Wall clock time and date at job start Tue Mar 31 2020 11:04:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46497 * 109.46837 * 184.11854 * 3 2 1 5 5 C 1.36826 * 119.99901 * 93.56685 * 4 3 2 6 6 H 1.08004 * 120.00303 * 169.74149 * 5 4 3 7 7 C 1.39044 * 119.99859 * 349.73719 * 5 4 3 8 8 N 1.31362 * 120.00106 * 333.10676 * 7 5 4 9 9 Si 1.86804 * 119.99815 * 153.10629 * 7 5 4 10 10 H 1.48509 * 109.46881 * 94.99669 * 9 7 5 11 11 H 1.48498 * 109.46981 * 214.99649 * 9 7 5 12 12 H 1.48491 * 109.47229 * 334.99980 * 9 7 5 13 13 C 1.34778 * 120.00430 * 273.55730 * 4 3 2 14 14 O 1.21718 * 120.00588 * 185.30965 * 13 4 3 15 15 C 1.46725 * 119.99743 * 5.32162 * 13 4 3 16 16 C 1.36173 * 125.47051 * 98.78451 * 15 13 4 17 17 Cl 1.73601 * 126.15302 * 0.02562 * 16 15 13 18 18 C 1.41668 * 107.69775 * 179.97438 * 16 15 13 19 19 C 1.40098 * 133.32887 * 180.02562 * 18 16 15 20 20 C 1.36452 * 119.83329 * 180.02562 * 19 18 16 21 21 C 1.38932 * 120.60932 * 0.02562 * 20 19 18 22 22 C 1.37696 * 120.64358 * 0.02562 * 21 20 19 23 23 C 1.39206 * 119.81368 * 359.66780 * 22 21 20 24 24 N 1.37561 * 133.11322 * 179.58065 * 23 22 21 25 25 C 1.46500 * 125.60447 * 0.80021 * 24 23 22 26 26 H 4.40634 * 5.51466 * 179.97438 * 4 1 2 27 27 H 1.09004 * 109.47060 * 64.12064 * 3 2 1 28 28 H 1.08999 * 109.47327 * 304.12086 * 3 2 1 29 29 H 0.97003 * 120.00684 * 180.02562 * 8 7 5 30 30 H 1.08004 * 120.08535 * 0.02562 * 19 18 16 31 31 H 1.07999 * 119.69629 * 179.97438 * 20 19 18 32 32 H 1.07999 * 119.67517 * 179.97438 * 21 20 19 33 33 H 1.07999 * 120.09006 * 180.02562 * 22 21 20 34 34 H 1.09004 * 109.47283 * 264.79927 * 25 24 23 35 35 H 1.09004 * 109.47097 * 24.80012 * 25 24 23 36 36 H 1.08997 * 109.46912 * 144.79905 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1336 1.3785 0.0992 5 6 3.4309 1.9125 1.3234 6 1 3.9433 2.8610 1.3888 7 6 3.0732 1.2341 2.4832 8 7 2.0462 0.4151 2.4748 9 14 4.0531 1.4875 4.0533 10 1 3.3970 2.5293 4.8836 11 1 4.1099 0.2125 4.8125 12 1 5.4314 1.9221 3.7119 13 6 3.2896 2.1201 -1.0153 14 8 3.7852 3.2296 -0.9438 15 6 2.8619 1.5902 -2.3149 16 6 1.6879 1.8825 -2.9399 17 17 0.4459 2.9390 -2.3440 18 6 1.6628 1.1704 -4.1643 19 6 0.7295 1.0807 -5.2053 20 6 0.9920 0.2904 -6.2862 21 6 2.1782 -0.4286 -6.3653 22 6 3.1107 -0.3578 -5.3546 23 6 2.8684 0.4466 -4.2447 24 7 3.5855 0.7113 -3.1009 25 6 4.9026 0.1600 -2.7733 26 1 -1.0502 -0.0004 -0.0002 27 1 3.0095 -0.4477 -0.9246 28 1 3.0096 -0.5756 0.8507 29 1 1.7964 -0.0580 3.2840 30 1 -0.1956 1.6356 -5.1524 31 1 0.2708 0.2225 -7.0872 32 1 2.3704 -1.0498 -7.2277 33 1 4.0299 -0.9201 -5.4256 34 1 4.7810 -0.7238 -2.1470 35 1 5.4205 -0.1144 -3.6923 36 1 5.4863 0.9080 -2.2368 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490985270.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:04:10 Heat of formation + Delta-G solvation = 100.353659 kcal Electronic energy + Delta-G solvation = -24051.692483 eV Core-core repulsion = 20530.052967 eV Total energy + Delta-G solvation = -3521.639516 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 316.072 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.34019 -38.58101 -36.68580 -35.91939 -35.26493 -32.65441 -32.21642 -31.30701 -30.21956 -28.96223 -26.64830 -26.09711 -25.17193 -22.97533 -21.46572 -20.75806 -19.05803 -18.01066 -17.14267 -16.75728 -16.61968 -16.01728 -15.28080 -14.96443 -14.37438 -14.29312 -14.04921 -13.86126 -13.62653 -13.33974 -13.00515 -12.79130 -12.33531 -12.29815 -12.24130 -11.79408 -11.67835 -11.63814 -11.08867 -10.90441 -10.83172 -10.65496 -10.41490 -10.25237 -9.44593 -9.35520 -9.29722 -8.94896 -8.75297 -8.09974 -7.95942 -7.32384 -6.55275 -3.96851 1.15943 1.75742 2.40618 2.70060 2.98639 3.14758 3.17176 3.25299 3.56867 3.87705 4.02924 4.04746 4.12321 4.66290 4.77430 4.86531 4.91435 5.11826 5.21357 5.27960 5.38624 5.47815 5.53503 5.63668 5.71494 5.78410 5.93536 6.10715 6.16086 6.53773 6.61225 6.69811 6.74027 6.88707 7.00817 7.22114 7.37522 7.39578 7.81959 8.22905 8.84359 8.91755 9.13865 9.67960 10.44724 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.018982 B = 0.004997 C = 0.004702 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1474.722314 B = 5601.644756 C = 5953.220862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C -0.121 4.121 3 C 0.230 3.770 4 N -0.409 5.409 5 C -0.320 4.320 6 H 0.113 0.887 7 C 0.038 3.962 8 N -0.842 5.842 9 Si 0.920 3.080 10 H -0.276 1.276 11 H -0.280 1.280 12 H -0.266 1.266 13 C 0.489 3.511 14 O -0.565 6.565 15 C 0.100 3.900 16 C -0.088 4.088 17 Cl -0.037 7.037 18 C -0.092 4.092 19 C -0.064 4.064 20 C -0.150 4.150 21 C -0.103 4.103 22 C -0.124 4.124 23 C 0.101 3.899 24 N -0.464 5.464 25 C 0.077 3.923 26 H 0.199 0.801 27 H 0.056 0.944 28 H 0.114 0.886 29 H 0.272 0.728 30 H 0.122 0.878 31 H 0.120 0.880 32 H 0.122 0.878 33 H 0.119 0.881 34 H 0.075 0.925 35 H 0.085 0.915 36 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.393 -6.220 -11.981 13.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.260 4.260 2 C -0.122 4.122 3 C 0.107 3.893 4 N -0.125 5.125 5 C -0.447 4.447 6 H 0.130 0.870 7 C -0.169 4.169 8 N -0.478 5.478 9 Si 0.745 3.255 10 H -0.202 1.202 11 H -0.206 1.206 12 H -0.190 1.190 13 C 0.276 3.724 14 O -0.449 6.449 15 C -0.011 4.011 16 C -0.122 4.122 17 Cl -0.008 7.008 18 C -0.097 4.097 19 C -0.083 4.083 20 C -0.169 4.169 21 C -0.122 4.122 22 C -0.145 4.145 23 C -0.006 4.006 24 N -0.148 5.148 25 C -0.064 4.064 26 H 0.216 0.784 27 H 0.074 0.926 28 H 0.132 0.868 29 H 0.083 0.917 30 H 0.140 0.860 31 H 0.138 0.862 32 H 0.140 0.860 33 H 0.137 0.863 34 H 0.094 0.906 35 H 0.104 0.896 36 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 0.805 -5.832 -11.579 12.990 hybrid contribution -0.159 0.051 0.986 1.000 sum 0.647 -5.781 -10.593 12.085 Atomic orbital electron populations 1.24191 0.95256 1.01077 1.05487 1.22817 0.94025 0.99253 0.96122 1.18393 0.85096 0.85063 1.00700 1.43786 1.53258 1.09806 1.05651 1.19739 1.36200 1.08285 0.80487 0.86984 1.25342 0.95161 0.96837 0.99582 1.70182 1.20312 1.27475 1.29787 0.86024 0.80668 0.77977 0.80788 1.20198 1.20570 1.19024 1.16739 0.87895 0.85847 0.81948 1.90706 1.48595 1.20119 1.85483 1.20517 0.91849 0.94245 0.94524 1.19669 0.92555 1.03776 0.96212 1.98315 1.51010 1.63769 1.87726 1.17861 0.95666 1.00913 0.95262 1.20329 0.97876 0.97988 0.92069 1.20525 0.98009 0.99662 0.98689 1.20749 0.93862 0.99770 0.97833 1.19968 1.00800 1.00956 0.92771 1.18218 0.92177 1.00699 0.89547 1.44181 1.16688 1.38299 1.15598 1.22050 0.81523 1.00301 1.02544 0.78420 0.92620 0.86809 0.91688 0.85997 0.86198 0.85956 0.86273 0.90626 0.89632 0.89296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.24 -5.15 19.25 29.55 0.57 -4.58 16 2 C -0.12 -2.76 11.52 -37.12 -0.43 -3.19 16 3 C 0.23 5.12 4.91 -6.83 -0.03 5.09 16 4 N -0.41 -10.14 2.59 -119.41 -0.31 -10.45 16 5 C -0.32 -8.47 9.40 -15.02 -0.14 -8.61 16 6 H 0.11 3.13 7.32 -52.48 -0.38 2.74 16 7 C 0.04 0.94 4.81 -17.45 -0.08 0.85 16 8 N -0.84 -21.09 9.50 55.50 0.53 -20.56 16 9 Si 0.92 19.34 29.63 -169.99 -5.04 14.31 16 10 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 11 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 12 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 13 C 0.49 12.10 6.56 -12.83 -0.08 12.01 16 14 O -0.57 -15.88 16.71 5.17 0.09 -15.79 16 15 C 0.10 2.14 4.82 -82.24 -0.40 1.75 16 16 C -0.09 -1.81 6.73 -39.02 -0.26 -2.07 16 17 Cl -0.04 -0.75 29.04 -51.86 -1.51 -2.26 16 18 C -0.09 -1.63 6.16 -106.90 -0.66 -2.29 16 19 C -0.06 -0.95 10.06 -39.53 -0.40 -1.34 16 20 C -0.15 -1.83 9.97 -39.97 -0.40 -2.23 16 21 C -0.10 -1.19 10.02 -39.52 -0.40 -1.58 16 22 C -0.12 -1.61 9.90 -39.42 -0.39 -2.00 16 23 C 0.10 1.66 6.81 -83.95 -0.57 1.09 16 24 N -0.46 -8.12 2.85 -117.66 -0.34 -8.46 16 25 C 0.08 1.03 10.42 59.85 0.62 1.66 16 26 H 0.20 3.52 7.80 -54.08 -0.42 3.10 16 27 H 0.06 1.10 5.68 -51.93 -0.29 0.81 16 28 H 0.11 2.59 6.23 -51.93 -0.32 2.27 16 29 H 0.27 6.47 8.31 -40.82 -0.34 6.13 16 30 H 0.12 1.64 8.06 -52.48 -0.42 1.22 16 31 H 0.12 1.13 8.06 -52.49 -0.42 0.70 16 32 H 0.12 1.04 8.06 -52.49 -0.42 0.61 16 33 H 0.12 1.22 7.92 -52.49 -0.42 0.81 16 34 H 0.08 0.92 7.45 -51.93 -0.39 0.53 16 35 H 0.09 0.85 7.89 -51.93 -0.41 0.44 16 36 H 0.09 1.29 7.91 -51.93 -0.41 0.88 16 LS Contribution 333.65 15.07 5.03 5.03 Total: -1.00 -31.34 333.65 -8.04 -39.39 By element: Atomic # 1 Polarization: 7.68 SS G_CDS: -3.45 Total: 4.23 kcal Atomic # 6 Polarization: -2.39 SS G_CDS: -3.05 Total: -5.44 kcal Atomic # 7 Polarization: -39.35 SS G_CDS: -0.12 Total: -39.47 kcal Atomic # 8 Polarization: -15.88 SS G_CDS: 0.09 Total: -15.79 kcal Atomic # 14 Polarization: 19.34 SS G_CDS: -5.04 Total: 14.31 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.51 Total: -2.26 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -31.34 -8.04 -39.39 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490985270.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.740 kcal (2) G-P(sol) polarization free energy of solvation -31.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.386 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds