Wall clock time and date at job start Tue Mar 31 2020 10:54:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38289 * 119.93951 * 2 1 4 4 C 1.38139 * 120.07948 * 180.27706 * 3 2 1 5 5 C 1.38723 * 119.95543 * 359.42216 * 4 3 2 6 6 O 1.35932 * 120.05766 * 180.29524 * 5 4 3 7 7 C 1.34709 * 117.00180 * 266.04662 * 6 5 4 8 8 O 1.21474 * 120.00293 * 6.40010 * 7 6 5 9 9 C 1.47757 * 119.99970 * 186.40518 * 7 6 5 10 10 C 1.39973 * 120.03056 * 359.72817 * 9 7 6 11 11 C 1.38310 * 120.35278 * 179.69707 * 10 9 7 12 12 C 1.37764 * 120.42055 * 0.60060 * 11 10 9 13 13 C 1.40753 * 120.04665 * 359.67717 * 12 11 10 14 14 C 1.41450 * 120.17526 * 180.02562 * 13 12 11 15 15 H 1.07998 * 119.99682 * 26.03432 * 14 13 12 16 16 C 1.39934 * 120.00039 * 206.03649 * 14 13 12 17 17 N 1.30832 * 119.99961 * 15.40910 * 16 14 13 18 18 Si 1.86793 * 119.99967 * 195.40590 * 16 14 13 19 19 H 1.48508 * 109.47041 * 359.97438 * 18 16 14 20 20 H 1.48500 * 109.47514 * 120.00158 * 18 16 14 21 21 H 1.48500 * 109.47132 * 240.00201 * 18 16 14 22 22 C 1.39058 * 120.03200 * 179.97438 * 9 7 6 23 23 C 1.38825 * 119.87764 * 0.55801 * 5 4 3 24 24 Cl 1.73601 * 120.03658 * 179.72447 * 23 5 4 25 25 C 1.38242 * 119.94175 * 179.97438 * 2 1 3 26 26 H 1.08998 * 109.47469 * 90.00341 * 1 2 3 27 27 H 1.09006 * 109.47196 * 209.99950 * 1 2 3 28 28 H 1.08999 * 109.47530 * 330.00166 * 1 2 3 29 29 H 1.08003 * 119.95357 * 359.97438 * 3 2 1 30 30 H 1.08002 * 120.01700 * 179.70201 * 4 3 2 31 31 H 1.08000 * 119.82313 * 359.96975 * 10 9 7 32 32 H 1.08000 * 119.79569 * 180.29652 * 11 10 9 33 33 H 1.07998 * 119.98001 * 179.70121 * 12 11 10 34 34 H 0.96999 * 120.00037 * 179.97438 * 17 16 14 35 35 H 1.08001 * 120.20352 * 359.97438 * 22 9 7 36 36 H 1.08001 * 119.97748 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1971 1.1983 0.0000 4 6 3.5785 1.2017 -0.0058 5 6 4.2741 0.0015 0.0005 6 8 5.6334 0.0025 0.0009 7 6 6.2455 -0.0859 -1.1959 8 8 5.5901 -0.0446 -2.2178 9 6 7.7140 -0.2333 -1.2655 10 6 8.4705 -0.2753 -0.0886 11 6 9.8448 -0.4193 -0.1459 12 6 10.4866 -0.5106 -1.3615 13 6 9.7435 -0.4645 -2.5559 14 6 10.3995 -0.5586 -3.8055 15 1 11.3493 -1.0672 -3.8798 16 6 9.8179 0.0075 -4.9455 17 7 8.8420 0.8701 -4.8223 18 14 10.4350 -0.4684 -6.6431 19 1 11.5380 -1.4540 -6.5106 20 1 9.3239 -1.0702 -7.4231 21 1 10.9344 0.7410 -7.3453 22 6 8.3464 -0.3251 -2.5006 23 6 3.5795 -1.2004 0.0009 24 17 4.4459 -2.7048 0.0016 25 6 2.1969 -1.1979 0.0005 26 1 -0.3634 -0.0001 -1.0276 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5138 29 1 1.6553 2.1327 -0.0004 30 1 4.1165 2.1382 -0.0106 31 1 7.9778 -0.1993 0.8695 32 1 10.4192 -0.4555 0.7680 33 1 11.5606 -0.6181 -1.3980 34 1 8.4391 1.2627 -5.6124 35 1 7.7673 -0.2896 -3.4115 36 1 1.6556 -2.1325 0.0005 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000740796432.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:43 Heat of formation + Delta-G solvation = -47.141265 kcal Electronic energy + Delta-G solvation = -22738.785582 eV Core-core repulsion = 19178.457455 eV Total energy + Delta-G solvation = -3560.328127 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 316.065 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.88380 -38.93647 -37.47874 -36.47798 -36.15951 -33.78531 -32.27417 -30.94589 -30.36368 -29.55121 -26.96336 -25.40262 -23.71660 -23.08520 -21.54261 -21.01091 -20.04481 -18.10767 -17.53090 -16.64333 -16.12980 -15.98377 -15.24626 -14.79136 -14.58950 -14.45211 -14.11148 -13.97669 -13.61479 -13.34723 -12.86891 -12.70855 -12.65874 -12.51472 -12.06952 -11.80628 -11.64473 -11.28973 -11.23797 -11.14693 -11.03572 -10.80118 -10.55771 -10.50984 -10.30775 -9.78027 -9.65729 -9.29911 -8.97988 -8.54691 -7.80389 -7.58475 -6.84351 -4.47988 0.88746 1.06911 1.87360 2.10560 2.73763 3.03117 3.05554 3.09277 3.10884 3.48734 3.65195 3.88549 4.53450 4.57055 4.63754 4.90403 5.02905 5.08158 5.33315 5.36251 5.49166 5.61185 5.64619 5.86688 5.93965 6.09275 6.11721 6.27185 6.35119 6.47842 6.67037 6.87993 6.91417 6.96403 7.13776 7.25858 7.62767 7.70288 7.86583 8.05681 8.40368 8.47073 8.72839 8.75296 10.10930 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.017556 B = 0.003606 C = 0.003350 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1594.555084 B = 7762.249117 C = 8356.902008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.081 4.081 3 C -0.104 4.104 4 C -0.105 4.105 5 C 0.102 3.898 6 O -0.291 6.291 7 C 0.513 3.487 8 O -0.497 6.497 9 C -0.113 4.113 10 C -0.191 4.191 11 C -0.103 4.103 12 C -0.198 4.198 13 C 0.095 3.905 14 C -0.459 4.459 15 H 0.083 0.917 16 C 0.072 3.928 17 N -0.790 5.790 18 Si 0.912 3.088 19 H -0.259 1.259 20 H -0.271 1.271 21 H -0.273 1.273 22 C -0.084 4.084 23 C -0.039 4.039 24 Cl -0.051 7.051 25 C -0.103 4.103 26 H 0.074 0.926 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.135 0.865 30 H 0.140 0.860 31 H 0.104 0.896 32 H 0.098 0.902 33 H 0.100 0.900 34 H 0.284 0.716 35 H 0.137 0.863 36 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.071 -0.825 8.093 15.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.081 4.081 3 C -0.122 4.122 4 C -0.123 4.123 5 C 0.059 3.941 6 O -0.208 6.208 7 C 0.361 3.639 8 O -0.383 6.383 9 C -0.115 4.115 10 C -0.210 4.210 11 C -0.122 4.122 12 C -0.218 4.218 13 C 0.093 3.907 14 C -0.488 4.488 15 H 0.101 0.899 16 C -0.146 4.146 17 N -0.415 5.415 18 Si 0.736 3.264 19 H -0.183 1.183 20 H -0.196 1.196 21 H -0.199 1.199 22 C -0.103 4.103 23 C -0.066 4.066 24 Cl -0.022 7.022 25 C -0.121 4.121 26 H 0.093 0.907 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.152 0.848 30 H 0.157 0.843 31 H 0.122 0.878 32 H 0.116 0.884 33 H 0.118 0.882 34 H 0.095 0.905 35 H 0.154 0.846 36 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -13.349 -0.772 7.612 15.387 hybrid contribution 0.278 -0.182 -0.783 0.851 sum -13.072 -0.953 6.829 14.779 Atomic orbital electron populations 1.20783 0.90231 1.03060 1.02751 1.19892 0.96542 0.92316 0.99337 1.20980 0.93141 0.98089 1.00036 1.21284 0.94527 0.97201 0.99304 1.18319 0.82467 0.91717 1.01622 1.84752 1.16351 1.84700 1.34971 1.22295 0.89865 0.71918 0.79789 1.90798 1.66766 1.45938 1.34834 1.18748 0.85724 1.10932 0.96050 1.20579 0.93939 1.10860 0.95669 1.20514 0.93805 1.01141 0.96712 1.21228 0.98183 1.09991 0.92373 1.17546 0.90785 0.89513 0.92875 1.19603 1.06147 1.31548 0.91505 0.89868 1.25964 0.94001 0.92856 1.01824 1.69768 1.19807 1.19361 1.32539 0.86197 0.79796 0.79463 0.80951 1.18306 1.19578 1.19872 1.21677 0.94844 0.98814 0.95001 1.21269 0.92984 0.87147 1.05233 1.98395 1.76698 1.30457 1.96645 1.20809 0.91001 0.98985 1.01330 0.90747 0.91255 0.91139 0.84752 0.84250 0.87789 0.88381 0.88209 0.90472 0.84573 0.84445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.81 10.01 36.00 0.36 -0.45 16 2 C -0.08 -0.88 5.88 -104.61 -0.62 -1.50 16 3 C -0.10 -1.20 9.69 -39.60 -0.38 -1.58 16 4 C -0.10 -1.52 9.99 -39.44 -0.39 -1.91 16 5 C 0.10 1.77 4.93 -39.19 -0.19 1.58 16 6 O -0.29 -5.82 8.75 -24.81 -0.22 -6.04 16 7 C 0.51 11.79 7.66 34.62 0.27 12.05 16 8 O -0.50 -12.40 16.12 -19.25 -0.31 -12.71 16 9 C -0.11 -2.74 5.87 -105.05 -0.62 -3.36 16 10 C -0.19 -4.21 9.62 -38.91 -0.37 -4.58 16 11 C -0.10 -2.22 10.01 -39.73 -0.40 -2.62 16 12 C -0.20 -4.63 9.78 -38.81 -0.38 -5.01 16 13 C 0.10 2.48 5.56 -106.87 -0.59 1.89 16 14 C -0.46 -11.85 9.06 -37.72 -0.34 -12.19 16 15 H 0.08 2.04 7.89 -52.49 -0.41 1.62 16 16 C 0.07 1.79 5.18 -17.34 -0.09 1.70 16 17 N -0.79 -20.62 10.92 55.55 0.61 -20.01 16 18 Si 0.91 18.56 29.59 -169.99 -5.03 13.53 16 19 H -0.26 -5.17 7.11 56.52 0.40 -4.77 16 20 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 21 H -0.27 -5.46 7.11 56.52 0.40 -5.05 16 22 C -0.08 -2.22 8.22 -38.42 -0.32 -2.54 16 23 C -0.04 -0.62 6.33 -39.36 -0.25 -0.87 16 24 Cl -0.05 -0.84 28.35 -51.86 -1.47 -2.31 16 25 C -0.10 -1.30 9.48 -39.57 -0.38 -1.67 16 26 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 27 H 0.07 0.43 8.08 -51.93 -0.42 0.01 16 28 H 0.07 0.41 8.08 -51.93 -0.42 -0.01 16 29 H 0.13 1.12 8.06 -52.48 -0.42 0.70 16 30 H 0.14 1.86 8.06 -52.49 -0.42 1.43 16 31 H 0.10 2.07 7.59 -52.49 -0.40 1.68 16 32 H 0.10 1.77 8.06 -52.49 -0.42 1.35 16 33 H 0.10 2.14 8.06 -52.49 -0.42 1.72 16 34 H 0.28 6.80 8.30 -40.82 -0.34 6.46 16 35 H 0.14 3.86 5.77 -52.49 -0.30 3.56 16 36 H 0.14 1.40 8.06 -52.49 -0.42 0.98 16 LS Contribution 336.45 15.07 5.07 5.07 Total: -1.00 -29.20 336.45 -9.67 -38.87 By element: Atomic # 1 Polarization: 8.30 SS G_CDS: -3.63 Total: 4.67 kcal Atomic # 6 Polarization: -16.38 SS G_CDS: -4.69 Total: -21.07 kcal Atomic # 7 Polarization: -20.62 SS G_CDS: 0.61 Total: -20.01 kcal Atomic # 8 Polarization: -18.22 SS G_CDS: -0.53 Total: -18.75 kcal Atomic # 14 Polarization: 18.56 SS G_CDS: -5.03 Total: 13.53 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.47 Total: -2.31 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -29.20 -9.67 -38.87 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000740796432.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.271 kcal (2) G-P(sol) polarization free energy of solvation -29.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.471 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.870 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.141 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds