 * 351.77721 * 16 14 13 19 19 H 1.48494 * 109.47311 * 93.22891 * 18 16 14 20 20 H 1.48500 * 109.47438 * 213.23500 * 18 16 14 21 21 H 1.48506 * 109.46885 * 333.23493 * 18 16 14 22 22 C 1.39787 * 119.99615 * 185.05577 * 13 11 2 23 23 C 1.38961 * 120.08056 * 7.56021 * 22 13 11 24 24 C 1.38081 * 119.92127 * 179.74040 * 23 22 13 25 25 C 1.38311 * 120.07898 * 0.53777 * 24 23 22 26 26 C 1.38311 * 120.15243 * 359.71175 * 25 24 23 27 27 C 1.38074 * 120.07987 * 0.03183 * 26 25 24 28 28 H 1.08998 * 109.47397 * 297.32972 * 1 2 3 29 29 H 1.09006 * 109.47050 * 57.33197 * 1 2 3 30 30 H 1.09005 * 109.47053 * 177.32634 * 1 2 3 31 31 H 1.09007 * 109.47446 * 56.93556 * 4 2 1 32 32 H 1.09001 * 109.47150 * 296.93408 * 4 2 1 33 33 H 1.09002 * 109.46477 * 53.38117 * 5 4 2 34 34 H 1.09002 * 109.47430 * 60.00456 * 6 5 4 35 35 H 1.08996 * 109.47436 * 300.00344 * 6 5 4 36 36 H 1.09005 * 109.47043 * 180.02562 * 7 6 5 37 37 H 1.09003 * 109.46803 * 60.00492 * 7 6 5 38 38 H 1.08994 * 109.47341 * 179.97438 * 8 7 6 39 39 H 1.08998 * 109.46793 * 300.00362 * 8 7 6 40 40 H 1.08998 * 109.46932 * 60.00834 * 9 8 7 41 41 H 1.09003 * 109.46670 * 180.02562 * 9 8 7 42 42 H 1.08993 * 109.47104 * 300.00511 * 10 9 8 43 43 H 1.08996 * 109.46791 * 179.97438 * 10 9 8 44 44 H 0.96997 * 120.00311 * 180.02562 * 17 16 14 45 45 H 1.08000 * 120.03667 * 0.02562 * 23 22 13 46 46 H 1.08000 * 119.96350 * 180.24889 * 24 23 22 47 47 H 1.07995 * 119.92549 * 179.70172 * 25 24 23 48 48 H 1.08003 * 119.95907 * 180.02562 * 26 25 24 49 49 H 1.08008 * 120.04168 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0278 0.0000 4 6 2.0400 -0.7211 -1.2492 5 6 3.5682 -0.6546 -1.2884 6 6 4.0866 -1.5131 -2.4438 7 6 5.6146 -1.4461 -2.4833 8 6 6.0564 0.0045 -2.6875 9 6 5.5379 0.8629 -1.5320 10 6 4.0099 0.7959 -1.4925 11 6 2.0324 -0.7103 1.2304 12 8 2.4005 -1.8636 1.1570 13 7 2.0724 -0.0641 2.4125 14 6 1.5605 1.2038 2.5186 15 1 1.9338 1.9919 1.8816 16 6 0.5619 1.4742 3.4452 17 7 0.1847 2.7143 3.6617 18 14 -0.2449 0.0752 4.3840 19 1 0.4599 -0.1257 5.6755 20 1 -1.6684 0.4092 4.6435 21 1 -0.1676 -1.1704 3.5790 22 6 2.6359 -0.6862 3.5304 23 6 3.2945 -1.9020 3.3927 24 6 3.8545 -2.5110 4.4983 25 6 3.7509 -1.9177 5.7434 26 6 3.0917 -0.7101 5.8848 27 6 2.5338 -0.0929 4.7829 28 1 -0.3634 0.4718 0.9129 29 1 -0.3633 0.5547 -0.8652 30 1 -0.3633 -1.0266 -0.0479 31 1 1.6326 -0.2400 -2.1384 32 1 1.7223 -1.7635 -1.2222 33 1 3.9722 -1.0290 -0.3478 34 1 3.6825 -1.1388 -3.3844 35 1 3.7715 -2.5464 -2.2986 36 1 5.9839 -2.0573 -3.3068 37 1 6.0191 -1.8202 -1.5428 38 1 7.1450 0.0523 -2.7152 39 1 5.6518 0.3785 -3.6279 40 1 5.9424 0.4889 -0.5915 41 1 5.8523 1.8964 -1.6777 42 1 3.6054 1.1699 -2.4330 43 1 3.6406 1.4071 -0.6691 44 1 -0.5125 2.9032 4.3091 45 1 3.3722 -2.3679 2.4215 46 1 4.3700 -3.4540 4.3914 47 1 4.1857 -2.3986 6.6071 48 1 3.0130 -0.2494 6.8585 49 1 2.0188 0.8499 4.8941 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000510794439.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:07:45 Heat of formation + Delta-G solvation = -22.144092 kcal Electronic energy + Delta-G solvation = -28083.527801 eV Core-core repulsion = 24588.792414 eV Total energy + Delta-G solvation = -3494.735387 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 315.194 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.29460 -38.66674 -37.48955 -35.15065 -34.21822 -32.23040 -30.88912 -30.50392 -30.11950 -28.87846 -25.74950 -25.30927 -23.47280 -22.41532 -21.79031 -21.27918 -20.47148 -19.51412 -19.04748 -17.78300 -16.54229 -15.79303 -15.55647 -15.33203 -14.54123 -14.39857 -14.03544 -13.97860 -13.89573 -13.77697 -13.39517 -12.96440 -12.85204 -12.79664 -12.64518 -12.20165 -12.16664 -12.00100 -11.83276 -11.49343 -11.34765 -11.30972 -10.98385 -10.95749 -10.79469 -10.70736 -10.61061 -10.45516 -10.21509 -10.10793 -9.93183 -9.71446 -9.56973 -9.48098 -8.94767 -8.34903 -8.01137 -7.00578 -6.55442 -4.50901 2.06949 2.17891 3.11006 3.21714 3.31042 3.57912 4.04022 4.18271 4.61662 4.80768 4.82817 4.90413 4.94460 5.25307 5.37667 5.53494 5.53936 5.56941 5.61960 5.69243 5.71158 5.72593 5.80926 5.85324 5.89701 5.93239 6.05538 6.09636 6.16775 6.20086 6.28335 6.30462 6.31527 6.37737 6.40265 6.43589 6.44454 6.49663 6.57643 6.59610 6.79335 6.84121 6.86308 6.91725 7.18280 7.26463 7.31353 7.38991 7.74170 8.01819 8.18043 8.78738 9.09564 9.40246 10.46825 Molecular weight = 315.19amu Principal moments of inertia in cm(-1) A = 0.013890 B = 0.005281 C = 0.004479 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2015.396540 B = 5300.346806 C = 6250.327636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.091 4.091 3 H 0.098 0.902 4 C -0.097 4.097 5 C -0.089 4.089 6 C -0.109 4.109 7 C -0.119 4.119 8 C -0.117 4.117 9 C -0.120 4.120 10 C -0.117 4.117 11 C 0.509 3.491 12 O -0.557 6.557 13 N -0.412 5.412 14 C -0.361 4.361 15 H 0.108 0.892 16 C 0.082 3.918 17 N -0.858 5.858 18 Si 0.865 3.135 19 H -0.251 1.251 20 H -0.288 1.288 21 H -0.262 1.262 22 C 0.159 3.841 23 C -0.181 4.181 24 C -0.111 4.111 25 C -0.171 4.171 26 C -0.106 4.106 27 C -0.160 4.160 28 H 0.076 0.924 29 H 0.056 0.944 30 H 0.047 0.953 31 H 0.061 0.939 32 H 0.068 0.932 33 H 0.078 0.922 34 H 0.056 0.944 35 H 0.060 0.940 36 H 0.055 0.945 37 H 0.060 0.940 38 H 0.055 0.945 39 H 0.058 0.942 40 H 0.060 0.940 41 H 0.057 0.943 42 H 0.057 0.943 43 H 0.066 0.934 44 H 0.278 0.722 45 H 0.174 0.826 46 H 0.111 0.889 47 H 0.107 0.893 48 H 0.112 0.888 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.688 -4.443 -7.479 10.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.112 4.112 3 H 0.116 0.884 4 C -0.135 4.135 5 C -0.107 4.107 6 C -0.147 4.147 7 C -0.157 4.157 8 C -0.154 4.154 9 C -0.157 4.157 10 C -0.154 4.154 11 C 0.302 3.698 12 O -0.440 6.440 13 N -0.121 5.121 14 C -0.488 4.488 15 H 0.125 0.875 16 C -0.127 4.127 17 N -0.492 5.492 18 Si 0.690 3.310 19 H -0.176 1.176 20 H -0.215 1.215 21 H -0.186 1.186 22 C 0.063 3.937 23 C -0.201 4.201 24 C -0.129 4.129 25 C -0.190 4.190 26 C -0.125 4.125 27 C -0.180 4.180 28 H 0.095 0.905 29 H 0.075 0.925 30 H 0.066 0.934 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.097 0.903 34 H 0.075 0.925 35 H 0.078 0.922 36 H 0.074 0.926 37 H 0.079 0.921 38 H 0.073 0.927 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.076 0.924 42 H 0.076 0.924 43 H 0.085 0.915 44 H 0.089 0.911 45 H 0.190 0.810 46 H 0.129 0.871 47 H 0.125 0.875 48 H 0.130 0.870 49 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 5.693 -4.798 -7.501 10.569 hybrid contribution -0.551 -0.324 0.857 1.069 sum 5.142 -5.122 -6.644 9.840 Atomic orbital electron populations 1.21648 0.93378 1.01279 1.03166 1.21068 0.97328 1.00965 0.91801 0.88389 1.21528 0.94847 1.00999 0.96125 1.21199 0.95359 0.94878 0.99281 1.21526 0.94946 0.99857 0.98358 1.21528 0.96391 0.96358 1.01381 1.21521 0.99709 0.95577 0.98629 1.21524 0.96343 0.99229 0.98609 1.21655 0.95099 0.96964 1.01719 1.20981 0.77807 0.85587 0.85441 1.90243 1.50207 1.17790 1.85765 1.41461 1.49490 1.15120 1.06032 1.18921 1.19937 0.84409 1.25515 0.87506 1.25490 0.94880 0.96234 0.96069 1.69663 1.28627 1.18183 1.32692 0.87250 0.78384 0.83038 0.82281 1.17569 1.21516 1.18608 1.18535 0.93551 0.93172 0.88450 1.22553 0.99422 0.95980 1.02106 1.20981 0.99846 0.99306 0.92804 1.20893 1.03784 0.97173 0.97186 1.20803 0.98384 0.95597 0.97726 1.21228 1.03290 1.02208 0.91317 0.90520 0.92513 0.93436 0.92024 0.91308 0.90317 0.92533 0.92160 0.92630 0.92079 0.92652 0.92348 0.92100 0.92420 0.92378 0.91488 0.91113 0.80995 0.87086 0.87455 0.87023 0.84273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.43 9.09 37.16 0.34 -2.09 16 2 C -0.09 -1.66 1.89 -91.78 -0.17 -1.83 16 3 H 0.10 1.83 5.43 -51.92 -0.28 1.54 16 4 C -0.10 -1.50 3.81 -26.73 -0.10 -1.61 16 5 C -0.09 -1.32 2.00 -90.62 -0.18 -1.50 16 6 C -0.11 -1.39 5.20 -26.74 -0.14 -1.53 16 7 C -0.12 -1.39 5.92 -26.73 -0.16 -1.55 16 8 C -0.12 -1.31 5.92 -26.73 -0.16 -1.46 16 9 C -0.12 -1.52 5.92 -26.73 -0.16 -1.68 16 10 C -0.12 -1.63 4.99 -26.73 -0.13 -1.76 16 11 C 0.51 11.13 5.94 -10.99 -0.07 11.06 16 12 O -0.56 -12.61 11.43 5.56 0.06 -12.55 16 13 N -0.41 -9.76 2.12 -58.98 -0.13 -9.88 16 14 C -0.36 -8.96 7.05 -14.94 -0.11 -9.07 16 15 H 0.11 2.77 7.42 -52.49 -0.39 2.38 16 16 C 0.08 2.09 4.16 -17.49 -0.07 2.02 16 17 N -0.86 -22.56 13.96 55.49 0.77 -21.79 16 18 Si 0.86 20.65 24.08 -169.99 -4.09 16.56 16 19 H -0.25 -5.81 5.79 56.52 0.33 -5.48 16 20 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 21 H -0.26 -6.66 7.11 56.52 0.40 -6.25 16 22 C 0.16 3.76 5.23 -83.69 -0.44 3.32 16 23 C -0.18 -3.97 8.98 -39.37 -0.35 -4.32 16 24 C -0.11 -2.11 10.04 -39.61 -0.40 -2.50 16 25 C -0.17 -3.13 10.04 -39.53 -0.40 -3.53 16 26 C -0.11 -2.12 9.88 -39.61 -0.39 -2.51 16 27 C -0.16 -3.67 5.73 -39.37 -0.23 -3.89 16 28 H 0.08 1.56 7.03 -51.93 -0.37 1.20 16 29 H 0.06 0.85 8.14 -51.93 -0.42 0.42 16 30 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 31 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 32 H 0.07 1.12 7.78 -51.93 -0.40 0.72 16 33 H 0.08 1.41 6.42 -51.93 -0.33 1.07 16 34 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 35 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 36 H 0.05 0.57 8.14 -51.93 -0.42 0.15 16 37 H 0.06 0.77 8.14 -51.93 -0.42 0.34 16 38 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 39 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 40 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 41 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 42 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 43 H 0.07 1.04 6.55 -51.93 -0.34 0.70 16 44 H 0.28 6.90 8.31 -40.82 -0.34 6.56 16 45 H 0.17 3.86 4.70 -55.33 -0.26 3.60 16 46 H 0.11 1.77 8.06 -52.49 -0.42 1.35 16 47 H 0.11 1.61 8.06 -52.49 -0.42 1.19 16 48 H 0.11 1.94 8.06 -52.48 -0.42 1.51 16 49 H 0.14 3.38 4.47 -52.48 -0.23 3.15 16 LS Contribution 363.40 15.07 5.48 5.48 Total: -1.00 -26.76 363.40 -9.38 -36.14 By element: Atomic # 1 Polarization: 18.63 SS G_CDS: -8.16 Total: 10.47 kcal Atomic # 6 Polarization: -21.12 SS G_CDS: -3.31 Total: -24.43 kcal Atomic # 7 Polarization: -32.32 SS G_CDS: 0.65 Total: -31.67 kcal Atomic # 8 Polarization: -12.61 SS G_CDS: 0.06 Total: -12.55 kcal Atomic # 14 Polarization: 20.65 SS G_CDS: -4.09 Total: 16.56 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -26.76 -9.38 -36.14 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000510794439.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.996 kcal (2) G-P(sol) polarization free energy of solvation -26.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds