Wall clock time and date at job start Tue Mar 31 2020 11:26:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46966 * 2 1 4 4 C 1.34768 * 117.00021 * 180.02562 * 3 2 1 5 5 O 1.21522 * 119.99752 * 0.02562 * 4 3 2 6 6 C 1.47305 * 120.00089 * 180.02562 * 4 3 2 7 7 C 1.39874 * 120.11873 * 359.97438 * 6 4 3 8 8 C 1.37576 * 119.93270 * 180.02562 * 7 6 4 9 9 C 1.39120 * 120.16815 * 0.02562 * 8 7 6 10 10 O 1.35699 * 119.88510 * 180.02562 * 9 8 7 11 11 C 1.42898 * 116.99877 * 0.19102 * 10 9 8 12 12 H 1.08997 * 109.47216 * 23.96737 * 11 10 9 13 13 C 1.50704 * 109.47047 * 143.96662 * 11 10 9 14 14 H 1.07995 * 119.99852 * 25.52811 * 13 11 10 15 15 C 1.37874 * 119.99983 * 205.53439 * 13 11 10 16 16 N 1.31517 * 120.00053 * 185.07559 * 15 13 11 17 17 Si 1.86807 * 120.00084 * 5.06466 * 15 13 11 18 18 H 1.48496 * 109.46750 * 94.54005 * 17 15 13 19 19 H 1.48502 * 109.47049 * 214.53738 * 17 15 13 20 20 H 1.48498 * 109.46971 * 334.53738 * 17 15 13 21 21 C 1.53004 * 109.47313 * 263.96358 * 11 10 9 22 22 Cl 1.80298 * 109.46833 * 63.48454 * 21 11 10 23 23 C 1.38853 * 120.23219 * 359.72080 * 9 8 7 24 24 C 1.38042 * 120.06297 * 0.55693 * 23 9 8 25 25 F 1.35107 * 120.08004 * 179.72323 * 24 23 9 26 26 H 1.09004 * 109.47039 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46866 * 299.99128 * 1 2 3 28 28 H 1.08997 * 109.47417 * 59.99564 * 1 2 3 29 29 H 1.09009 * 109.47147 * 240.00564 * 2 1 3 30 30 H 1.08997 * 109.47417 * 120.00436 * 2 1 3 31 31 H 1.08003 * 120.03005 * 0.04306 * 7 6 4 32 32 H 1.07998 * 119.91677 * 179.97438 * 8 7 6 33 33 H 0.97001 * 119.99975 * 180.02562 * 16 15 13 34 34 H 1.08996 * 109.46941 * 183.48234 * 21 11 10 35 35 H 1.08992 * 109.47156 * 303.48244 * 21 11 10 36 36 H 1.07993 * 119.96582 * 180.30328 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3500 1.5456 -0.0005 5 8 4.0903 0.5818 -0.0015 6 6 3.9130 2.9068 0.0000 7 6 3.0632 4.0178 0.0005 8 6 3.5932 5.2874 0.0005 9 6 4.9724 5.4693 -0.0006 10 8 5.4890 6.7241 -0.0001 11 6 4.5585 7.8086 0.0058 12 1 3.6109 7.4721 0.4263 13 6 5.1068 8.9363 0.8418 14 1 6.1733 9.0393 0.9767 15 6 4.2468 9.8365 1.4343 16 7 4.7265 10.8769 2.0801 17 14 2.4002 9.5784 1.3196 18 1 1.9255 8.8560 2.5270 19 1 1.7208 10.8960 1.2320 20 1 2.0865 8.7782 0.1086 21 6 4.3358 8.2974 -1.4269 22 17 3.5848 6.9796 -2.4015 23 6 5.8224 4.3713 0.0042 24 6 5.3010 3.0931 -0.0016 25 9 6.1278 2.0245 -0.0026 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 1.8934 -0.5138 -0.8901 30 1 1.8934 -0.5139 0.8899 31 1 1.9922 3.8790 0.0012 32 1 2.9368 6.1450 0.0005 33 1 4.1214 11.5099 2.4973 34 1 3.6744 9.1637 -1.4165 35 1 5.2925 8.5760 -1.8685 36 1 6.8924 4.5175 0.0083 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001233593170.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:26:25 Heat of formation + Delta-G solvation = -155.423013 kcal Electronic energy + Delta-G solvation = -23973.018757 eV Core-core repulsion = 19977.225957 eV Total energy + Delta-G solvation = -3995.792800 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 316.071 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.79596 -40.44685 -39.69851 -37.17883 -36.41056 -35.33622 -33.48292 -32.06148 -31.24772 -30.28920 -29.75546 -25.51010 -24.56798 -23.15357 -22.98781 -21.53603 -20.38011 -18.48582 -17.91128 -17.32030 -16.80347 -16.63146 -16.16006 -15.84596 -15.54451 -15.17651 -14.65124 -14.29161 -14.13963 -13.91970 -13.51610 -13.41663 -13.09682 -13.00541 -12.91915 -12.57728 -12.28393 -12.11381 -11.93299 -11.75826 -11.50619 -11.20774 -11.08911 -10.93118 -10.63994 -10.42662 -10.21364 -10.01387 -9.78628 -9.55050 -9.03812 -8.80186 -7.98227 -6.59478 -4.67981 0.81647 1.31819 2.58863 2.63066 2.78975 2.95942 3.00536 3.07089 3.52591 3.76794 3.93715 4.37141 4.64973 4.72068 4.73318 4.81110 4.85712 5.05442 5.08685 5.30496 5.39619 5.47825 5.54373 5.55643 5.72781 5.73810 5.85667 5.99205 6.05347 6.21929 6.31994 6.41090 6.48581 6.76133 6.95950 7.61480 7.79126 8.08358 8.53371 8.94655 10.50863 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.016144 B = 0.003993 C = 0.003720 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1733.974323 B = 7010.816903 C = 7524.654602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.063 3.937 3 O -0.355 6.355 4 C 0.517 3.483 5 O -0.509 6.509 6 C -0.228 4.228 7 C 0.006 3.994 8 C -0.227 4.227 9 C 0.227 3.773 10 O -0.284 6.284 11 C 0.175 3.825 12 H 0.055 0.945 13 C -0.530 4.530 14 H 0.094 0.906 15 C 0.088 3.912 16 N -0.866 5.866 17 Si 0.857 3.143 18 H -0.265 1.265 19 H -0.274 1.274 20 H -0.255 1.255 21 C -0.042 4.042 22 Cl -0.227 7.227 23 C -0.219 4.219 24 C 0.204 3.796 25 F -0.116 7.116 26 H 0.078 0.922 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.143 0.857 32 H 0.147 0.853 33 H 0.275 0.725 34 H 0.100 0.900 35 H 0.098 0.902 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.398 -13.199 -4.564 15.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.010 4.010 3 O -0.273 6.273 4 C 0.364 3.636 5 O -0.398 6.398 6 C -0.231 4.231 7 C -0.013 4.013 8 C -0.246 4.246 9 C 0.177 3.823 10 O -0.195 6.195 11 C 0.119 3.881 12 H 0.073 0.927 13 C -0.567 4.567 14 H 0.112 0.888 15 C -0.119 4.119 16 N -0.500 5.500 17 Si 0.682 3.318 18 H -0.190 1.190 19 H -0.199 1.199 20 H -0.179 1.179 21 C -0.104 4.104 22 Cl -0.201 7.201 23 C -0.238 4.238 24 C 0.184 3.816 25 F -0.094 7.094 26 H 0.097 0.903 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.161 0.839 32 H 0.164 0.836 33 H 0.086 0.914 34 H 0.118 0.882 35 H 0.116 0.884 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -7.060 -13.357 -4.520 15.770 hybrid contribution -1.009 -0.202 -0.066 1.031 sum -8.069 -13.559 -4.585 16.431 Atomic orbital electron populations 1.21807 0.92633 1.02865 1.03635 1.22995 0.95234 0.80235 1.02584 1.86543 1.23923 1.32143 1.84673 1.20785 0.80509 0.89467 0.72870 1.90867 1.60164 1.42333 1.46474 1.18784 0.91868 0.91250 1.21152 1.20985 0.99782 0.90086 0.90416 1.21510 0.94839 0.98683 1.09548 1.19115 0.91166 0.86196 0.85826 1.86248 1.38117 1.11148 1.83984 1.21040 0.90615 0.84597 0.91803 0.92728 1.20679 0.97017 1.08226 1.30805 0.88844 1.24904 0.98987 0.94401 0.93641 1.69828 1.36144 1.11585 1.32413 0.87139 0.85244 0.79265 0.80201 1.18992 1.19906 1.17861 1.26073 1.00423 0.90783 0.93166 1.98680 1.86039 1.58319 1.77023 1.20141 1.01485 0.88434 1.13790 1.17137 0.85745 0.83208 0.95539 1.91574 1.71181 1.54008 1.92682 0.90313 0.91393 0.91425 0.91287 0.91255 0.83877 0.83567 0.91411 0.88198 0.88354 0.83183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.11 10.29 37.16 0.38 -0.72 16 2 C 0.06 0.65 6.20 37.16 0.23 0.88 16 3 O -0.36 -4.73 9.46 -40.68 -0.38 -5.11 16 4 C 0.52 8.16 7.88 34.42 0.27 8.43 16 5 O -0.51 -9.11 15.12 -19.28 -0.29 -9.41 16 6 C -0.23 -3.61 5.88 -104.92 -0.62 -4.23 16 7 C 0.01 0.08 9.60 -39.21 -0.38 -0.29 16 8 C -0.23 -3.73 7.14 -39.50 -0.28 -4.01 16 9 C 0.23 4.03 6.04 -39.03 -0.24 3.80 16 10 O -0.28 -5.72 9.68 -18.80 -0.18 -5.90 16 11 C 0.17 3.60 1.70 -27.88 -0.05 3.55 16 12 H 0.06 1.11 2.90 -51.93 -0.15 0.96 16 13 C -0.53 -13.04 9.23 -34.44 -0.32 -13.36 16 14 H 0.09 2.56 8.06 -52.49 -0.42 2.14 16 15 C 0.09 2.19 5.47 -17.82 -0.10 2.09 16 16 N -0.87 -23.17 13.96 55.43 0.77 -22.40 16 17 Si 0.86 17.83 26.37 -169.99 -4.48 13.34 16 18 H -0.26 -5.51 7.11 56.52 0.40 -5.11 16 19 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 20 H -0.25 -4.85 5.97 56.52 0.34 -4.51 16 21 C -0.04 -0.76 5.95 37.16 0.22 -0.54 16 22 Cl -0.23 -3.84 25.75 -51.86 -1.34 -5.17 16 23 C -0.22 -3.59 9.95 -39.43 -0.39 -3.98 16 24 C 0.20 3.36 7.28 -38.98 -0.28 3.07 16 25 F -0.12 -2.00 15.54 2.25 0.03 -1.96 16 26 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 27 H 0.07 0.49 8.14 -51.93 -0.42 0.07 16 28 H 0.07 0.49 8.14 -51.93 -0.42 0.06 16 29 H 0.07 0.69 8.14 -51.92 -0.42 0.27 16 30 H 0.07 0.70 8.14 -51.93 -0.42 0.27 16 31 H 0.14 1.76 7.60 -52.48 -0.40 1.36 16 32 H 0.15 2.44 5.06 -52.49 -0.27 2.17 16 33 H 0.28 6.83 8.31 -40.82 -0.34 6.49 16 34 H 0.10 1.79 6.91 -51.93 -0.36 1.43 16 35 H 0.10 1.74 8.14 -51.93 -0.42 1.32 16 36 H 0.15 2.24 8.06 -52.49 -0.42 1.81 16 LS Contribution 324.44 15.07 4.89 4.89 Total: -1.00 -27.32 324.44 -6.28 -33.60 By element: Atomic # 1 Polarization: 7.19 SS G_CDS: -3.75 Total: 3.43 kcal Atomic # 6 Polarization: -3.77 SS G_CDS: -1.55 Total: -5.32 kcal Atomic # 7 Polarization: -23.17 SS G_CDS: 0.77 Total: -22.40 kcal Atomic # 8 Polarization: -19.56 SS G_CDS: -0.86 Total: -20.42 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.03 Total: -1.96 kcal Atomic # 14 Polarization: 17.83 SS G_CDS: -4.48 Total: 13.34 kcal Atomic # 17 Polarization: -3.84 SS G_CDS: -1.34 Total: -5.17 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -27.32 -6.28 -33.60 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001233593170.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.824 kcal (2) G-P(sol) polarization free energy of solvation -27.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds