Wall clock time and date at job start Tue Mar 31 2020 11:06:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46506 * 119.99899 * 2 1 4 4 C 1.50700 * 109.47067 * 270.00050 * 3 2 1 5 5 H 1.07999 * 119.99825 * 359.97438 * 4 3 2 6 6 C 1.37875 * 119.99901 * 180.02562 * 4 3 2 7 7 N 1.31512 * 120.00041 * 180.02562 * 6 4 3 8 8 Si 1.86802 * 120.00073 * 359.97438 * 6 4 3 9 9 H 1.48497 * 109.46943 * 90.00818 * 8 6 4 10 10 H 1.48499 * 109.47011 * 210.00574 * 8 6 4 11 11 H 1.48502 * 109.47296 * 330.00356 * 8 6 4 12 12 C 1.34779 * 120.00293 * 179.97438 * 2 1 3 13 13 O 1.21358 * 120.00072 * 174.60623 * 12 2 1 14 14 C 1.49324 * 119.99701 * 354.60692 * 12 2 1 15 15 O 1.21401 * 119.99959 * 354.37689 * 14 12 2 16 16 N 1.34773 * 119.99986 * 174.38129 * 14 12 2 17 17 C 1.40011 * 119.99947 * 177.04617 * 16 14 12 18 18 C 1.39047 * 120.06737 * 325.92282 * 17 16 14 19 19 F 1.35102 * 120.03247 * 359.97438 * 18 17 16 20 20 C 1.38318 * 119.92920 * 179.70190 * 18 17 16 21 21 C 1.38479 * 120.06759 * 0.57188 * 20 18 17 22 22 F 1.35100 * 119.93136 * 179.74025 * 21 20 18 23 23 C 1.38477 * 120.13892 * 359.72460 * 21 20 18 24 24 C 1.38316 * 120.06595 * 359.97438 * 23 21 20 25 25 F 1.35098 * 120.03432 * 180.02562 * 24 23 21 26 26 H 1.08997 * 109.46935 * 265.04436 * 1 2 3 27 27 H 1.09001 * 109.46939 * 25.04066 * 1 2 3 28 28 H 1.09005 * 109.47233 * 145.04045 * 1 2 3 29 29 H 1.08996 * 109.47207 * 30.00006 * 3 2 1 30 30 H 1.08998 * 109.47048 * 150.00183 * 3 2 1 31 31 H 0.97005 * 120.00434 * 179.97438 * 7 6 4 32 32 H 0.97001 * 120.00376 * 356.76557 * 16 14 12 33 33 H 1.07998 * 119.96655 * 180.29537 * 20 18 17 34 34 H 1.07993 * 119.97204 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4486 1.7038 -1.4208 5 1 2.0981 1.0958 -2.2417 6 6 3.1268 2.8775 -1.6727 7 7 3.3456 3.2574 -2.9126 8 14 3.7338 3.9288 -0.2529 9 1 5.1069 3.5070 0.1236 10 1 3.7496 5.3554 -0.6648 11 1 2.8273 3.7597 0.9111 12 6 2.1389 -1.1672 0.0005 13 8 3.3485 -1.1695 -0.0983 14 6 1.3973 -2.4574 0.1226 15 8 0.2000 -2.4527 0.3238 16 7 2.0570 -3.6272 0.0097 17 6 1.3733 -4.8363 0.1856 18 6 0.3300 -4.9199 1.1010 19 9 -0.0251 -3.8343 1.8225 20 6 -0.3475 -6.1142 1.2680 21 6 0.0200 -7.2290 0.5333 22 9 -0.6402 -8.3955 0.7024 23 6 1.0626 -7.1506 -0.3747 24 6 1.7399 -5.9575 -0.5507 25 9 2.7567 -5.8816 -1.4371 26 1 -0.3633 -0.0888 1.0238 27 1 -0.3633 0.9311 -0.4350 28 1 -0.3634 -0.8423 -0.5889 29 1 1.6084 2.0284 0.5138 30 1 3.1499 1.1385 0.5138 31 1 3.8224 4.0834 -3.0900 32 1 3.0046 -3.6316 -0.1975 33 1 -1.1610 -6.1785 1.9753 34 1 1.3472 -8.0217 -0.9459 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000283249060.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:06:04 Heat of formation + Delta-G solvation = -146.211752 kcal Electronic energy + Delta-G solvation = -26112.488884 eV Core-core repulsion = 21597.591585 eV Total energy + Delta-G solvation = -4514.897299 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 316.082 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -49.47857 -49.45556 -49.18088 -40.81555 -39.13524 -37.96933 -35.82478 -34.59035 -32.56739 -31.02802 -29.84526 -28.75300 -26.40176 -24.89528 -23.86195 -23.11041 -21.61827 -19.97804 -18.96048 -18.29305 -17.99222 -17.32957 -17.06144 -16.59933 -16.32915 -16.29819 -16.05837 -15.80323 -15.62220 -15.52786 -15.23179 -14.93217 -14.66965 -14.36037 -13.72020 -13.45380 -12.94138 -12.80676 -12.53647 -12.45618 -12.42376 -12.15438 -12.06203 -11.69948 -11.12701 -10.98563 -10.68708 -10.59532 -10.22513 -9.62883 -9.36224 -9.09117 -8.66870 -8.59863 -7.94941 -6.16101 -4.16798 0.25116 0.37551 1.65678 2.28766 2.71071 3.09349 3.24363 3.30187 3.31774 3.48577 3.65433 3.75911 3.84983 4.11439 4.30364 4.32416 4.57202 4.90773 5.13697 5.16052 5.22515 5.31672 5.42400 5.75213 5.82653 5.99875 6.21113 6.37378 6.46108 6.71913 6.80189 7.03110 7.46794 7.58401 7.92388 8.29697 8.50265 8.86418 9.41900 10.96921 Molecular weight = 316.08amu Principal moments of inertia in cm(-1) A = 0.028834 B = 0.003198 C = 0.003012 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 970.833405 B = 8753.708929 C = 9292.457195 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.556 5.556 3 C 0.214 3.786 4 C -0.534 4.534 5 H 0.077 0.923 6 C 0.075 3.925 7 N -0.893 5.893 8 Si 0.876 3.124 9 H -0.272 1.272 10 H -0.283 1.283 11 H -0.265 1.265 12 C 0.502 3.498 13 O -0.517 6.517 14 C 0.502 3.498 15 O -0.482 6.482 16 N -0.645 5.645 17 C 0.075 3.925 18 C 0.158 3.842 19 F -0.095 7.095 20 C -0.182 4.182 21 C 0.143 3.857 22 F -0.123 7.123 23 C -0.181 4.181 24 C 0.137 3.863 25 F -0.115 7.115 26 H 0.054 0.946 27 H 0.074 0.926 28 H 0.080 0.920 29 H 0.040 0.960 30 H 0.040 0.960 31 H 0.266 0.734 32 H 0.430 0.570 33 H 0.160 0.840 34 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.035 -20.795 8.629 23.588 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.287 5.287 3 C 0.094 3.906 4 C -0.573 4.573 5 H 0.095 0.905 6 C -0.128 4.128 7 N -0.531 5.531 8 Si 0.703 3.297 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.190 1.190 12 C 0.282 3.718 13 O -0.394 6.394 14 C 0.286 3.714 15 O -0.354 6.354 16 N -0.294 5.294 17 C -0.023 4.023 18 C 0.135 3.865 19 F -0.073 7.073 20 C -0.202 4.202 21 C 0.123 3.877 22 F -0.101 7.101 23 C -0.201 4.201 24 C 0.115 3.885 25 F -0.093 7.093 26 H 0.073 0.927 27 H 0.093 0.907 28 H 0.098 0.902 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.076 0.924 32 H 0.270 0.730 33 H 0.178 0.822 34 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -7.159 -20.471 8.614 23.334 hybrid contribution 0.772 0.611 0.382 1.056 sum -6.387 -19.859 8.996 22.718 Atomic orbital electron populations 1.22042 0.78865 1.03571 1.01776 1.47770 1.07733 1.06003 1.67237 1.19901 0.92516 0.79141 0.99039 1.21245 1.37605 1.07554 0.90846 0.90531 1.24841 0.95076 0.97221 0.95683 1.69886 1.41022 1.23525 1.18680 0.86852 0.80146 0.79912 0.82808 1.19778 1.20893 1.18965 1.19309 0.87453 0.84094 0.80951 1.90766 1.13230 1.86397 1.49015 1.21001 0.87708 0.85456 0.77278 1.90795 1.14141 1.87037 1.43410 1.43161 1.14360 1.02332 1.69512 1.17705 0.98582 0.87186 0.98791 1.16709 0.94759 0.83953 0.91057 1.91687 1.90408 1.50942 1.74291 1.20985 1.04023 0.90682 1.04500 1.16726 0.92445 0.81801 0.96734 1.91566 1.79140 1.45183 1.94244 1.20892 0.98038 0.98573 1.02643 1.16619 0.89127 0.92749 0.90053 1.91591 1.56002 1.96697 1.65032 0.92714 0.90713 0.90171 0.94231 0.94194 0.92377 0.73025 0.82228 0.82165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.38 9.24 59.85 0.55 1.94 16 2 N -0.56 -11.64 2.86 -183.51 -0.52 -12.17 16 3 C 0.21 5.10 4.17 -5.19 -0.02 5.08 16 4 C -0.53 -15.04 9.94 -34.44 -0.34 -15.39 16 5 H 0.08 2.38 8.06 -52.49 -0.42 1.95 16 6 C 0.07 2.14 5.47 -17.82 -0.10 2.04 16 7 N -0.89 -27.05 13.96 55.43 0.77 -26.28 16 8 Si 0.88 20.91 27.47 -169.99 -4.67 16.25 16 9 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 10 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 11 H -0.26 -5.92 6.54 56.52 0.37 -5.55 16 12 C 0.50 10.16 7.72 -11.64 -0.09 10.07 16 13 O -0.52 -11.74 16.13 5.49 0.09 -11.65 16 14 C 0.50 8.39 7.16 -11.65 -0.08 8.31 16 15 O -0.48 -8.13 9.77 5.45 0.05 -8.08 16 16 N -0.65 -8.94 5.23 -10.17 -0.05 -9.00 16 17 C 0.08 0.89 6.29 -83.52 -0.53 0.37 16 18 C 0.16 1.81 6.69 -39.25 -0.26 1.55 16 19 F -0.10 -1.32 13.40 2.25 0.03 -1.29 16 20 C -0.18 -1.57 10.00 -39.46 -0.39 -1.97 16 21 C 0.14 1.16 7.30 -39.40 -0.29 0.87 16 22 F -0.12 -0.99 17.26 2.25 0.04 -0.95 16 23 C -0.18 -1.41 10.00 -39.46 -0.39 -1.81 16 24 C 0.14 1.35 7.31 -39.25 -0.29 1.07 16 25 F -0.11 -1.22 16.94 2.25 0.04 -1.18 16 26 H 0.05 0.84 8.11 -51.93 -0.42 0.42 16 27 H 0.07 1.26 8.03 -51.93 -0.42 0.84 16 28 H 0.08 1.35 5.92 -51.93 -0.31 1.04 16 29 H 0.04 0.89 7.13 -51.93 -0.37 0.52 16 30 H 0.04 0.99 6.93 -51.93 -0.36 0.63 16 31 H 0.27 7.51 8.31 -40.82 -0.34 7.17 16 32 H 0.43 5.56 8.13 -40.82 -0.33 5.23 16 33 H 0.16 1.06 8.06 -52.49 -0.42 0.64 16 34 H 0.16 0.88 8.06 -52.49 -0.42 0.45 16 LS Contribution 311.77 15.07 4.70 4.70 Total: -1.00 -32.15 311.77 -4.40 -36.55 By element: Atomic # 1 Polarization: 3.62 SS G_CDS: -2.64 Total: 0.98 kcal Atomic # 6 Polarization: 14.35 SS G_CDS: -2.23 Total: 12.12 kcal Atomic # 7 Polarization: -47.64 SS G_CDS: 0.20 Total: -47.45 kcal Atomic # 8 Polarization: -19.87 SS G_CDS: 0.14 Total: -19.73 kcal Atomic # 9 Polarization: -3.52 SS G_CDS: 0.11 Total: -3.42 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -4.67 Total: 16.25 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -32.15 -4.40 -36.55 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000283249060.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.665 kcal (2) G-P(sol) polarization free energy of solvation -32.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds