Wall clock time and date at job start Tue Mar 31 2020 11:07:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42908 * 113.99933 * 2 1 4 4 C 1.52995 * 109.47200 * 180.02562 * 3 2 1 5 5 N 1.46507 * 109.46859 * 65.00066 * 4 3 2 6 6 C 1.46493 * 119.99944 * 84.40766 * 5 4 3 7 7 C 1.50705 * 109.47160 * 89.99543 * 6 5 4 8 8 H 1.07992 * 119.99885 * 0.02562 * 7 6 5 9 9 C 1.37874 * 120.00024 * 179.97438 * 7 6 5 10 10 N 1.31517 * 120.00186 * 0.02562 * 9 7 6 11 11 Si 1.86796 * 120.00063 * 180.02562 * 9 7 6 12 12 H 1.48501 * 109.47194 * 90.00302 * 11 9 7 13 13 H 1.48505 * 109.47392 * 210.00296 * 11 9 7 14 14 H 1.48502 * 109.47295 * 330.00182 * 11 9 7 15 15 C 1.34772 * 119.99991 * 264.40427 * 5 4 3 16 16 O 1.21536 * 120.00189 * 5.16560 * 15 5 4 17 17 C 1.48009 * 119.99957 * 185.16322 * 15 5 4 18 18 C 1.39849 * 120.93526 * 55.44418 * 17 15 5 19 19 C 1.38204 * 119.02253 * 179.77912 * 18 17 15 20 20 Cl 1.73601 * 119.52929 * 180.25015 * 19 18 17 21 21 N 1.31942 * 120.94357 * 0.51091 * 19 18 17 22 22 C 1.31750 * 122.07967 * 359.73870 * 21 19 18 23 23 C 1.38492 * 120.86206 * 0.02562 * 22 21 19 24 24 F 1.35103 * 120.51674 * 179.97438 * 23 22 21 25 25 H 1.09000 * 109.47007 * 299.99753 * 1 2 3 26 26 H 1.09007 * 109.47170 * 59.99581 * 1 2 3 27 27 H 1.08994 * 109.46947 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46716 * 60.00254 * 3 2 1 29 29 H 1.08996 * 109.47088 * 300.00032 * 3 2 1 30 30 H 1.09000 * 109.47248 * 305.00379 * 4 3 2 31 31 H 1.08995 * 109.47533 * 185.00382 * 4 3 2 32 32 H 1.08996 * 109.47672 * 210.00058 * 6 5 4 33 33 H 1.09001 * 109.47197 * 330.00327 * 6 5 4 34 34 H 0.96997 * 120.00377 * 179.97438 * 10 9 7 35 35 H 1.08005 * 120.48423 * 0.02562 * 18 17 15 36 36 H 1.07995 * 119.56866 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 7 3.9756 0.5645 -1.2528 6 6 4.1682 1.3872 -2.4496 7 6 5.5891 1.8877 -2.4918 8 1 6.2796 1.6195 -1.7060 9 6 6.0076 2.6872 -3.5342 10 7 5.1668 3.0135 -4.4914 11 14 7.7690 3.3070 -3.5869 12 1 8.6149 2.3327 -4.3220 13 1 7.8112 4.6202 -4.2790 14 1 8.2813 3.4610 -2.2016 15 6 4.2034 -0.7628 -1.3037 16 8 3.9544 -1.4595 -0.3395 17 6 4.7568 -1.3721 -2.5338 18 6 5.9557 -0.9118 -3.0875 19 6 6.4388 -1.5126 -4.2346 20 17 7.9292 -0.9560 -4.9293 21 7 5.7808 -2.4997 -4.8121 22 6 4.6457 -2.9615 -4.3281 23 6 4.0911 -2.4216 -3.1797 24 9 2.9265 -2.9002 -2.6898 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.6886 1.8464 0.8900 29 1 1.6886 1.8464 -0.8900 30 1 3.8515 0.5683 0.8409 31 1 3.9785 2.1765 0.0890 32 1 3.9672 0.7887 -3.3381 33 1 3.4848 2.2359 -2.4209 34 1 5.4612 3.5762 -5.2245 35 1 6.4982 -0.1015 -2.6231 36 1 4.1408 -3.7710 -4.8341 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000931895402.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:07:31 Heat of formation + Delta-G solvation = -88.208621 kcal Electronic energy + Delta-G solvation = -25083.725425 eV Core-core repulsion = 21123.140010 eV Total energy + Delta-G solvation = -3960.585415 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 316.078 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -48.73045 -40.16461 -38.82298 -37.36305 -36.27316 -35.16262 -32.92648 -32.44766 -30.38323 -29.73471 -27.29562 -26.16771 -24.67804 -23.45299 -23.13530 -22.14043 -19.33485 -17.51529 -17.28440 -17.05487 -16.58494 -16.20400 -16.13449 -15.62126 -15.24153 -15.11069 -14.57396 -14.44398 -14.13647 -13.83931 -13.64049 -13.52448 -12.88577 -12.54651 -12.33771 -12.08408 -11.82778 -11.62478 -11.45437 -11.29376 -11.09917 -11.04430 -10.78269 -10.76099 -10.37301 -9.99136 -9.78502 -9.56971 -9.39262 -9.11574 -8.70640 -8.52815 -7.89699 -6.33271 -4.41784 0.91439 1.12887 2.07874 3.14736 3.16394 3.23827 3.25560 3.54064 3.81647 4.11124 4.20465 4.21855 4.59809 4.86852 4.95403 5.03312 5.30972 5.34421 5.42454 5.56257 5.60295 5.62089 5.73829 5.80439 5.83268 5.98552 6.25885 6.27114 6.56556 6.65195 7.02322 7.31111 7.48628 7.57903 7.74256 7.86219 8.10483 8.58603 8.78355 9.25016 10.72593 Molecular weight = 316.08amu Principal moments of inertia in cm(-1) A = 0.011317 B = 0.006912 C = 0.004735 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2473.491441 B = 4049.897132 C = 5912.539604 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.372 6.372 3 C 0.044 3.956 4 C 0.122 3.878 5 N -0.583 5.583 6 C 0.235 3.765 7 C -0.549 4.549 8 H 0.066 0.934 9 C 0.076 3.924 10 N -0.878 5.878 11 Si 0.883 3.117 12 H -0.269 1.269 13 H -0.284 1.284 14 H -0.270 1.270 15 C 0.565 3.435 16 O -0.534 6.534 17 C -0.095 4.095 18 C -0.060 4.060 19 C 0.155 3.845 20 Cl -0.023 7.023 21 N -0.447 5.447 22 C 0.075 3.925 23 C 0.087 3.913 24 F -0.116 7.116 25 H 0.035 0.965 26 H 0.036 0.964 27 H 0.080 0.920 28 H 0.052 0.948 29 H 0.052 0.948 30 H 0.085 0.915 31 H 0.097 0.903 32 H 0.034 0.966 33 H 0.040 0.960 34 H 0.268 0.732 35 H 0.185 0.815 36 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.941 -4.733 2.782 6.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.290 6.290 3 C -0.034 4.034 4 C -0.001 4.001 5 N -0.313 5.313 6 C 0.116 3.884 7 C -0.587 4.587 8 H 0.084 0.916 9 C -0.129 4.129 10 N -0.514 5.514 11 Si 0.709 3.291 12 H -0.194 1.194 13 H -0.209 1.209 14 H -0.195 1.195 15 C 0.351 3.649 16 O -0.412 6.412 17 C -0.107 4.107 18 C -0.080 4.080 19 C -0.009 4.009 20 Cl 0.005 6.995 21 N -0.158 5.158 22 C -0.084 4.084 23 C 0.065 3.935 24 F -0.095 7.095 25 H 0.053 0.947 26 H 0.055 0.945 27 H 0.099 0.901 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.103 0.897 31 H 0.115 0.885 32 H 0.052 0.948 33 H 0.058 0.942 34 H 0.078 0.922 35 H 0.201 0.799 36 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -2.551 -5.440 2.317 6.440 hybrid contribution 0.194 1.229 0.327 1.287 sum -2.357 -4.211 2.644 5.503 Atomic orbital electron populations 1.22675 0.82279 1.02231 0.99261 1.88103 1.18471 1.27233 1.95199 1.23035 0.95139 0.85180 1.00032 1.21402 0.91424 0.99569 0.87698 1.48006 1.63935 1.06451 1.12899 1.19489 0.97356 0.90454 0.81139 1.21425 0.96007 1.32367 1.08877 0.91590 1.24887 0.97737 0.95258 0.95053 1.69902 1.35042 1.35473 1.11002 0.86704 0.84704 0.78912 0.78792 1.19375 1.20910 1.19497 1.17688 0.78325 0.82784 0.86111 1.90754 1.52215 1.61522 1.36679 1.20445 0.96413 0.96234 0.97591 1.22663 0.94747 0.97141 0.93494 1.21463 0.91628 0.94670 0.93134 1.98400 1.29302 1.87126 1.84671 1.66807 1.06863 1.10903 1.31223 1.22526 0.92212 1.00592 0.93077 1.18814 0.84317 0.95256 0.95145 1.91554 1.44357 1.86515 1.87058 0.94689 0.94548 0.90111 0.93014 0.93002 0.89687 0.88484 0.94827 0.94222 0.92200 0.79857 0.80767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 11.01 101.05 1.11 1.54 16 2 O -0.37 -6.57 9.96 -35.39 -0.35 -6.92 16 3 C 0.04 0.69 6.28 37.16 0.23 0.92 16 4 C 0.12 2.12 5.83 -4.04 -0.02 2.09 16 5 N -0.58 -11.84 2.41 -176.12 -0.43 -12.26 16 6 C 0.24 5.24 4.75 -5.19 -0.02 5.22 16 7 C -0.55 -12.76 6.47 -34.44 -0.22 -12.98 16 8 H 0.07 1.52 7.26 -52.49 -0.38 1.14 16 9 C 0.08 1.85 5.46 -17.82 -0.10 1.75 16 10 N -0.88 -22.65 13.29 55.43 0.74 -21.91 16 11 Si 0.88 19.01 29.54 -169.99 -5.02 13.99 16 12 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 13 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 14 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 15 C 0.57 12.03 6.71 -12.26 -0.08 11.94 16 16 O -0.53 -12.32 16.08 5.18 0.08 -12.24 16 17 C -0.09 -1.89 4.47 -104.60 -0.47 -2.36 16 18 C -0.06 -1.17 7.77 -38.99 -0.30 -1.47 16 19 C 0.15 2.88 7.26 -17.52 -0.13 2.75 16 20 Cl -0.02 -0.41 29.10 -51.86 -1.51 -1.92 16 21 N -0.45 -7.85 10.31 -10.36 -0.11 -7.96 16 22 C 0.08 1.19 11.17 -17.49 -0.20 1.00 16 23 C 0.09 1.58 7.33 -38.80 -0.28 1.29 16 24 F -0.12 -2.14 16.85 2.25 0.04 -2.10 16 25 H 0.03 0.39 8.14 -51.93 -0.42 -0.03 16 26 H 0.04 0.45 8.14 -51.92 -0.42 0.03 16 27 H 0.08 0.99 8.14 -51.93 -0.42 0.57 16 28 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 29 H 0.05 0.83 8.11 -51.93 -0.42 0.40 16 30 H 0.08 1.50 7.33 -51.93 -0.38 1.12 16 31 H 0.10 1.53 8.11 -51.93 -0.42 1.11 16 32 H 0.03 0.82 6.75 -51.93 -0.35 0.47 16 33 H 0.04 0.92 8.04 -51.93 -0.42 0.50 16 34 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 35 H 0.18 3.74 5.23 -52.48 -0.27 3.46 16 36 H 0.18 2.06 8.06 -52.49 -0.42 1.64 16 LS Contribution 333.14 15.07 5.02 5.02 Total: -1.00 -28.15 333.14 -5.91 -34.06 By element: Atomic # 1 Polarization: 4.43 SS G_CDS: -3.90 Total: 0.54 kcal Atomic # 6 Polarization: 12.19 SS G_CDS: -0.48 Total: 11.71 kcal Atomic # 7 Polarization: -42.34 SS G_CDS: 0.20 Total: -42.13 kcal Atomic # 8 Polarization: -18.89 SS G_CDS: -0.27 Total: -19.16 kcal Atomic # 9 Polarization: -2.14 SS G_CDS: 0.04 Total: -2.10 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.02 Total: 13.99 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.51 Total: -1.92 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -28.15 -5.91 -34.06 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000931895402.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.145 kcal (2) G-P(sol) polarization free energy of solvation -28.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.295 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.209 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds