Wall clock time and date at job start Tue Mar 31 2020 10:40:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37939 * 120.06791 * 2 1 4 4 C 1.38384 * 120.18521 * 180.27562 * 3 2 1 5 5 C 1.38318 * 120.31565 * 359.48044 * 4 3 2 6 6 C 1.38106 * 120.13472 * 0.26193 * 5 4 3 7 7 Cl 1.73600 * 120.09124 * 180.02562 * 6 5 4 8 8 C 1.39607 * 120.07263 * 179.76208 * 2 1 3 9 9 C 1.47730 * 120.15388 * 359.95624 * 8 2 1 10 10 O 1.21560 * 120.00360 * 270.02811 * 9 8 2 11 11 N 1.34778 * 119.99780 * 90.02414 * 9 8 2 12 12 C 1.39382 * 120.00235 * 175.30185 * 11 9 8 13 13 C 1.38618 * 119.58718 * 186.38645 * 12 11 9 14 14 C 1.40799 * 118.79944 * 179.97438 * 13 12 11 15 15 C 1.41546 * 120.99817 * 179.97438 * 14 13 12 16 16 H 1.07995 * 119.99678 * 201.18682 * 15 14 13 17 17 C 1.40033 * 119.99613 * 21.19125 * 15 14 13 18 18 N 1.30735 * 120.00557 * 12.81378 * 17 15 14 19 19 Si 1.86806 * 119.99612 * 192.81504 * 17 15 14 20 20 H 1.48495 * 109.46994 * 89.99728 * 19 17 15 21 21 H 1.48499 * 109.47055 * 209.99763 * 19 17 15 22 22 H 1.48505 * 109.47012 * 330.00053 * 19 17 15 23 23 C 1.41180 * 118.00675 * 0.02562 * 14 13 12 24 24 C 1.37588 * 119.02094 * 359.97438 * 23 14 13 25 25 N 1.32088 * 121.11081 * 359.74735 * 24 23 14 26 26 H 1.08998 * 109.46918 * 270.23785 * 1 2 3 27 27 H 1.09000 * 109.46733 * 30.24166 * 1 2 3 28 28 H 1.08999 * 109.46688 * 150.23706 * 1 2 3 29 29 H 1.07997 * 119.91016 * 0.03501 * 3 2 1 30 30 H 1.07999 * 119.84287 * 179.76457 * 4 3 2 31 31 H 1.08004 * 119.93135 * 180.23499 * 5 4 3 32 32 H 0.96998 * 119.99894 * 355.30331 * 11 9 8 33 33 H 1.08004 * 120.60048 * 0.02562 * 13 12 11 34 34 H 0.97000 * 120.00350 * 180.02562 * 18 17 15 35 35 H 1.07998 * 120.48886 * 180.02562 * 23 14 13 36 36 H 1.07995 * 119.44604 * 179.97438 * 24 23 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1938 0.0000 4 6 3.5819 1.1966 -0.0058 5 6 4.2826 0.0040 -0.0007 6 6 3.6040 -1.1988 0.0046 7 17 4.4845 -2.6949 0.0116 8 6 2.2065 -1.2081 0.0050 9 6 1.4730 -2.4904 0.0113 10 8 1.1714 -3.0130 1.0666 11 7 1.1380 -3.0808 -1.1530 12 6 0.5334 -4.3367 -1.1490 13 6 0.3135 -4.9943 -2.3493 14 6 -0.2979 -6.2624 -2.3260 15 6 -0.5449 -6.9747 -3.5239 16 1 -1.2934 -7.7530 -3.5447 17 6 0.1812 -6.6703 -4.6819 18 7 1.2472 -5.9173 -4.6061 19 14 -0.3733 -7.3404 -6.3351 20 1 -1.3108 -6.3792 -6.9695 21 1 0.8088 -7.5318 -7.2133 22 1 -1.0588 -8.6427 -6.1367 23 6 -0.6582 -6.8016 -1.0719 24 6 -0.3996 -6.0739 0.0668 25 7 0.1811 -4.8893 0.0024 26 1 -0.3633 0.0043 1.0276 27 1 -0.3633 0.8878 -0.5176 28 1 -0.3633 -0.8921 -0.5102 29 1 1.6577 2.1288 0.0006 30 1 4.1174 2.1345 -0.0096 31 1 5.3626 0.0135 -0.0014 32 1 1.3177 -2.6318 -1.9938 33 1 0.6066 -4.5424 -3.2855 34 1 1.7500 -5.7061 -5.4083 35 1 -1.1290 -7.7714 -1.0073 36 1 -0.6727 -6.4797 1.0296 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001435478792.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:04 Heat of formation + Delta-G solvation = 17.403131 kcal Electronic energy + Delta-G solvation = -23026.294229 eV Core-core repulsion = 19501.057709 eV Total energy + Delta-G solvation = -3525.236521 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 316.072 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.26991 -38.85225 -37.48601 -36.49382 -34.34391 -33.74456 -32.91279 -31.19055 -30.48967 -28.52843 -27.22969 -26.02083 -24.04308 -22.05978 -21.89985 -21.27912 -19.77391 -17.75844 -17.65214 -16.30107 -16.14348 -15.77372 -15.35781 -14.92988 -14.18764 -14.05855 -14.01044 -13.92305 -13.65238 -13.42903 -12.87081 -12.82113 -12.61784 -12.60381 -12.22334 -11.74870 -11.56358 -11.42438 -11.33742 -11.20264 -10.91499 -10.87899 -10.29743 -10.14989 -9.78427 -9.54460 -9.40081 -8.94863 -8.79783 -8.01159 -7.75515 -7.02651 -6.77270 -4.64023 0.87775 1.01642 2.08622 2.49841 2.78104 3.00472 3.03910 3.17729 3.30445 3.40787 3.62891 3.83166 4.54705 4.63815 4.67415 4.81281 5.02398 5.10483 5.24543 5.52958 5.55023 5.57508 5.69341 5.92123 5.99158 6.03624 6.08749 6.25811 6.55819 6.57064 6.65372 6.80542 6.93709 7.14295 7.38708 7.45969 7.75228 7.93745 8.18703 8.40696 8.68094 8.74688 8.83807 9.68882 10.05312 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.016197 B = 0.003832 C = 0.003657 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1728.313454 B = 7305.967250 C = 7655.697367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.040 4.040 3 C -0.121 4.121 4 C -0.094 4.094 5 C -0.121 4.121 6 C -0.003 4.003 7 Cl -0.050 7.050 8 C -0.113 4.113 9 C 0.551 3.449 10 O -0.464 6.464 11 N -0.647 5.647 12 C 0.336 3.664 13 C -0.244 4.244 14 C 0.139 3.861 15 C -0.450 4.450 16 H 0.082 0.918 17 C 0.075 3.925 18 N -0.789 5.789 19 Si 0.914 3.086 20 H -0.267 1.267 21 H -0.277 1.277 22 H -0.261 1.261 23 C -0.284 4.284 24 C 0.118 3.882 25 N -0.554 5.554 26 H 0.080 0.920 27 H 0.075 0.925 28 H 0.073 0.927 29 H 0.133 0.867 30 H 0.134 0.866 31 H 0.137 0.863 32 H 0.408 0.592 33 H 0.139 0.861 34 H 0.282 0.718 35 H 0.101 0.899 36 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.266 14.153 2.259 14.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.040 4.040 3 C -0.139 4.139 4 C -0.112 4.112 5 C -0.139 4.139 6 C -0.031 4.031 7 Cl -0.020 7.020 8 C -0.117 4.117 9 C 0.334 3.666 10 O -0.333 6.333 11 N -0.292 5.292 12 C 0.111 3.889 13 C -0.269 4.269 14 C 0.131 3.869 15 C -0.481 4.481 16 H 0.100 0.900 17 C -0.143 4.143 18 N -0.415 5.415 19 Si 0.738 3.262 20 H -0.192 1.192 21 H -0.202 1.202 22 H -0.185 1.185 23 C -0.308 4.308 24 C -0.036 4.036 25 N -0.273 5.273 26 H 0.099 0.901 27 H 0.093 0.907 28 H 0.092 0.908 29 H 0.151 0.849 30 H 0.152 0.848 31 H 0.155 0.845 32 H 0.243 0.757 33 H 0.156 0.844 34 H 0.093 0.907 35 H 0.120 0.880 36 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.521 14.218 3.713 15.374 hybrid contribution 0.054 -0.692 -2.020 2.136 sum 4.575 13.526 1.693 14.379 Atomic orbital electron populations 1.20911 0.89956 1.03565 1.03467 1.19934 0.96569 0.91065 0.96481 1.21056 0.94237 0.97486 1.01132 1.21195 0.94136 0.97638 0.98235 1.20988 1.00596 0.90394 1.01971 1.20980 0.91014 0.88506 1.02561 1.98427 1.75276 1.31828 1.96501 1.19974 0.92092 0.94793 1.04846 1.18038 0.79911 0.83767 0.84923 1.90896 1.49981 1.62380 1.30041 1.43372 1.59237 1.17931 1.08681 1.18177 0.94666 0.84977 0.91050 1.21805 1.11885 0.97140 0.96089 1.17580 0.87276 0.89906 0.92153 1.19624 1.18349 1.16959 0.93188 0.90012 1.25979 0.93270 0.93686 1.01387 1.69735 1.11934 1.28842 1.30978 0.86209 0.79156 0.80307 0.80481 1.19182 1.20174 1.18489 1.21880 1.13722 1.01634 0.93574 1.21741 0.95005 0.90045 0.96816 1.67209 1.19908 1.13684 1.26548 0.90108 0.90659 0.90821 0.84921 0.84826 0.84534 0.75698 0.84373 0.90724 0.88035 0.85921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.46 9.62 36.00 0.35 -1.11 16 2 C -0.04 -0.51 5.91 -104.22 -0.62 -1.13 16 3 C -0.12 -1.20 9.69 -39.64 -0.38 -1.58 16 4 C -0.09 -0.86 10.04 -39.50 -0.40 -1.26 16 5 C -0.12 -1.34 9.82 -39.60 -0.39 -1.73 16 6 C 0.00 -0.05 6.35 -39.07 -0.25 -0.29 16 7 Cl -0.05 -0.80 28.04 -51.86 -1.45 -2.26 16 8 C -0.11 -1.79 5.64 -104.95 -0.59 -2.38 16 9 C 0.55 10.99 4.73 -12.38 -0.06 10.93 16 10 O -0.46 -11.13 15.36 5.31 0.08 -11.04 16 11 N -0.65 -13.19 5.38 -12.39 -0.07 -13.26 16 12 C 0.34 8.21 7.41 -154.77 -1.15 7.06 16 13 C -0.24 -6.21 8.66 -38.47 -0.33 -6.54 16 14 C 0.14 3.66 5.65 -106.55 -0.60 3.06 16 15 C -0.45 -11.52 9.15 -37.65 -0.34 -11.87 16 16 H 0.08 2.00 7.88 -52.49 -0.41 1.59 16 17 C 0.08 1.81 5.30 -17.35 -0.09 1.71 16 18 N -0.79 -19.35 10.54 55.55 0.59 -18.77 16 19 Si 0.91 17.84 29.58 -169.99 -5.03 12.81 16 20 H -0.27 -5.13 7.11 56.52 0.40 -4.72 16 21 H -0.28 -5.30 7.11 56.52 0.40 -4.90 16 22 H -0.26 -5.06 7.11 56.52 0.40 -4.66 16 23 C -0.28 -7.00 9.90 -38.70 -0.38 -7.38 16 24 C 0.12 2.86 11.15 -17.68 -0.20 2.66 16 25 N -0.55 -14.25 7.85 -12.54 -0.10 -14.35 16 26 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 27 H 0.07 0.67 8.09 -51.93 -0.42 0.25 16 28 H 0.07 1.04 7.08 -51.93 -0.37 0.67 16 29 H 0.13 0.93 8.06 -52.49 -0.42 0.50 16 30 H 0.13 0.80 8.06 -52.49 -0.42 0.37 16 31 H 0.14 1.21 8.06 -52.48 -0.42 0.79 16 32 H 0.41 7.16 8.68 -40.82 -0.35 6.81 16 33 H 0.14 3.50 5.83 -52.48 -0.31 3.20 16 34 H 0.28 6.25 8.29 -40.82 -0.34 5.92 16 35 H 0.10 2.29 8.06 -52.49 -0.42 1.87 16 36 H 0.12 2.60 8.06 -52.49 -0.42 2.18 16 LS Contribution 331.37 15.07 4.99 4.99 Total: -1.00 -31.37 331.37 -9.96 -41.33 By element: Atomic # 1 Polarization: 13.92 SS G_CDS: -3.53 Total: 10.38 kcal Atomic # 6 Polarization: -4.40 SS G_CDS: -5.44 Total: -9.84 kcal Atomic # 7 Polarization: -46.80 SS G_CDS: 0.42 Total: -46.38 kcal Atomic # 8 Polarization: -11.13 SS G_CDS: 0.08 Total: -11.04 kcal Atomic # 14 Polarization: 17.84 SS G_CDS: -5.03 Total: 12.81 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.45 Total: -2.26 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -31.37 -9.96 -41.33 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001435478792.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.731 kcal (2) G-P(sol) polarization free energy of solvation -31.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.328 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds