Wall clock time and date at job start Tue Mar 31 2020 11:38:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35314 * 126.12529 * 2 1 4 4 C 1.39874 * 107.92161 * 179.90353 * 3 2 1 5 5 C 1.50700 * 125.90295 * 180.14016 * 4 3 2 6 6 F 1.39902 * 109.47348 * 185.23472 * 5 4 3 7 7 F 1.39893 * 109.46995 * 305.23935 * 5 4 3 8 8 F 1.39906 * 109.46736 * 65.23794 * 5 4 3 9 9 N 1.30843 * 108.20117 * 0.36552 * 4 3 2 10 10 N 1.34952 * 126.12806 * 180.31191 * 2 1 3 11 11 C 1.46495 * 126.03633 * 359.94003 * 10 2 1 12 12 C 1.50698 * 109.47177 * 89.99998 * 11 10 2 13 13 O 1.21296 * 119.99701 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00197 * 179.97438 * 12 11 10 15 15 C 1.37097 * 119.99974 * 180.02562 * 14 12 11 16 16 H 1.07998 * 120.00633 * 20.22237 * 15 14 12 17 17 C 1.38951 * 119.99945 * 200.22292 * 15 14 12 18 18 N 1.31411 * 120.00216 * 21.42337 * 17 15 14 19 19 Si 1.86798 * 119.99993 * 201.42854 * 17 15 14 20 20 H 1.48501 * 109.47555 * 89.99820 * 19 17 15 21 21 H 1.48501 * 109.47244 * 210.00026 * 19 17 15 22 22 H 1.48502 * 109.47110 * 329.99778 * 19 17 15 23 23 C 1.46505 * 119.99919 * 0.02562 * 14 12 11 24 24 C 1.47202 * 109.46957 * 83.94844 * 23 14 12 25 25 N 5.58005 * 58.15145 * 176.91548 * 2 1 3 26 26 H 1.09001 * 109.46921 * 269.69179 * 1 2 3 27 27 H 1.08996 * 109.46674 * 149.68612 * 1 2 3 28 28 H 1.09001 * 109.46449 * 29.68918 * 1 2 3 29 29 H 1.08003 * 126.04499 * 0.03206 * 3 2 1 30 30 H 1.08995 * 109.47104 * 210.00097 * 11 10 2 31 31 H 1.09008 * 109.47334 * 330.00464 * 11 10 2 32 32 H 0.96997 * 120.00375 * 180.02562 * 18 17 15 33 33 H 1.08998 * 109.46854 * 203.94377 * 23 14 12 34 34 H 1.08998 * 109.46929 * 323.94580 * 23 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3048 1.0930 0.0000 4 6 3.6335 0.6560 0.0022 5 6 4.8543 1.5395 0.0060 6 9 6.0025 0.7491 -0.1129 7 9 4.7882 2.4308 -1.0702 8 9 4.9056 2.2589 1.2049 9 7 3.6335 -0.6524 -0.0044 10 7 2.3027 -1.0900 -0.0059 11 6 1.8540 -2.4845 -0.0123 12 6 1.6989 -2.9559 -1.4352 13 8 1.9400 -2.2012 -2.3537 14 7 1.2934 -4.2162 -1.6873 15 6 1.1528 -4.6451 -2.9818 16 1 1.6582 -4.1238 -3.7814 17 6 0.3601 -5.7505 -3.2653 18 7 -0.5683 -6.1286 -2.4155 19 14 0.6141 -6.6992 -4.8542 20 1 1.6079 -7.7801 -4.6320 21 1 -0.6758 -7.2942 -5.2871 22 1 1.1121 -5.7777 -5.9068 23 6 1.0027 -5.1278 -0.5779 24 6 -0.3745 -4.9054 -0.1080 25 7 -1.4374 -4.7331 0.2551 26 1 -0.3633 -0.0055 1.0277 27 1 -0.3632 -0.8871 -0.5187 28 1 -0.3632 0.8928 -0.5090 29 1 1.9741 2.1211 0.0005 30 1 2.5903 -3.1054 0.4979 31 1 0.8958 -2.5603 0.5020 32 1 -1.1214 -6.9004 -2.6132 33 1 1.1090 -6.1582 -0.9170 34 1 1.7000 -4.9403 0.2386 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291546317.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:38:23 Heat of formation + Delta-G solvation = -62.379548 kcal Electronic energy + Delta-G solvation = -26262.666503 eV Core-core repulsion = 21783.697192 eV Total energy + Delta-G solvation = -4478.969311 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 316.089 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -50.08881 -47.62558 -47.57509 -41.43817 -39.00410 -36.04684 -34.61675 -33.67260 -32.25445 -31.88519 -28.75700 -27.65828 -27.12444 -25.93644 -24.38592 -21.10005 -20.72374 -19.35144 -18.48825 -18.23785 -18.10396 -17.36927 -17.04558 -16.64203 -16.04368 -15.19079 -14.64028 -14.59945 -14.41422 -14.37110 -14.15325 -14.02122 -13.74837 -13.73302 -13.60470 -13.28271 -13.25663 -13.00341 -12.69773 -12.54616 -12.34172 -11.98023 -11.91335 -11.79514 -11.49668 -11.28388 -10.82943 -10.77205 -10.54848 -10.51100 -9.72198 -9.46260 -8.91126 -8.48955 -8.26089 -6.70085 -4.21726 1.65199 2.04803 2.40917 2.85050 2.95531 3.12984 3.16601 3.28836 3.50150 3.71217 3.74645 3.94904 4.03113 4.43484 4.47119 4.64531 4.67106 4.78824 4.92321 5.17355 5.19433 5.27149 5.45984 5.50001 5.55984 5.80613 5.85224 6.04595 6.24190 6.28319 6.88142 7.29533 7.46605 7.64001 8.05079 8.49405 8.76309 8.94354 9.43329 10.35747 Molecular weight = 316.09amu Principal moments of inertia in cm(-1) A = 0.020004 B = 0.003666 C = 0.003353 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1399.407447 B = 7635.391988 C = 8348.680849 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.110 3.890 3 C -0.240 4.240 4 C -0.025 4.025 5 C 0.559 3.441 6 F -0.168 7.168 7 F -0.168 7.168 8 F -0.171 7.171 9 N -0.227 5.227 10 N -0.320 5.320 11 C 0.108 3.892 12 C 0.435 3.565 13 O -0.552 6.552 14 N -0.432 5.432 15 C -0.316 4.316 16 H 0.110 0.890 17 C 0.037 3.963 18 N -0.872 5.872 19 Si 0.930 3.070 20 H -0.274 1.274 21 H -0.284 1.284 22 H -0.268 1.268 23 C 0.215 3.785 24 C 0.239 3.761 25 N -0.462 5.462 26 H 0.083 0.917 27 H 0.078 0.922 28 H 0.090 0.910 29 H 0.156 0.844 30 H 0.120 0.880 31 H 0.114 0.886 32 H 0.276 0.724 33 H 0.130 0.870 34 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.372 7.829 8.022 12.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.018 4.018 3 C -0.269 4.269 4 C -0.191 4.191 5 C 0.502 3.498 6 F -0.150 7.150 7 F -0.150 7.150 8 F -0.153 7.153 9 N -0.051 5.051 10 N -0.103 5.103 11 C -0.017 4.017 12 C 0.221 3.779 13 O -0.433 6.433 14 N -0.153 5.153 15 C -0.443 4.443 16 H 0.127 0.873 17 C -0.168 4.168 18 N -0.510 5.510 19 Si 0.756 3.244 20 H -0.199 1.199 21 H -0.209 1.209 22 H -0.192 1.192 23 C 0.088 3.912 24 C -0.080 4.080 25 N -0.142 5.142 26 H 0.102 0.898 27 H 0.097 0.903 28 H 0.109 0.891 29 H 0.174 0.826 30 H 0.137 0.863 31 H 0.132 0.868 32 H 0.087 0.913 33 H 0.148 0.852 34 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 4.482 7.133 8.072 11.667 hybrid contribution -0.057 -0.039 -0.994 0.997 sum 4.425 7.094 7.078 10.954 Atomic orbital electron populations 1.20522 0.86554 1.04929 1.03408 1.21104 0.95185 0.86256 0.99233 1.20750 0.89591 0.99700 1.16871 1.21803 0.94123 0.93243 1.09958 1.16874 0.81222 0.77869 0.73804 1.93227 1.52164 1.73932 1.95630 1.93224 1.96381 1.69434 1.55915 1.93215 1.96584 1.79094 1.46397 1.77313 0.97784 1.09942 1.20098 1.48056 1.02728 1.05779 1.53704 1.21815 1.02239 0.78287 0.99316 1.20076 0.85712 0.82673 0.89428 1.90642 1.54002 1.53254 1.45363 1.43596 1.57861 1.07767 1.06100 1.19732 1.28836 1.12183 0.83514 0.87256 1.25328 0.93519 0.98279 0.99708 1.69817 1.16928 1.26405 1.37840 0.85849 0.77826 0.79575 0.81139 1.19916 1.20941 1.19200 1.18794 0.84179 0.99151 0.89086 1.29253 0.95378 0.92489 0.90832 1.80951 1.11375 1.09349 1.12538 0.89833 0.90343 0.89139 0.82592 0.86253 0.86801 0.91325 0.85222 0.89595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.18 9.90 36.01 0.36 -0.82 16 2 C 0.11 1.68 6.93 -82.26 -0.57 1.11 16 3 C -0.24 -3.51 10.64 -40.01 -0.43 -3.94 16 4 C -0.03 -0.41 6.51 -82.40 -0.54 -0.94 16 5 C 0.56 7.99 3.51 36.01 0.13 8.11 16 6 F -0.17 -2.54 17.14 2.25 0.04 -2.50 16 7 F -0.17 -2.36 17.30 2.25 0.04 -2.32 16 8 F -0.17 -2.22 17.30 2.25 0.04 -2.19 16 9 N -0.23 -4.13 12.35 33.67 0.42 -3.71 16 10 N -0.32 -5.50 3.10 -58.31 -0.18 -5.68 16 11 C 0.11 1.73 5.15 -5.20 -0.03 1.70 16 12 C 0.43 9.12 7.63 -10.99 -0.08 9.04 16 13 O -0.55 -14.02 16.10 5.54 0.09 -13.93 16 14 N -0.43 -9.18 2.60 -117.93 -0.31 -9.48 16 15 C -0.32 -7.61 9.27 -14.93 -0.14 -7.75 16 16 H 0.11 2.85 7.43 -52.49 -0.39 2.46 16 17 C 0.04 0.84 4.84 -17.47 -0.08 0.76 16 18 N -0.87 -20.45 9.58 55.50 0.53 -19.92 16 19 Si 0.93 18.65 29.60 -169.99 -5.03 13.62 16 20 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 21 H -0.28 -5.78 7.11 56.52 0.40 -5.38 16 22 H -0.27 -5.52 7.11 56.52 0.40 -5.12 16 23 C 0.22 3.72 4.91 -6.83 -0.03 3.68 16 24 C 0.24 4.61 12.82 -20.75 -0.27 4.35 16 25 N -0.46 -9.73 18.54 42.17 0.78 -8.95 16 26 H 0.08 0.82 8.14 -51.93 -0.42 0.39 16 27 H 0.08 1.13 7.72 -51.93 -0.40 0.73 16 28 H 0.09 0.94 8.14 -51.93 -0.42 0.52 16 29 H 0.16 1.80 8.06 -52.48 -0.42 1.38 16 30 H 0.12 1.55 7.42 -51.93 -0.39 1.17 16 31 H 0.11 1.58 7.01 -51.92 -0.36 1.21 16 32 H 0.28 6.32 8.31 -40.82 -0.34 5.98 16 33 H 0.13 2.31 6.63 -51.93 -0.34 1.97 16 34 H 0.09 1.04 6.69 -51.93 -0.35 0.70 16 LS Contribution 322.60 15.07 4.86 4.86 Total: -1.00 -30.77 322.60 -3.04 -33.81 By element: Atomic # 1 Polarization: 3.72 SS G_CDS: -2.63 Total: 1.09 kcal Atomic # 6 Polarization: 16.98 SS G_CDS: -1.68 Total: 15.30 kcal Atomic # 7 Polarization: -48.99 SS G_CDS: 1.24 Total: -47.75 kcal Atomic # 8 Polarization: -14.02 SS G_CDS: 0.09 Total: -13.93 kcal Atomic # 9 Polarization: -7.12 SS G_CDS: 0.12 Total: -7.00 kcal Atomic # 14 Polarization: 18.65 SS G_CDS: -5.03 Total: 13.62 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -30.77 -3.04 -33.81 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291546317.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.574 kcal (2) G-P(sol) polarization free energy of solvation -30.766 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.340 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.806 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds