Wall clock time and date at job start Tue Mar 31 2020 11:27:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46907 * 109.47405 * 2 1 4 4 C 1.46903 * 110.99642 * 297.01801 * 3 2 1 5 5 C 1.52998 * 109.47279 * 288.24585 * 4 3 2 6 6 C 1.46898 * 110.99744 * 60.97238 * 3 2 1 7 7 C 1.52998 * 109.47087 * 66.04619 * 6 3 2 8 8 H 1.08993 * 109.47395 * 299.99549 * 7 6 3 9 9 F 1.39894 * 109.47046 * 60.00315 * 7 6 3 10 10 C 1.50708 * 109.46605 * 179.97438 * 7 6 3 11 11 O 1.21277 * 120.00154 * 314.99788 * 10 7 6 12 12 N 1.34777 * 119.99777 * 135.00403 * 10 7 6 13 13 C 1.46494 * 119.99922 * 179.97438 * 12 10 7 14 14 H 1.08998 * 110.78118 * 323.20859 * 13 12 10 15 15 C 1.55162 * 110.72204 * 86.45233 * 13 12 10 16 16 C 1.54912 * 101.61577 * 153.84456 * 15 13 12 17 17 N 1.47465 * 104.81361 * 323.04594 * 16 15 13 18 18 C 1.36942 * 125.62749 * 204.05403 * 17 16 15 19 19 H 1.08000 * 119.99892 * 180.02562 * 18 17 16 20 20 C 1.38810 * 120.00089 * 0.02562 * 18 17 16 21 21 N 1.31625 * 119.99826 * 0.02562 * 20 18 17 22 22 Si 1.86797 * 120.00170 * 180.02562 * 20 18 17 23 23 H 1.48502 * 109.46871 * 0.02562 * 22 20 18 24 24 H 1.48502 * 109.47032 * 119.99673 * 22 20 18 25 25 H 1.48494 * 109.47438 * 240.00067 * 22 20 18 26 26 C 1.47021 * 108.72478 * 24.06576 * 17 16 15 27 27 H 1.08997 * 110.01557 * 239.48892 * 26 17 16 28 28 C 1.53005 * 109.88201 * 118.39463 * 26 17 16 29 29 H 1.08995 * 109.47090 * 301.31066 * 1 2 3 30 30 H 1.09002 * 109.47203 * 61.30526 * 1 2 3 31 31 H 1.08991 * 109.47373 * 181.30893 * 1 2 3 32 32 H 1.09008 * 109.47140 * 239.99769 * 2 1 3 33 33 H 1.08998 * 109.47333 * 120.00101 * 2 1 3 34 34 H 1.09001 * 109.46933 * 48.24646 * 4 3 2 35 35 H 1.09001 * 109.46293 * 168.24771 * 4 3 2 36 36 H 1.08993 * 109.47410 * 179.85111 * 5 4 3 37 37 H 1.09005 * 109.46835 * 299.85320 * 5 4 3 38 38 H 1.08995 * 109.47157 * 59.84699 * 5 4 3 39 39 H 1.09001 * 109.46875 * 306.04624 * 6 3 2 40 40 H 1.08999 * 109.46973 * 186.05250 * 6 3 2 41 41 H 0.97002 * 119.99773 * 359.97438 * 12 10 7 42 42 H 1.09000 * 110.99973 * 271.93858 * 15 13 12 43 43 H 1.08998 * 111.00087 * 35.75236 * 15 13 12 44 44 H 1.09004 * 110.36663 * 81.84798 * 16 15 13 45 45 H 1.09001 * 110.36443 * 204.16610 * 16 15 13 46 46 H 0.96996 * 119.99794 * 180.02562 * 21 20 18 47 47 H 1.09003 * 109.46624 * 302.19791 * 28 26 17 48 48 H 1.09004 * 109.46729 * 62.18977 * 28 26 17 49 49 H 1.08999 * 109.46981 * 182.19690 * 28 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3850 0.0000 4 6 1.6078 2.0890 -1.2218 5 6 2.4055 1.5535 -2.4125 6 6 1.5678 2.1031 1.1992 7 6 2.2194 1.4866 2.4386 8 1 1.9348 0.4373 2.5148 9 9 3.6107 1.5860 2.3323 10 6 1.7561 2.2239 3.6688 11 8 1.7249 3.4362 3.6734 12 7 1.3767 1.5358 4.7638 13 6 0.9270 2.2524 5.9597 14 1 1.5027 3.1669 6.1020 15 6 -0.5900 2.5664 5.8736 16 6 -0.9759 2.6546 7.3713 17 7 -0.1649 1.6147 8.0314 18 6 -0.4678 0.9998 9.2169 19 1 0.1940 0.2472 9.6193 20 6 -1.6255 1.3437 9.9013 21 7 -2.4323 2.2606 9.4105 22 14 -2.0383 0.5054 11.5187 23 1 -0.9777 -0.4796 11.8505 24 1 -2.1222 1.5235 12.5966 25 1 -3.3426 -0.1936 11.3953 26 6 1.0224 1.3478 7.2065 27 1 1.0390 0.3007 6.9043 28 6 2.2901 1.6815 7.9957 29 1 -0.3633 0.5340 0.8780 30 1 -0.3634 0.4934 -0.9015 31 1 -0.3633 -1.0273 0.0235 32 1 1.8933 -0.5139 -0.8900 33 1 1.8933 -0.5138 0.8899 34 1 0.5440 1.9255 -1.3942 35 1 1.7977 3.1562 -1.1076 36 1 2.0981 2.0740 -3.3194 37 1 3.4692 1.7193 -2.2413 38 1 2.2178 0.4858 -2.5249 39 1 0.4837 2.0257 1.2820 40 1 1.8523 3.1526 1.1230 41 1 1.4015 0.5661 4.7600 42 1 -0.7642 3.5166 5.3686 43 1 -1.1287 1.7586 5.3783 44 1 -0.7278 3.6384 7.7697 45 1 -2.0382 2.4483 7.5021 46 1 -3.2410 2.5012 9.8889 47 1 2.2582 2.7247 8.3099 48 1 2.3507 1.0391 8.8742 49 1 3.1641 1.5183 7.3651 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001692166324.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:27:46 Heat of formation + Delta-G solvation = -53.750294 kcal Electronic energy + Delta-G solvation = -27597.857096 eV Core-core repulsion = 23703.274688 eV Total energy + Delta-G solvation = -3894.582408 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 315.206 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -47.83253 -39.79609 -38.68185 -37.56414 -34.16712 -32.43200 -31.97256 -31.25068 -30.43027 -29.01709 -28.05266 -25.24098 -24.49244 -24.04630 -23.11258 -20.78915 -20.25852 -20.11223 -19.63393 -17.87623 -17.03906 -16.76423 -16.27161 -15.99555 -15.78631 -15.39565 -14.76200 -14.52778 -14.25715 -14.07652 -13.92858 -13.56569 -13.45816 -13.39624 -12.86452 -12.77454 -12.49747 -12.37152 -12.19752 -12.09976 -12.00384 -11.72760 -11.61826 -11.52097 -11.18722 -11.09074 -10.90561 -10.88459 -10.80225 -10.59928 -10.47076 -10.10486 -9.84386 -9.70614 -9.57370 -8.79709 -8.69014 -8.63492 -6.92513 -5.70054 -3.13092 2.44509 2.91681 3.36423 3.42054 3.44490 3.62436 4.21429 4.41630 4.45003 4.51625 4.57847 4.74906 4.82736 4.91103 4.97776 5.10554 5.20685 5.23007 5.29060 5.36148 5.37875 5.47731 5.54569 5.58066 5.60641 5.67359 5.69853 5.74917 5.81861 5.99107 6.06409 6.16524 6.24639 6.29011 6.45669 6.53352 6.63763 6.64902 6.72103 6.81119 7.02891 7.44753 7.52608 7.58432 7.80096 8.14508 8.30058 9.15963 9.76765 10.40104 11.33444 Molecular weight = 315.21amu Principal moments of inertia in cm(-1) A = 0.025465 B = 0.002685 C = 0.002603 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1099.282027 B =10427.304386 C =10753.004943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.040 3.960 3 N -0.531 5.531 4 C 0.046 3.954 5 C -0.146 4.146 6 C 0.034 3.966 7 C 0.091 3.909 8 H 0.095 0.905 9 F -0.181 7.181 10 C 0.491 3.509 11 O -0.522 6.522 12 N -0.705 5.705 13 C 0.133 3.867 14 H 0.093 0.907 15 C -0.152 4.152 16 C 0.153 3.847 17 N -0.595 5.595 18 C -0.220 4.220 19 H 0.079 0.921 20 C -0.011 4.011 21 N -0.921 5.921 22 Si 0.914 3.086 23 H -0.280 1.280 24 H -0.290 1.290 25 H -0.290 1.290 26 C 0.156 3.844 27 H 0.036 0.964 28 C -0.156 4.156 29 H 0.060 0.940 30 H 0.059 0.941 31 H 0.065 0.935 32 H 0.081 0.919 33 H 0.076 0.924 34 H 0.042 0.958 35 H 0.075 0.925 36 H 0.057 0.943 37 H 0.063 0.937 38 H 0.054 0.946 39 H 0.062 0.938 40 H 0.100 0.900 41 H 0.400 0.600 42 H 0.062 0.938 43 H 0.061 0.939 44 H 0.015 0.985 45 H 0.110 0.890 46 H 0.252 0.748 47 H 0.052 0.948 48 H 0.055 0.945 49 H 0.039 0.961 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.076 -4.294 -20.579 22.181 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.257 4.257 2 C -0.088 4.088 3 N -0.255 5.255 4 C -0.082 4.082 5 C -0.204 4.204 6 C -0.095 4.095 7 C 0.051 3.949 8 H 0.113 0.887 9 F -0.162 7.162 10 C 0.273 3.727 11 O -0.398 6.398 12 N -0.355 5.355 13 C 0.028 3.972 14 H 0.111 0.889 15 C -0.192 4.192 16 C 0.028 3.972 17 N -0.320 5.320 18 C -0.348 4.348 19 H 0.096 0.904 20 C -0.206 4.206 21 N -0.569 5.569 22 Si 0.745 3.255 23 H -0.205 1.205 24 H -0.217 1.217 25 H -0.218 1.218 26 C 0.048 3.952 27 H 0.054 0.946 28 C -0.216 4.216 29 H 0.079 0.921 30 H 0.078 0.922 31 H 0.084 0.916 32 H 0.100 0.900 33 H 0.094 0.906 34 H 0.060 0.940 35 H 0.093 0.907 36 H 0.076 0.924 37 H 0.082 0.918 38 H 0.073 0.927 39 H 0.080 0.920 40 H 0.118 0.882 41 H 0.234 0.766 42 H 0.081 0.919 43 H 0.080 0.920 44 H 0.033 0.967 45 H 0.127 0.873 46 H 0.063 0.937 47 H 0.071 0.929 48 H 0.074 0.926 49 H 0.058 0.942 Dipole moment (debyes) X Y Z Total from point charges 7.437 -3.413 -20.385 21.966 hybrid contribution -0.992 -0.855 0.936 1.610 sum 6.445 -4.268 -19.449 20.929 Atomic orbital electron populations 1.22461 0.98000 1.02851 1.02358 1.22304 0.93065 0.90205 1.03237 1.62186 1.59516 1.02265 1.01525 1.22148 0.97840 0.98608 0.89584 1.21759 1.01181 1.00960 0.96474 1.22564 0.98547 0.99900 0.88507 1.21501 0.78003 1.01248 0.94115 0.88709 1.92896 1.28853 1.97567 1.96869 1.20795 0.78569 0.88555 0.84772 1.90729 1.52775 1.13534 1.82718 1.46149 1.65516 1.10310 1.13570 1.22239 0.96205 0.95602 0.83109 0.88855 1.23401 0.93955 1.00603 1.01234 1.21966 0.99946 0.90696 0.84607 1.44507 1.20251 1.44588 1.22677 1.19071 1.04421 1.15765 0.95571 0.90362 1.24796 0.97499 0.99090 0.99229 1.69802 1.14241 1.34009 1.38864 0.86002 0.77923 0.78494 0.83082 1.20528 1.21746 1.21751 1.20982 0.88985 0.95583 0.89678 0.94604 1.22255 0.97027 1.01959 1.00352 0.92144 0.92174 0.91634 0.90039 0.90558 0.93986 0.90671 0.92352 0.91760 0.92739 0.92002 0.88210 0.76555 0.91910 0.91992 0.96681 0.87261 0.93712 0.92864 0.92610 0.94240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.40 9.28 37.16 0.34 -1.05 16 2 C 0.04 0.30 5.70 -3.82 -0.02 0.28 16 3 N -0.53 -4.88 4.59 -234.62 -1.08 -5.95 16 4 C 0.05 0.36 5.56 -3.82 -0.02 0.34 16 5 C -0.15 -0.98 9.96 37.16 0.37 -0.61 16 6 C 0.03 0.35 4.26 -3.83 -0.02 0.33 16 7 C 0.09 1.04 3.65 -27.88 -0.10 0.94 16 8 H 0.10 0.81 6.39 -51.93 -0.33 0.48 16 9 F -0.18 -2.46 16.99 2.25 0.04 -2.43 16 10 C 0.49 7.12 7.17 -10.98 -0.08 7.04 16 11 O -0.52 -9.52 16.24 5.56 0.09 -9.43 16 12 N -0.70 -9.95 5.20 -52.03 -0.27 -10.22 16 13 C 0.13 2.35 2.76 -66.09 -0.18 2.17 16 14 H 0.09 1.80 7.41 -51.93 -0.38 1.41 16 15 C -0.15 -2.93 6.76 -24.58 -0.17 -3.09 16 16 C 0.15 3.65 5.89 -2.51 -0.01 3.63 16 17 N -0.60 -14.50 3.13 -162.53 -0.51 -15.01 16 18 C -0.22 -5.88 9.89 -15.06 -0.15 -6.03 16 19 H 0.08 2.03 7.83 -52.49 -0.41 1.61 16 20 C -0.01 -0.29 5.49 -17.43 -0.10 -0.39 16 21 N -0.92 -26.28 10.09 55.49 0.56 -25.72 16 22 Si 0.91 21.62 29.55 -169.99 -5.02 16.59 16 23 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 24 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 25 H -0.29 -6.91 7.11 56.52 0.40 -6.50 16 26 C 0.16 3.05 3.48 -66.95 -0.23 2.81 16 27 H 0.04 0.68 7.68 -51.93 -0.40 0.28 16 28 C -0.16 -2.87 9.13 37.16 0.34 -2.53 16 29 H 0.06 0.48 6.23 -51.93 -0.32 0.15 16 30 H 0.06 0.42 6.30 -51.93 -0.33 0.09 16 31 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 32 H 0.08 0.55 6.58 -51.92 -0.34 0.21 16 33 H 0.08 0.56 6.43 -51.93 -0.33 0.23 16 34 H 0.04 0.31 5.91 -51.93 -0.31 0.00 16 35 H 0.07 0.61 7.81 -51.93 -0.41 0.20 16 36 H 0.06 0.32 8.14 -51.93 -0.42 -0.10 16 37 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 38 H 0.05 0.34 6.70 -51.93 -0.35 0.00 16 39 H 0.06 0.61 6.00 -51.93 -0.31 0.30 16 40 H 0.10 1.18 7.63 -51.93 -0.40 0.79 16 41 H 0.40 4.55 8.20 -40.82 -0.33 4.21 16 42 H 0.06 1.18 8.14 -51.93 -0.42 0.75 16 43 H 0.06 1.15 8.14 -51.93 -0.42 0.72 16 44 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 45 H 0.11 2.92 5.88 -51.93 -0.31 2.62 16 46 H 0.25 6.99 8.31 -40.82 -0.34 6.65 16 47 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 48 H 0.05 1.05 8.04 -51.93 -0.42 0.63 16 49 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 LS Contribution 380.55 15.07 5.73 5.73 Total: -1.00 -30.92 380.55 -8.68 -39.60 By element: Atomic # 1 Polarization: 11.18 SS G_CDS: -8.20 Total: 2.98 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: -0.03 Total: 3.85 kcal Atomic # 7 Polarization: -55.60 SS G_CDS: -1.30 Total: -56.90 kcal Atomic # 8 Polarization: -9.52 SS G_CDS: 0.09 Total: -9.43 kcal Atomic # 9 Polarization: -2.46 SS G_CDS: 0.04 Total: -2.43 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.59 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -30.92 -8.68 -39.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001692166324.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.148 kcal (2) G-P(sol) polarization free energy of solvation -30.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds